FFCP PHASE1:Hg19::chr15:91293174..91293188,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=641 | |EntrezGene=641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1058 | |HGNC=1058 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-49bp_to_ENST00000558599_5end | |association_with_transcript=-49bp_to_ENST00000558599_5end | ||
|cluster_id=chr15:91293174..91293188,+ | |||
|description=CAGE_peak_3_at_BLM_5end | |description=CAGE_peak_3_at_BLM_5end | ||
|id=chr15:91293174..91293188,+ | |id=chr15:91293174..91293188,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.04e-32!42;CL:0000860!3.08e-29!45;CL:0002009!4.00e-19!65;CL:0002194!1.02e-18!63;CL:0000576!1.02e-18!63;CL:0000040!1.02e-18!63;CL:0000559!1.02e-18!63;CL:0000557!1.23e-16!71;CL:0000766!7.37e-16!76;CL:0000839!7.58e-16!70;CL:0000738!1.84e-13!140;CL:0000763!6.88e-13!112;CL:0000049!6.88e-13!112;CL:0002087!8.33e-13!119;CL:0002031!1.40e-12!124;CL:0002032!2.85e-11!165;CL:0000837!2.85e-11!165;CL:0000988!4.60e-11!182;CL:0000037!2.93e-10!172;CL:0000566!2.93e-10!172 | |ontology_enrichment_celltype=CL:0002057!4.04e-32!42;CL:0000860!3.08e-29!45;CL:0002009!4.00e-19!65;CL:0002194!1.02e-18!63;CL:0000576!1.02e-18!63;CL:0000040!1.02e-18!63;CL:0000559!1.02e-18!63;CL:0000557!1.23e-16!71;CL:0000766!7.37e-16!76;CL:0000839!7.58e-16!70;CL:0000738!1.84e-13!140;CL:0000763!6.88e-13!112;CL:0000049!6.88e-13!112;CL:0002087!8.33e-13!119;CL:0002031!1.40e-12!124;CL:0002032!2.85e-11!165;CL:0000837!2.85e-11!165;CL:0000988!4.60e-11!182;CL:0000037!2.93e-10!172;CL:0000566!2.93e-10!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.34e-47;33!CL:0002057;6.34e-47;33!CL:0000473;8.42e-30;39!CL:0000234;8.42e-30;39!CL:0000576;2.35e-19;48!CL:0000766;1.24e-13;69!CL:0002087;3.07e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.02e-37,42;CL:0002057,3.02e-37,42;CL:0000473,4.89e-32,48;CL:0000234,4.89e-32,48;CL:0002194,9.56e-25,59;CL:0000576,9.56e-25,59;CL:0000040,9.56e-25,59;CL:0000559,9.56e-25,59;CL:0002009,8.33e-24,61;CL:0000839,1.06e-21,66;CL:0000557,2.56e-21,67;CL:0000766,1.47e-19,72;CL:0000763,1.11e-14,108;CL:0000049,1.11e-14,108;CL:0002087,3.76e-12,115;CL:0000738,4.70e-12,136;CL:0002031,1.83e-11,120;CL:0000988,2.08e-11,177;CL:0002032,1.92e-09,161;CL:0000837,1.92e-09,161;CL:0000037,7.46e-09,168 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-26;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.83e-27!57;UBERON:0005068!3.83e-27!57;UBERON:0006241!3.83e-27!57;UBERON:0007135!3.83e-27!57;UBERON:0002616!1.52e-22!59;UBERON:0002780!2.95e-22!41;UBERON:0001890!2.95e-22!41;UBERON:0006240!2.95e-22!41;UBERON:0001017!3.18e-22!82;UBERON:0003080!1.58e-21!42;UBERON:0000955!2.14e-21!69;UBERON:0006238!2.14e-21!69;UBERON:0005743!1.32e-20!86;UBERON:0000073!1.56e-19!94;UBERON:0001016!1.56e-19!94;UBERON:0003075!2.66e-16!86;UBERON:0007284!2.66e-16!86;UBERON:0002020!3.46e-16!34;UBERON:0003528!3.46e-16!34;UBERON:0001893!3.49e-16!34;UBERON:0002346!5.48e-16!90;UBERON:0007023!1.15e-15!115;UBERON:0002791!4.60e-15!33;UBERON:0001869!5.24e-14!32;UBERON:0002371!1.24e-13!80;UBERON:0002390!1.36e-13!102;UBERON:0003061!1.36e-13!102;UBERON:0003056!1.64e-13!61;UBERON:0001474!6.57e-13!86;UBERON:0002193!4.23e-12!112;UBERON:0002619!1.59e-10!22;UBERON:0004765!2.61e-10!101;UBERON:0001434!2.61e-10!101;UBERON:0002405!2.88e-10!115;UBERON:0001950!3.44e-10!20;UBERON:0000033!3.95e-10!123;UBERON:0000956!4.07e-10!25;UBERON:0000203!4.07e-10!25;UBERON:0000153!9.68e-10!129;UBERON:0007811!9.68e-10!129;UBERON:0001894!4.16e-08!7;UBERON:0006222!4.16e-08!7;UBERON:0002308!4.61e-08!9;UBERON:0000125!4.61e-08!9;UBERON:0000924!2.38e-07!173;UBERON:0006601!2.38e-07!173;UBERON:0004121!2.52e-07!169;UBERON:0003296!4.52e-07!4;UBERON:0010133!4.52e-07!4;UBERON:0000200!5.72e-07!6;UBERON:0003076!7.46e-07!15;UBERON:0003057!7.46e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.59e-11;4!UBERON:0010133;4.59e-11;4!UBERON:0001905;2.72e-10;2!UBERON:0002757;2.72e-10;2!UBERON:0010134;2.72e-10;2!UBERON:0005408;2.72e-10;2!UBERON:0001899;2.72e-10;2!UBERON:0000200;1.57e-07;6!UBERON:0002780;7.63e-07;41!UBERON:0001890;7.63e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.01e-18,98;UBERON:0003061,1.01e-18,98;UBERON:0002371,2.58e-18,76;UBERON:0001474,1.12e-16,82;UBERON:0002193,1.53e-16,108;UBERON:0004765,7.86e-15,90;UBERON:0002405,3.20e-14,93;UBERON:0001434,6.13e-13,100;UBERON:0003296,1.10e-10,4;UBERON:0010133,1.10e-10,4;UBERON:0001905,6.67e-10,2;UBERON:0002757,6.67e-10,2;UBERON:0010134,6.67e-10,2;UBERON:0005408,6.67e-10,2;UBERON:0001899,6.67e-10,2;UBERON:0002780,3.59e-09,41;UBERON:0001890,3.59e-09,41;UBERON:0003080,3.59e-09,41;UBERON:0006240,3.59e-09,41;UBERON:0000073,2.59e-08,53;UBERON:0002616,2.59e-08,53;UBERON:0001049,9.04e-08,56;UBERON:0005068,9.04e-08,56;UBERON:0006241,9.04e-08,56;UBERON:0007135,9.04e-08,56;UBERON:0000200,1.65e-07,6;UBERON:0000955,3.10e-07,68;UBERON:0006238,3.10e-07,68;UBERON:0003056,6.41e-07,61 | |||
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| ||
|short_description=p3@BLM | |short_description=p3@BLM | ||
}} | }} |
Latest revision as of 20:12, 19 September 2015
Short description: | p3@BLM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BLM_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000558599_5end |
EntrezGene: | BLM |
HGNC: | 1058 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.02e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.02e-37 | 42 |
defensive cell | 4.89e-32 | 48 |
phagocyte | 4.89e-32 | 48 |
monopoietic cell | 9.56e-25 | 59 |
monocyte | 9.56e-25 | 59 |
monoblast | 9.56e-25 | 59 |
promonocyte | 9.56e-25 | 59 |
macrophage dendritic cell progenitor | 8.33e-24 | 61 |
myeloid lineage restricted progenitor cell | 1.06e-21 | 66 |
granulocyte monocyte progenitor cell | 2.56e-21 | 67 |
myeloid leukocyte | 1.47e-19 | 72 |
myeloid cell | 1.11e-14 | 108 |
common myeloid progenitor | 1.11e-14 | 108 |
nongranular leukocyte | 3.76e-12 | 115 |
leukocyte | 4.70e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 1.83e-11 | 120 |
hematopoietic cell | 2.08e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.92e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.92e-09 | 161 |
hematopoietic stem cell | 7.46e-09 | 168 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.01e-18 | 98 |
blood island | 1.01e-18 | 98 |
bone marrow | 2.58e-18 | 76 |
bone element | 1.12e-16 | 82 |
hemolymphoid system | 1.53e-16 | 108 |
skeletal element | 7.86e-15 | 90 |
immune system | 3.20e-14 | 93 |
skeletal system | 6.13e-13 | 100 |
gland of diencephalon | 1.10e-10 | 4 |
neuroendocrine gland | 1.10e-10 | 4 |
pineal body | 6.67e-10 | 2 |
regional part of epithalamus | 6.67e-10 | 2 |
secretory circumventricular organ | 6.67e-10 | 2 |
circumventricular organ | 6.67e-10 | 2 |
epithalamus | 6.67e-10 | 2 |
regional part of forebrain | 3.59e-09 | 41 |
forebrain | 3.59e-09 | 41 |
anterior neural tube | 3.59e-09 | 41 |
future forebrain | 3.59e-09 | 41 |
regional part of nervous system | 2.59e-08 | 53 |
regional part of brain | 2.59e-08 | 53 |
neural tube | 9.04e-08 | 56 |
neural rod | 9.04e-08 | 56 |
future spinal cord | 9.04e-08 | 56 |
neural keel | 9.04e-08 | 56 |
gyrus | 1.65e-07 | 6 |
brain | 3.10e-07 | 68 |
future brain | 3.10e-07 | 68 |
pre-chordal neural plate | 6.41e-07 | 61 |