FFCP PHASE1:Hg19::chr18:55712873..55712908,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:55712873..55712908,+
|short_description=p15@NEDD4L
|description=CAGE_peak_15_at_NEDD4L_5end
|association_with_transcript=-20bp_to_uc002lha.1_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23327 | |EntrezGene=23327 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7728 | |HGNC=7728 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-20bp_to_uc002lha.1_5end | |||
|cluster_id=chr18:55712873..55712908,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_15_at_NEDD4L_5end | |||
|id=chr18:55712873..55712908,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;7.59e-14;2!CL:0000540;3.22e-10;6!CL:0000404;3.22e-10;6!CL:0002319;4.83e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,5.66e-20,8;CL:0000540,2.39e-10,6;CL:0000031,2.39e-10,6;CL:0000404,2.39e-10,6;CL:0002319,4.69e-08,25 | |||
|ontology_enrichment_development_v019=CL:0000031;3.22e-10;6!UBERON:0006601;9.22e-10;82!UBERON:0006215;2.09e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.32e-53!86;UBERON:0001017!3.24e-53!82;UBERON:0000073!7.76e-50!94;UBERON:0001016!7.76e-50!94;UBERON:0001049!5.94e-47!57;UBERON:0005068!5.94e-47!57;UBERON:0006241!5.94e-47!57;UBERON:0007135!5.94e-47!57;UBERON:0000955!6.14e-44!69;UBERON:0006238!6.14e-44!69;UBERON:0002616!2.26e-40!59;UBERON:0002780!4.40e-40!41;UBERON:0001890!4.40e-40!41;UBERON:0006240!4.40e-40!41;UBERON:0003080!8.16e-39!42;UBERON:0003075!2.81e-38!86;UBERON:0007284!2.81e-38!86;UBERON:0001893!1.24e-37!34;UBERON:0002020!1.59e-37!34;UBERON:0003528!1.59e-37!34;UBERON:0002791!2.37e-36!33;UBERON:0002346!1.08e-35!90;UBERON:0001869!1.08e-35!32;UBERON:0000956!4.88e-33!25;UBERON:0000203!4.88e-33!25;UBERON:0007023!1.04e-32!115;UBERON:0003056!6.64e-32!61;UBERON:0002619!1.98e-30!22;UBERON:0000153!3.38e-30!129;UBERON:0007811!3.38e-30!129;UBERON:0000033!3.32e-29!123;UBERON:0004121!3.46e-28!169;UBERON:0001950!8.20e-28!20;UBERON:0000924!5.68e-27!173;UBERON:0006601!5.68e-27!173;UBERON:0001871!2.95e-11!7;UBERON:0000025!7.81e-11!194;UBERON:0003076!2.04e-09!15;UBERON:0003057!2.04e-09!15;UBERON:0000200!1.85e-08!6;UBERON:0000483!2.02e-08!309;UBERON:0000477!2.30e-08!286;UBERON:0001872!2.74e-08!5;UBERON:0000119!3.81e-08!312;UBERON:0000349!3.86e-08!5;UBERON:0004111!8.77e-08!241;UBERON:0002021!8.79e-08!5;UBERON:0002298!1.11e-07!8;UBERON:0000062!1.70e-07!511;UBERON:0000475!1.79e-07!365;UBERON:0000064!2.07e-07!219;UBERON:0000481!4.96e-07!347;UBERON:0002420!5.69e-07!9;UBERON:0007245!5.69e-07!9;UBERON:0010009!5.69e-07!9;UBERON:0010011!5.69e-07!9;UBERON:0000454!5.69e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.41e-58;22!UBERON:0001950;1.59e-55;20!UBERON:0000956;5.84e-51;25!UBERON:0000203;5.84e-51;25!UBERON:0001869;4.67e-48;32!UBERON:0001893;1.57e-42;34!UBERON:0002791;4.75e-42;32!UBERON:0003528;1.06e-37;34!UBERON:0002020;1.06e-37;34!UBERON:0002780;2.26e-33;41!UBERON:0001890;2.26e-33;41!UBERON:0001872;4.90e-31;5!UBERON:0000073;8.62e-23;53!UBERON:0002616;8.62e-23;53!UBERON:0001871;2.03e-22;6!UBERON:0001017;1.75e-21;75!UBERON:0001016;1.20e-19;83!UBERON:0000955;3.76e-17;68!UBERON:0002021;5.21e-12;5!UBERON:0000349;7.57e-12;5!UBERON:0000200;8.39e-10;6!UBERON:0002581;1.74e-07;1!UBERON:0001882;1.74e-07;1!UBERON:0002022;1.74e-07;1!UBERON:0007190;1.74e-07;1!UBERON:0005403;1.74e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,5.96e-58,22;UBERON:0001950,2.12e-55,20;UBERON:0001017,3.58e-54,81;UBERON:0001869,5.79e-51,32;UBERON:0000956,6.35e-51,25;UBERON:0000203,6.35e-51,25;UBERON:0001016,2.20e-48,89;UBERON:0001893,7.42e-48,34;UBERON:0002791,3.78e-45,32;UBERON:0002780,2.35e-44,41;UBERON:0001890,2.35e-44,41;UBERON:0003080,2.35e-44,41;UBERON:0006240,2.35e-44,41;UBERON:0003528,2.20e-42,34;UBERON:0002020,2.20e-42,34;UBERON:0000073,4.78e-42,53;UBERON:0002616,4.78e-42,53;UBERON:0001049,1.27e-39,56;UBERON:0005068,1.27e-39,56;UBERON:0006241,1.27e-39,56;UBERON:0007135,1.27e-39,56;UBERON:0000955,8.11e-39,68;UBERON:0006238,8.11e-39,68;UBERON:0003056,2.38e-32,61;UBERON:0001872,4.64e-31,5;UBERON:0003075,8.12e-29,82;UBERON:0007284,8.12e-29,82;UBERON:0002346,2.69e-27,86;UBERON:0004121,3.05e-27,171;UBERON:0000924,3.05e-27,171;UBERON:0006601,3.05e-27,171;UBERON:0001871,2.92e-22,6;UBERON:0010371,6.87e-22,104;UBERON:0011216,2.17e-21,223;UBERON:0010314,2.19e-16,132;UBERON:0007023,7.50e-14,114;UBERON:0000349,4.66e-12,5;UBERON:0002021,6.30e-12,5;UBERON:0000200,1.27e-09,6;UBERON:0000025,7.61e-09,192;UBERON:0001882,1.07e-07,1;UBERON:0005403,1.07e-07,1;UBERON:0002022,1.22e-07,1;UBERON:0002581,2.47e-07,1;UBERON:0007190,3.17e-07,1;UBERON:0004111,3.63e-07,240 | |||
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| ||
|short_description=p15@NEDD4L | |||
}} | }} |
Latest revision as of 23:06, 19 September 2015
Short description: | p15@NEDD4L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_NEDD4L_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -20bp_to_uc002lha.1_5end |
EntrezGene: | NEDD4L |
HGNC: | 7728 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 5.66e-20 | 8 |
neuron | 2.39e-10 | 6 |
neuroblast | 2.39e-10 | 6 |
electrically signaling cell | 2.39e-10 | 6 |
neural cell | 4.69e-08 | 25 |