FFCP PHASE1:Hg19::chrX:135863036..135863078,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=424bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |association_with_transcript=424bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | ||
|cluster_id=chrX:135863036..135863078,- | |||
|coexpression_cluster_id=C1020 | |coexpression_cluster_id=C1020 | ||
|description=CAGE_peak_1_at_ARHGEF6_5end | |description=CAGE_peak_1_at_ARHGEF6_5end | ||
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|ontology_enrichment_celltype_v019=CL:0000084;1.04e-18;25!CL:0000542;1.07e-15;53!CL:0000791;4.15e-15;18!CL:0000789;4.15e-15;18!CL:0002419;4.15e-15;18!CL:0002087;9.07e-15;104!CL:0000738;4.25e-14;136!CL:0000763;6.58e-14;100!CL:0000766;1.62e-13;69!CL:0000988;3.11e-13;177!CL:0000576;4.78e-13;48!CL:0000860;1.16e-11;33!CL:0002057;1.16e-11;33!CL:0000473;1.42e-11;39!CL:0000234;1.42e-11;39!CL:0000625;6.97e-10;11!CL:0000236;2.65e-08;13!CL:0000945;5.38e-08;24!CL:0000094;4.67e-07;8 | |ontology_enrichment_celltype_v019=CL:0000084;1.04e-18;25!CL:0000542;1.07e-15;53!CL:0000791;4.15e-15;18!CL:0000789;4.15e-15;18!CL:0002419;4.15e-15;18!CL:0002087;9.07e-15;104!CL:0000738;4.25e-14;136!CL:0000763;6.58e-14;100!CL:0000766;1.62e-13;69!CL:0000988;3.11e-13;177!CL:0000576;4.78e-13;48!CL:0000860;1.16e-11;33!CL:0002057;1.16e-11;33!CL:0000473;1.42e-11;39!CL:0000234;1.42e-11;39!CL:0000625;6.97e-10;11!CL:0000236;2.65e-08;13!CL:0000945;5.38e-08;24!CL:0000094;4.67e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,6.33e-83,168;CL:0002032,2.99e-77,161;CL:0000837,2.99e-77,161;CL:0000988,2.72e-75,177;CL:0000738,2.39e-66,136;CL:0002031,1.27e-55,120;CL:0002087,3.16e-52,115;CL:0000763,1.02e-45,108;CL:0000049,1.02e-45,108;CL:0000766,1.17e-31,72;CL:0000557,3.67e-27,67;CL:0000839,4.73e-27,66;CL:0000542,6.43e-27,53;CL:0000051,6.43e-27,53;CL:0000838,1.99e-26,52;CL:0002009,1.74e-22,61;CL:0002194,5.06e-22,59;CL:0000576,5.06e-22,59;CL:0000040,5.06e-22,59;CL:0000559,5.06e-22,59;CL:0000473,3.31e-19,48;CL:0000234,3.31e-19,48;CL:0000084,1.12e-18,25;CL:0000827,1.12e-18,25;CL:0000860,3.66e-17,42;CL:0002057,3.66e-17,42;CL:0000791,4.19e-15,18;CL:0000789,4.19e-15,18;CL:0002420,4.19e-15,18;CL:0002419,4.19e-15,18;CL:0000790,4.19e-15,18;CL:0000134,2.46e-14,354;CL:0002320,4.13e-13,361;CL:0000219,5.94e-10,386;CL:0000625,7.00e-10,11;CL:0000236,1.28e-08,14;CL:0000945,5.20e-08,24;CL:0000826,5.20e-08,24;CL:0000048,9.26e-08,427;CL:0000034,3.05e-07,441;CL:0000723,4.47e-07,433;CL:0000094,4.70e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000051;1.07e-15;53!CL:0000790;4.15e-15;18!CL:0000049;8.86e-13;108!CL:0002057;1.18e-12;42 | |ontology_enrichment_development_v019=CL:0000051;1.07e-15;53!CL:0000790;4.15e-15;18!CL:0000049;8.86e-13;108!CL:0002057;1.18e-12;42 | ||
|ontology_enrichment_disease=DOID:1240!8.04e-15!39;DOID:2531!1.55e-13!51;DOID:0060083!1.55e-13!51;DOID:8692!8.28e-11!31 | |ontology_enrichment_disease=DOID:1240!8.04e-15!39;DOID:2531!1.55e-13!51;DOID:0060083!1.55e-13!51;DOID:8692!8.28e-11!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.79e-13;39!DOID:8692;2.16e-12;31!DOID:2531;3.45e-10;51!DOID:0060083;3.45e-10;51 | |ontology_enrichment_disease_v019=DOID:1240;1.79e-13;39!DOID:8692;2.16e-12;31!DOID:2531;3.45e-10;51!DOID:0060083;3.45e-10;51 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,9.14e-18,39;DOID:2531,2.42e-16,51;DOID:0060083,2.42e-16,51;DOID:8692,5.06e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.51e-25!102;UBERON:0003061!2.51e-25!102;UBERON:0002193!9.77e-24!112;UBERON:0002371!3.11e-18!80;UBERON:0001474!2.70e-16!86;UBERON:0002384!8.94e-16!375;UBERON:0007023!8.27e-15!115;UBERON:0002405!4.71e-14!115;UBERON:0004765!1.22e-10!101;UBERON:0001434!1.22e-10!101 | |ontology_enrichment_uberon=UBERON:0002390!2.51e-25!102;UBERON:0003061!2.51e-25!102;UBERON:0002193!9.77e-24!112;UBERON:0002371!3.11e-18!80;UBERON:0001474!2.70e-16!86;UBERON:0002384!8.94e-16!375;UBERON:0007023!8.27e-15!115;UBERON:0002405!4.71e-14!115;UBERON:0004765!1.22e-10!101;UBERON:0001434!1.22e-10!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.80e-07;15!UBERON:0000179;7.80e-07;15!UBERON:0000463;7.80e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;7.80e-07;15!UBERON:0000179;7.80e-07;15!UBERON:0000463;7.80e-07;15 | ||
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| ||
|short_description=p1@ARHGEF6 | |short_description=p1@ARHGEF6 | ||
}} | }} |
Latest revision as of 15:20, 19 September 2015
Short description: | p1@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF6_5end |
Coexpression cluster: | C1020_Mast_CD4_acute_chronic_CD8_thymus_Peripheral |
Association with transcript: | 424bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.05e-33 | 98 |
blood island | 6.05e-33 | 98 |
hemolymphoid system | 1.06e-29 | 108 |
bone marrow | 7.63e-24 | 76 |
immune system | 7.83e-24 | 93 |
bone element | 9.26e-22 | 82 |
skeletal element | 1.17e-17 | 90 |
skeletal system | 4.47e-14 | 100 |
connective tissue | 3.41e-13 | 371 |
adult organism | 2.50e-10 | 114 |
blood | 7.94e-07 | 15 |
haemolymphatic fluid | 7.94e-07 | 15 |
organism substance | 7.94e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.14e-18 | 39 |
hematologic cancer | 2.42e-16 | 51 |
immune system cancer | 2.42e-16 | 51 |
myeloid leukemia | 5.06e-13 | 31 |