FFCP PHASE1:Hg19::chr1:8877692..8877732,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2R6 | |UniProt=Q9P2R6 | ||
|association_with_transcript=0bp_to_ENST00000400908,NM_001042681,NM_012102,uc001ape.2,uc001apf.2_5end | |association_with_transcript=0bp_to_ENST00000400908,NM_001042681,NM_012102,uc001ape.2,uc001apf.2_5end | ||
|cluster_id=chr1:8877692..8877732,- | |||
|description=CAGE_peak_1_at_RERE_5end | |description=CAGE_peak_1_at_RERE_5end | ||
|id=chr1:8877692..8877732,- | |id=chr1:8877692..8877732,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.41e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.36e-33!115;UBERON:0001049!1.77e-28!57;UBERON:0005068!1.77e-28!57;UBERON:0006241!1.77e-28!57;UBERON:0007135!1.77e-28!57;UBERON:0001017!7.39e-26!82;UBERON:0005743!4.88e-25!86;UBERON:0000073!6.78e-25!94;UBERON:0001016!6.78e-25!94;UBERON:0002616!1.17e-23!59;UBERON:0002346!7.71e-23!90;UBERON:0000955!3.00e-22!69;UBERON:0006238!3.00e-22!69;UBERON:0003080!4.58e-22!42;UBERON:0002780!8.81e-22!41;UBERON:0001890!8.81e-22!41;UBERON:0006240!8.81e-22!41;UBERON:0003075!4.07e-21!86;UBERON:0007284!4.07e-21!86;UBERON:0002020!6.29e-18!34;UBERON:0003528!6.29e-18!34;UBERON:0001893!9.06e-18!34;UBERON:0002791!2.36e-17!33;UBERON:0001869!1.54e-16!32;UBERON:0003056!4.71e-16!61;UBERON:0000924!1.42e-14!173;UBERON:0006601!1.42e-14!173;UBERON:0002619!1.18e-13!22;UBERON:0004121!2.70e-13!169;UBERON:0000956!5.26e-13!25;UBERON:0000203!5.26e-13!25;UBERON:0001950!1.64e-12!20;UBERON:0000025!2.89e-12!194;UBERON:0000153!4.86e-12!129;UBERON:0007811!4.86e-12!129;UBERON:0004111!1.58e-11!241;UBERON:0000033!7.74e-11!123;UBERON:0000477!3.70e-09!286;UBERON:0003076!1.40e-07!15;UBERON:0003057!1.40e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.25e-16;41!UBERON:0001890;4.25e-16;41!UBERON:0000073;1.92e-15;53!UBERON:0002616;1.92e-15;53!UBERON:0003528;2.32e-15;34!UBERON:0002020;2.32e-15;34!UBERON:0001893;3.03e-15;34!UBERON:0002791;3.42e-15;32!UBERON:0001869;4.44e-15;32!UBERON:0002619;1.00e-13;22!UBERON:0000956;4.59e-13;25!UBERON:0000203;4.59e-13;25!UBERON:0001950;1.39e-12;20!UBERON:0000955;1.10e-10;68!UBERON:0001016;4.03e-10;83!UBERON:0007023;4.21e-10;114!UBERON:0001017;4.25e-10;75!UBERON:0000922;1.49e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.99e-33,114;UBERON:0001049,3.53e-28,56;UBERON:0005068,3.53e-28,56;UBERON:0006241,3.53e-28,56;UBERON:0007135,3.53e-28,56;UBERON:0000073,2.04e-26,53;UBERON:0002616,2.04e-26,53;UBERON:0001017,1.57e-25,81;UBERON:0001016,2.78e-25,89;UBERON:0002346,3.61e-24,86;UBERON:0003075,2.07e-22,82;UBERON:0007284,2.07e-22,82;UBERON:0000955,6.24e-22,68;UBERON:0006238,6.24e-22,68;UBERON:0002780,8.81e-22,41;UBERON:0001890,8.81e-22,41;UBERON:0003080,8.81e-22,41;UBERON:0006240,8.81e-22,41;UBERON:0003528,6.28e-18,34;UBERON:0002020,6.28e-18,34;UBERON:0001893,9.06e-18,34;UBERON:0002791,1.01e-16,32;UBERON:0001869,1.54e-16,32;UBERON:0003056,2.45e-16,61;UBERON:0010371,4.43e-16,104;UBERON:0011216,2.95e-15,223;UBERON:0004121,3.67e-14,171;UBERON:0000924,3.67e-14,171;UBERON:0006601,3.67e-14,171;UBERON:0002619,1.18e-13,22;UBERON:0000956,5.26e-13,25;UBERON:0000203,5.26e-13,25;UBERON:0001950,1.64e-12,20;UBERON:0000025,3.09e-12,192;UBERON:0004111,2.45e-11,240;UBERON:0010314,2.29e-10,132;UBERON:0003076,1.40e-07,15;UBERON:0003057,1.40e-07,15 | |||
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| ||
|short_description=p1@RERE | |short_description=p1@RERE | ||
}} | }} |
Latest revision as of 15:39, 19 September 2015
Short description: | p1@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000400908, NM_001042681, NM_012102, uc001ape.2, uc001apf.2_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | Q9P2R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data