FFCP PHASE1:Hg19::chr2:216230257..216230303,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |HGNC=3778 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_ENST00000469569_5end | |association_with_transcript=-17bp_to_ENST00000469569_5end | ||
|cluster_id=chr2:216230257..216230303,- | |||
|coexpression_cluster_id=C79 | |coexpression_cluster_id=C79 | ||
|description=CAGE_peak_49_at_FN1_5end | |description=CAGE_peak_49_at_FN1_5end | ||
|id=chr2:216230257..216230303,- | |id=chr2:216230257..216230303,- | ||
|ontology_enrichment_celltype=CL:0000055!6.52e-35!180;CL:0000057!9.79e-26!75;CL:0000680!2.46e-18!57;CL:0000056!2.46e-18!57;CL:0000355!2.46e-18!57;CL:0002371!1.18e-17!591;CL:0000183!1.51e-17!59;CL:0000187!8.45e-17!54;CL:0000144!9.23e-15!625;CL:0000393!3.90e-13!60;CL:0000211!3.90e-13!60;CL:0000048!3.97e-13!430;CL:0000192!4.68e-13!42;CL:0000514!4.68e-13!42;CL:0000723!2.03e-12!436;CL:0000034!8.08e-12!444;CL:0000359!1.78e-10!32;CL:0000548!2.24e-10!679;CL:0000004!2.24e-10!679;CL:0000255!2.24e-10!679;CL:0000012!6.61e-10!682;CL:0000222!1.13e-09!119;CL:0002620!1.19e-09!23;CL:0000220!1.86e-09!246;CL:0002494!2.45e-09!16;CL:0002321!2.66e-09!248;CL:0002334!9.72e-08!12 | |ontology_enrichment_celltype=CL:0000055!6.52e-35!180;CL:0000057!9.79e-26!75;CL:0000680!2.46e-18!57;CL:0000056!2.46e-18!57;CL:0000355!2.46e-18!57;CL:0002371!1.18e-17!591;CL:0000183!1.51e-17!59;CL:0000187!8.45e-17!54;CL:0000144!9.23e-15!625;CL:0000393!3.90e-13!60;CL:0000211!3.90e-13!60;CL:0000048!3.97e-13!430;CL:0000192!4.68e-13!42;CL:0000514!4.68e-13!42;CL:0000723!2.03e-12!436;CL:0000034!8.08e-12!444;CL:0000359!1.78e-10!32;CL:0000548!2.24e-10!679;CL:0000004!2.24e-10!679;CL:0000255!2.24e-10!679;CL:0000012!6.61e-10!682;CL:0000222!1.13e-09!119;CL:0002620!1.19e-09!23;CL:0000220!1.86e-09!246;CL:0002494!2.45e-09!16;CL:0002321!2.66e-09!248;CL:0002334!9.72e-08!12 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.42e-13;55!CL:0000723;3.37e-13;61!CL:0002494;3.00e-12;16!CL:0000048;3.88e-11;58!CL:0000057;3.18e-10;73!CL:0000034;2.12e-09;69!CL:0002620;5.11e-09;23!CL:0002320;1.87e-08;188!CL:0000359;4.18e-08;32!CL:0002334;4.76e-08;12!CL:0000187;2.74e-07;55!CL:0002570;3.78e-07;8!CL:0000349;4.29e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.93e-24,76;CL:0000048,3.43e-22,427;CL:0000723,3.41e-21,433;CL:0000034,6.52e-20,441;CL:0000680,8.16e-15,58;CL:0000056,8.16e-15,58;CL:0000355,8.16e-15,58;CL:0000187,5.16e-13,55;CL:0002494,2.38e-12,16;CL:0002320,2.21e-11,361;CL:0000393,1.26e-10,61;CL:0000211,1.26e-10,61;CL:0000134,1.38e-10,354;CL:0000192,2.73e-09,43;CL:0000514,2.73e-09,43;CL:0002620,5.61e-09,23;CL:0000359,1.93e-08,32;CL:0000219,3.47e-08,386;CL:0002334,4.24e-08,12;CL:0002570,2.38e-07,8;CL:0000349,4.01e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000355;5.21e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;4.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.27e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.63e-20!83;UBERON:0002329!1.63e-20!83;UBERON:0003077!1.63e-20!83;UBERON:0003059!1.63e-20!83;UBERON:0007282!1.63e-20!83;UBERON:0009618!1.63e-20!83;UBERON:0007285!1.63e-20!83;UBERON:0004290!3.20e-20!70;UBERON:0000486!2.25e-18!82;UBERON:0005256!9.00e-18!143;UBERON:0001134!4.77e-17!61;UBERON:0002036!4.77e-17!61;UBERON:0003082!4.77e-17!61;UBERON:0002385!2.23e-16!63;UBERON:0001015!2.23e-16!63;UBERON:0000383!2.23e-16!63;UBERON:0004872!6.38e-14!84;UBERON:0000490!2.81e-13!138;UBERON:0003914!3.23e-13!118;UBERON:0002100!7.42e-13!216;UBERON:0002049!1.88e-12!79;UBERON:0007798!1.88e-12!79;UBERON:0001637!5.39e-12!42;UBERON:0003509!5.39e-12!42;UBERON:0004572!5.39e-12!42;UBERON:0004535!3.01e-11!110;UBERON:0001009!1.09e-10!113;UBERON:0000055!5.55e-10!69;UBERON:0001981!1.59e-09!60;UBERON:0007500!1.59e-09!60;UBERON:0004537!1.59e-09!60;UBERON:0006965!1.59e-09!60;UBERON:0004573!5.08e-09!33;UBERON:0004571!5.08e-09!33;UBERON:0002199!1.71e-08!45;UBERON:0002416!1.71e-08!45;UBERON:0003104!7.86e-08!238;UBERON:0009142!7.86e-08!238;UBERON:0000948!8.66e-08!24;UBERON:0005498!8.66e-08!24;UBERON:0004140!8.66e-08!24;UBERON:0009881!8.66e-08!24;UBERON:0004141!8.66e-08!24;UBERON:0003084!8.66e-08!24;UBERON:0007005!8.66e-08!24;UBERON:0004139!8.66e-08!24;UBERON:0004291!8.66e-08!24;UBERON:0002097!1.14e-07!40;UBERON:0003102!1.24e-07!95;UBERON:0004923!3.21e-07!57;UBERON:0000468!6.92e-07!659 | |ontology_enrichment_uberon=UBERON:0000914!1.63e-20!83;UBERON:0002329!1.63e-20!83;UBERON:0003077!1.63e-20!83;UBERON:0003059!1.63e-20!83;UBERON:0007282!1.63e-20!83;UBERON:0009618!1.63e-20!83;UBERON:0007285!1.63e-20!83;UBERON:0004290!3.20e-20!70;UBERON:0000486!2.25e-18!82;UBERON:0005256!9.00e-18!143;UBERON:0001134!4.77e-17!61;UBERON:0002036!4.77e-17!61;UBERON:0003082!4.77e-17!61;UBERON:0002385!2.23e-16!63;UBERON:0001015!2.23e-16!63;UBERON:0000383!2.23e-16!63;UBERON:0004872!6.38e-14!84;UBERON:0000490!2.81e-13!138;UBERON:0003914!3.23e-13!118;UBERON:0002100!7.42e-13!216;UBERON:0002049!1.88e-12!79;UBERON:0007798!1.88e-12!79;UBERON:0001637!5.39e-12!42;UBERON:0003509!5.39e-12!42;UBERON:0004572!5.39e-12!42;UBERON:0004535!3.01e-11!110;UBERON:0001009!1.09e-10!113;UBERON:0000055!5.55e-10!69;UBERON:0001981!1.59e-09!60;UBERON:0007500!1.59e-09!60;UBERON:0004537!1.59e-09!60;UBERON:0006965!1.59e-09!60;UBERON:0004573!5.08e-09!33;UBERON:0004571!5.08e-09!33;UBERON:0002199!1.71e-08!45;UBERON:0002416!1.71e-08!45;UBERON:0003104!7.86e-08!238;UBERON:0009142!7.86e-08!238;UBERON:0000948!8.66e-08!24;UBERON:0005498!8.66e-08!24;UBERON:0004140!8.66e-08!24;UBERON:0009881!8.66e-08!24;UBERON:0004141!8.66e-08!24;UBERON:0003084!8.66e-08!24;UBERON:0007005!8.66e-08!24;UBERON:0004139!8.66e-08!24;UBERON:0004291!8.66e-08!24;UBERON:0002097!1.14e-07!40;UBERON:0003102!1.24e-07!95;UBERON:0004923!3.21e-07!57;UBERON:0000468!6.92e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.15e-07;198!UBERON:0000948;1.46e-07;22!UBERON:0001013;6.05e-07;14 | |||
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| ||
|short_description=p49@FN1 | |short_description=p49@FN1 | ||
}} | }} |
Latest revision as of 01:51, 20 September 2015
Short description: | p49@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | -17bp_to_ENST00000469569_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.93e-24 | 76 |
multi fate stem cell | 3.43e-22 | 427 |
somatic stem cell | 3.41e-21 | 433 |
stem cell | 6.52e-20 | 441 |
muscle precursor cell | 8.16e-15 | 58 |
myoblast | 8.16e-15 | 58 |
multi-potent skeletal muscle stem cell | 8.16e-15 | 58 |
muscle cell | 5.16e-13 | 55 |
cardiocyte | 2.38e-12 | 16 |
connective tissue cell | 2.21e-11 | 361 |
electrically responsive cell | 1.26e-10 | 61 |
electrically active cell | 1.26e-10 | 61 |
mesenchymal cell | 1.38e-10 | 354 |
smooth muscle cell | 2.73e-09 | 43 |
smooth muscle myoblast | 2.73e-09 | 43 |
skin fibroblast | 5.61e-09 | 23 |
vascular associated smooth muscle cell | 1.93e-08 | 32 |
motile cell | 3.47e-08 | 386 |
preadipocyte | 4.24e-08 | 12 |
mesenchymal stem cell of adipose | 2.38e-07 | 8 |
extraembryonic cell | 4.01e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.27e-07 | 14 |