FFCP PHASE1:Hg19::chr17:36861496..36861586,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:36861496..36861586,+
|short_description=p1@MLLT6
|description=CAGE_peak_1_at_MLLT6_5end
|association_with_transcript=-208bp_to_ENST00000325718,ENST0000037...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4302 | |EntrezGene=4302 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7138 | |HGNC=7138 | ||
|TSSclassifier=strong | |||
|UniProt=P55198,E9PEP1 | |UniProt=P55198,E9PEP1 | ||
|association_with_transcript=-208bp_to_ENST00000325718,ENST00000378137_5end | |||
|cluster_id=chr17:36861496..36861586,+ | |||
|description=CAGE_peak_1_at_MLLT6_5end | |||
|id=chr17:36861496..36861586,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.56e-08!18;CL:0000789!1.56e-08!18;CL:0002420!1.56e-08!18;CL:0002419!1.56e-08!18;CL:0000790!1.56e-08!18;CL:0000084!8.48e-08!25;CL:0000827!8.48e-08!25;CL:0000838!1.92e-07!52;CL:0000542!2.07e-07!53;CL:0000051!2.07e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.59e-08;18!CL:0000789;1.59e-08;18!CL:0002419;1.59e-08;18!CL:0000084;1.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.56e-08,18;CL:0000789,1.56e-08,18;CL:0002420,1.56e-08,18;CL:0002419,1.56e-08,18;CL:0000790,1.56e-08,18;CL:0000084,8.48e-08,25;CL:0000827,8.48e-08,25;CL:0000838,1.92e-07,52;CL:0000542,2.07e-07,53;CL:0000051,2.07e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.59e-08;18!UBERON:0006601;6.47e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.60e-38!115;UBERON:0001049!3.83e-17!57;UBERON:0005068!3.83e-17!57;UBERON:0006241!3.83e-17!57;UBERON:0007135!3.83e-17!57;UBERON:0003075!1.02e-13!86;UBERON:0007284!1.02e-13!86;UBERON:0002346!1.09e-13!90;UBERON:0000955!3.40e-13!69;UBERON:0006238!3.40e-13!69;UBERON:0003080!3.78e-13!42;UBERON:0002780!1.17e-12!41;UBERON:0001890!1.17e-12!41;UBERON:0006240!1.17e-12!41;UBERON:0002616!2.51e-12!59;UBERON:0000073!1.06e-11!94;UBERON:0001016!1.06e-11!94;UBERON:0005743!4.12e-11!86;UBERON:0001017!6.57e-11!82;UBERON:0002020!5.08e-10!34;UBERON:0003528!5.08e-10!34;UBERON:0001893!1.25e-09!34;UBERON:0002791!1.73e-09!33;UBERON:0003056!2.18e-09!61;UBERON:0001869!1.12e-08!32;UBERON:0002619!4.95e-08!22;UBERON:0000153!5.83e-08!129;UBERON:0007811!5.83e-08!129;UBERON:0001950!3.01e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.91e-10;114!UBERON:0002780;1.25e-09;41!UBERON:0001890;1.25e-09;41!UBERON:0000073;4.71e-09;53!UBERON:0002616;4.71e-09;53!UBERON:0003528;3.65e-08;34!UBERON:0002020;3.65e-08;34!UBERON:0001893;4.89e-08;34!UBERON:0002791;6.01e-08;32!UBERON:0002619;6.63e-08;22!UBERON:0001869;1.15e-07;32!UBERON:0001950;3.83e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.45e-38,114;UBERON:0001049,1.21e-16,56;UBERON:0005068,1.21e-16,56;UBERON:0006241,1.21e-16,56;UBERON:0007135,1.21e-16,56;UBERON:0000073,2.16e-15,53;UBERON:0002616,2.16e-15,53;UBERON:0003075,6.37e-13,82;UBERON:0007284,6.37e-13,82;UBERON:0002346,6.79e-13,86;UBERON:0000955,9.39e-13,68;UBERON:0006238,9.39e-13,68;UBERON:0002780,1.17e-12,41;UBERON:0001890,1.17e-12,41;UBERON:0003080,1.17e-12,41;UBERON:0006240,1.17e-12,41;UBERON:0001016,4.28e-11,89;UBERON:0001017,1.62e-10,81;UBERON:0003528,5.08e-10,34;UBERON:0002020,5.08e-10,34;UBERON:0001893,1.25e-09,34;UBERON:0003056,4.09e-09,61;UBERON:0002791,4.77e-09,32;UBERON:0011216,5.78e-09,223;UBERON:0001869,1.12e-08,32;UBERON:0002619,4.95e-08,22;UBERON:0010371,1.22e-07,104;UBERON:0001950,3.01e-07,20 | |||
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| ||
|short_description=p1@MLLT6 | |||
}} | }} |
Latest revision as of 20:01, 19 September 2015
Short description: | p1@MLLT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MLLT6_5end |
Coexpression cluster: | NA |
Association with transcript: | -208bp_to_ENST00000325718, ENST00000378137_5end |
EntrezGene: | MLLT6 |
HGNC: | 7138 |
UniProt: | P55198E9PEP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.56e-08 | 18 |
alpha-beta T cell | 1.56e-08 | 18 |
immature T cell | 1.56e-08 | 18 |
mature T cell | 1.56e-08 | 18 |
immature alpha-beta T cell | 1.56e-08 | 18 |
T cell | 8.48e-08 | 25 |
pro-T cell | 8.48e-08 | 25 |
lymphoid lineage restricted progenitor cell | 1.92e-07 | 52 |
lymphocyte | 2.07e-07 | 53 |
common lymphoid progenitor | 2.07e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.45e-38 | 114 |
neural tube | 1.21e-16 | 56 |
neural rod | 1.21e-16 | 56 |
future spinal cord | 1.21e-16 | 56 |
neural keel | 1.21e-16 | 56 |
regional part of nervous system | 2.16e-15 | 53 |
regional part of brain | 2.16e-15 | 53 |
neural plate | 6.37e-13 | 82 |
presumptive neural plate | 6.37e-13 | 82 |
neurectoderm | 6.79e-13 | 86 |
brain | 9.39e-13 | 68 |
future brain | 9.39e-13 | 68 |
regional part of forebrain | 1.17e-12 | 41 |
forebrain | 1.17e-12 | 41 |
anterior neural tube | 1.17e-12 | 41 |
future forebrain | 1.17e-12 | 41 |
nervous system | 4.28e-11 | 89 |
central nervous system | 1.62e-10 | 81 |
brain grey matter | 5.08e-10 | 34 |
gray matter | 5.08e-10 | 34 |
telencephalon | 1.25e-09 | 34 |
pre-chordal neural plate | 4.09e-09 | 61 |
regional part of telencephalon | 4.77e-09 | 32 |
organ system subdivision | 5.78e-09 | 223 |
cerebral hemisphere | 1.12e-08 | 32 |
regional part of cerebral cortex | 4.95e-08 | 22 |
ecto-epithelium | 1.22e-07 | 104 |
neocortex | 3.01e-07 | 20 |