FFCP PHASE1:Hg19::chr19:57901326..57901385,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:57901326..57901385,+
|short_description=p2@ZNF548
|description=CAGE_peak_2_at_ZNF548_5end
|association_with_transcript=108bp_to_ENST00000336128,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147694 | |EntrezGene=147694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26561 | |HGNC=26561 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NEK5 | |UniProt=Q8NEK5 | ||
|association_with_transcript=108bp_to_ENST00000336128,ENST00000366197,NM_001172773,NM_152909,uc002qom.2,uc002qon.2_5end | |||
|cluster_id=chr19:57901326..57901385,+ | |||
|description=CAGE_peak_2_at_ZNF548_5end | |||
|id=chr19:57901326..57901385,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.12e-20!172;CL:0000566!2.12e-20!172;CL:0000988!1.13e-18!182;CL:0002032!1.70e-17!165;CL:0000837!1.70e-17!165;CL:0000738!9.62e-15!140;CL:0002031!3.20e-12!124;CL:0000763!3.63e-12!112;CL:0000049!3.63e-12!112;CL:0002087!2.08e-10!119;CL:0002057!4.70e-09!42;CL:0000860!4.48e-08!45;CL:0000557!7.56e-08!71;CL:0000219!1.07e-07!390;CL:0000766!1.53e-07!76;CL:0000839!9.02e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.49e-07;33!CL:0002057;1.49e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.95e-21,168;CL:0000988,9.88e-20,177;CL:0002032,6.71e-18,161;CL:0000837,6.71e-18,161;CL:0000738,2.05e-15,136;CL:0000763,4.27e-13,108;CL:0000049,4.27e-13,108;CL:0002031,1.09e-12,120;CL:0002087,9.17e-11,115;CL:0000860,6.10e-09,42;CL:0002057,6.10e-09,42;CL:0000557,7.28e-09,67;CL:0000766,1.53e-08,72;CL:0000219,3.60e-08,386;CL:0000839,1.20e-07,66;CL:0000473,3.03e-07,48;CL:0000234,3.03e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;9.17e-07;42 | |||
|ontology_enrichment_disease=DOID:1240!2.47e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:1240,5.24e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.30e-13!82;UBERON:0005743!2.21e-11!86;UBERON:0000073!9.41e-11!94;UBERON:0001016!9.41e-11!94;UBERON:0000955!1.26e-09!69;UBERON:0006238!1.26e-09!69;UBERON:0002020!6.42e-09!34;UBERON:0003528!6.42e-09!34;UBERON:0001474!9.12e-09!86;UBERON:0001893!1.01e-08!34;UBERON:0001869!1.24e-08!32;UBERON:0001049!1.63e-08!57;UBERON:0005068!1.63e-08!57;UBERON:0006241!1.63e-08!57;UBERON:0007135!1.63e-08!57;UBERON:0002791!1.77e-08!33;UBERON:0002780!6.88e-08!41;UBERON:0001890!6.88e-08!41;UBERON:0006240!6.88e-08!41;UBERON:0003080!8.45e-08!42;UBERON:0002616!1.68e-07!59;UBERON:0000956!2.02e-07!25;UBERON:0000203!2.02e-07!25;UBERON:0001950!2.42e-07!20;UBERON:0002619!3.26e-07!22;UBERON:0002371!4.34e-07!80;UBERON:0004765!6.30e-07!101;UBERON:0001434!6.30e-07!101;UBERON:0002390!9.76e-07!102;UBERON:0003061!9.76e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-08;32!UBERON:0002791;1.35e-08;32!UBERON:0003528;1.64e-08;34!UBERON:0002020;1.64e-08;34!UBERON:0001893;1.99e-08;34!UBERON:0000956;4.35e-08;25!UBERON:0000203;4.35e-08;25!UBERON:0001950;7.81e-08;20!UBERON:0002619;1.18e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.26e-13,81;UBERON:0001016,7.01e-13,89;UBERON:0001474,4.00e-10,82;UBERON:0000955,7.46e-10,68;UBERON:0006238,7.46e-10,68;UBERON:0003528,2.40e-09,34;UBERON:0002020,2.40e-09,34;UBERON:0001893,3.86e-09,34;UBERON:0001869,4.83e-09,32;UBERON:0002791,7.40e-09,32;UBERON:0001049,1.11e-08,56;UBERON:0005068,1.11e-08,56;UBERON:0006241,1.11e-08,56;UBERON:0007135,1.11e-08,56;UBERON:0002371,3.03e-08,76;UBERON:0000073,3.83e-08,53;UBERON:0002616,3.83e-08,53;UBERON:0004765,4.16e-08,90;UBERON:0002780,4.92e-08,41;UBERON:0001890,4.92e-08,41;UBERON:0003080,4.92e-08,41;UBERON:0006240,4.92e-08,41;UBERON:0002390,6.05e-08,98;UBERON:0003061,6.05e-08,98;UBERON:0000956,9.21e-08,25;UBERON:0000203,9.21e-08,25;UBERON:0001950,1.11e-07,20;UBERON:0002619,1.53e-07,22;UBERON:0002405,2.60e-07,93;UBERON:0001434,7.28e-07,100 | |||
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| ||
|short_description=p2@ZNF548 | |||
}} | }} |
Latest revision as of 05:40, 20 September 2015
Short description: | p2@ZNF548 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZNF548_5end |
Coexpression cluster: | NA |
Association with transcript: | 108bp_to_ENST00000336128, ENST00000366197, NM_001172773, NM_152909, uc002qom.2, uc002qon.2_5end |
EntrezGene: | ZNF548 |
HGNC: | 26561 |
UniProt: | Q8NEK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.95e-21 | 168 |
hematopoietic cell | 9.88e-20 | 177 |
hematopoietic oligopotent progenitor cell | 6.71e-18 | 161 |
hematopoietic multipotent progenitor cell | 6.71e-18 | 161 |
leukocyte | 2.05e-15 | 136 |
myeloid cell | 4.27e-13 | 108 |
common myeloid progenitor | 4.27e-13 | 108 |
hematopoietic lineage restricted progenitor cell | 1.09e-12 | 120 |
nongranular leukocyte | 9.17e-11 | 115 |
classical monocyte | 6.10e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.10e-09 | 42 |
granulocyte monocyte progenitor cell | 7.28e-09 | 67 |
myeloid leukocyte | 1.53e-08 | 72 |
motile cell | 3.60e-08 | 386 |
myeloid lineage restricted progenitor cell | 1.20e-07 | 66 |
defensive cell | 3.03e-07 | 48 |
phagocyte | 3.03e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.26e-13 | 81 |
nervous system | 7.01e-13 | 89 |
bone element | 4.00e-10 | 82 |
brain | 7.46e-10 | 68 |
future brain | 7.46e-10 | 68 |
brain grey matter | 2.40e-09 | 34 |
gray matter | 2.40e-09 | 34 |
telencephalon | 3.86e-09 | 34 |
cerebral hemisphere | 4.83e-09 | 32 |
regional part of telencephalon | 7.40e-09 | 32 |
neural tube | 1.11e-08 | 56 |
neural rod | 1.11e-08 | 56 |
future spinal cord | 1.11e-08 | 56 |
neural keel | 1.11e-08 | 56 |
bone marrow | 3.03e-08 | 76 |
regional part of nervous system | 3.83e-08 | 53 |
regional part of brain | 3.83e-08 | 53 |
skeletal element | 4.16e-08 | 90 |
regional part of forebrain | 4.92e-08 | 41 |
forebrain | 4.92e-08 | 41 |
anterior neural tube | 4.92e-08 | 41 |
future forebrain | 4.92e-08 | 41 |
hematopoietic system | 6.05e-08 | 98 |
blood island | 6.05e-08 | 98 |
cerebral cortex | 9.21e-08 | 25 |
pallium | 9.21e-08 | 25 |
neocortex | 1.11e-07 | 20 |
regional part of cerebral cortex | 1.53e-07 | 22 |
immune system | 2.60e-07 | 93 |
skeletal system | 7.28e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 5.24e-07 | 39 |