FFCP PHASE1:Hg19::chr12:70093076..70093090,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144453 | |EntrezGene=144453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17105 | |HGNC=17105 | ||
|TSSclassifier=strong | |||
|UniProt=A8MVM3 | |UniProt=A8MVM3 | ||
|association_with_transcript=0bp_to_ENST00000393372_5end | |||
|cluster_id=chr12:70093076..70093090,- | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_1_at_BEST3_5end | |||
|id=chr12:70093076..70093090,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.20e-09;2!CL:0000242;2.20e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,2.20e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.48e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-51!115;UBERON:0001049!6.67e-51!57;UBERON:0005068!6.67e-51!57;UBERON:0006241!6.67e-51!57;UBERON:0007135!6.67e-51!57;UBERON:0002616!4.15e-41!59;UBERON:0001017!2.42e-36!82;UBERON:0002780!4.27e-36!41;UBERON:0001890!4.27e-36!41;UBERON:0006240!4.27e-36!41;UBERON:0003075!6.37e-36!86;UBERON:0007284!6.37e-36!86;UBERON:0005743!1.06e-35!86;UBERON:0003080!4.99e-35!42;UBERON:0000955!9.08e-35!69;UBERON:0006238!9.08e-35!69;UBERON:0002346!1.02e-33!90;UBERON:0001893!2.87e-31!34;UBERON:0002020!3.53e-31!34;UBERON:0003528!3.53e-31!34;UBERON:0000073!4.49e-31!94;UBERON:0001016!4.49e-31!94;UBERON:0002791!7.05e-30!33;UBERON:0000153!1.15e-28!129;UBERON:0007811!1.15e-28!129;UBERON:0001869!3.15e-28!32;UBERON:0000033!6.24e-25!123;UBERON:0003056!1.75e-24!61;UBERON:0002619!1.91e-24!22;UBERON:0001950!2.78e-24!20;UBERON:0004121!2.61e-23!169;UBERON:0000924!2.10e-22!173;UBERON:0006601!2.10e-22!173;UBERON:0000956!5.43e-21!25;UBERON:0000203!5.43e-21!25;UBERON:0003076!1.13e-16!15;UBERON:0003057!1.13e-16!15;UBERON:0000475!1.05e-12!365;UBERON:0000483!3.13e-12!309;UBERON:0002420!3.20e-12!9;UBERON:0007245!3.20e-12!9;UBERON:0010009!3.20e-12!9;UBERON:0010011!3.20e-12!9;UBERON:0000454!3.20e-12!9;UBERON:0000119!6.01e-12!312;UBERON:0004733!6.58e-12!12;UBERON:0002028!6.58e-12!12;UBERON:0007277!6.58e-12!12;UBERON:0002308!7.67e-12!9;UBERON:0000125!7.67e-12!9;UBERON:0000025!9.51e-12!194;UBERON:0002298!5.31e-11!8;UBERON:0004732!7.71e-11!13;UBERON:0001871!8.43e-11!7;UBERON:0000200!1.01e-10!6;UBERON:0004111!4.23e-10!241;UBERON:0000481!1.71e-09!347;UBERON:0000477!1.73e-09!286;UBERON:0000064!3.22e-09!219;UBERON:0009663!6.03e-09!7;UBERON:0002680!2.32e-07!9;UBERON:0001895!2.32e-07!9;UBERON:0010092!2.32e-07!9;UBERON:0001896!9.59e-07!3;UBERON:0002240!9.59e-07!3;UBERON:0005290!9.59e-07!3;UBERON:0010096!9.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.84e-11;3!UBERON:0005290;1.84e-11;3!UBERON:0004733;1.70e-10;12!UBERON:0002028;1.70e-10;12!UBERON:0004732;1.21e-09;13!UBERON:0005090;1.83e-09;2!UBERON:0001630;1.83e-09;2!UBERON:0000341;2.75e-09;2!UBERON:0003127;1.25e-08;2!UBERON:0000073;1.74e-08;53!UBERON:0002616;1.74e-08;53!UBERON:0001829;3.37e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.17e-19,114;UBERON:0003076,1.35e-14,15;UBERON:0003057,1.35e-14,15;UBERON:0001049,1.61e-14,56;UBERON:0005068,1.61e-14,56;UBERON:0006241,1.61e-14,56;UBERON:0007135,1.61e-14,56;UBERON:0000073,8.68e-12,53;UBERON:0002616,8.68e-12,53;UBERON:0001896,1.91e-11,3;UBERON:0005290,1.91e-11,3;UBERON:0010096,1.91e-11,3;UBERON:0004733,1.40e-10,12;UBERON:0002028,1.40e-10,12;UBERON:0007277,1.40e-10,12;UBERON:0004732,1.02e-09,13;UBERON:0005090,1.80e-09,2;UBERON:0001630,1.80e-09,2;UBERON:0010371,2.26e-09,104;UBERON:0000341,2.81e-09,2;UBERON:0001017,8.72e-09,81;UBERON:0003075,8.72e-09,82;UBERON:0007284,8.72e-09,82;UBERON:0003127,1.25e-08,2;UBERON:0000955,2.32e-08,68;UBERON:0006238,2.32e-08,68;UBERON:0002346,3.24e-08,86;UBERON:0001829,3.77e-08,2;UBERON:0001016,1.42e-07,89;UBERON:0004121,1.87e-07,171;UBERON:0000924,1.87e-07,171;UBERON:0006601,1.87e-07,171 | |||
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| ||
|short_description=p1@BEST3 | |||
}} | }} |
Latest revision as of 06:41, 20 September 2015
Short description: | p1@BEST3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BEST3_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_ENST00000393372_5end |
EntrezGene: | BEST3 |
HGNC: | 17105 |
UniProt: | A8MVM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 2.20e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 7.17e-19 | 114 |
posterior neural tube | 1.35e-14 | 15 |
chordal neural plate | 1.35e-14 | 15 |
neural tube | 1.61e-14 | 56 |
neural rod | 1.61e-14 | 56 |
future spinal cord | 1.61e-14 | 56 |
neural keel | 1.61e-14 | 56 |
regional part of nervous system | 8.68e-12 | 53 |
regional part of brain | 8.68e-12 | 53 |
medulla oblongata | 1.91e-11 | 3 |
myelencephalon | 1.91e-11 | 3 |
future myelencephalon | 1.91e-11 | 3 |
segmental subdivision of hindbrain | 1.40e-10 | 12 |
hindbrain | 1.40e-10 | 12 |
presumptive hindbrain | 1.40e-10 | 12 |
segmental subdivision of nervous system | 1.02e-09 | 13 |
muscle structure | 1.80e-09 | 2 |
muscle organ | 1.80e-09 | 2 |
ecto-epithelium | 2.26e-09 | 104 |
throat | 2.81e-09 | 2 |
central nervous system | 8.72e-09 | 81 |
neural plate | 8.72e-09 | 82 |
presumptive neural plate | 8.72e-09 | 82 |
open tracheal system trachea | 1.25e-08 | 2 |
brain | 2.32e-08 | 68 |
future brain | 2.32e-08 | 68 |
neurectoderm | 3.24e-08 | 86 |
major salivary gland | 3.77e-08 | 2 |
nervous system | 1.42e-07 | 89 |
ectoderm-derived structure | 1.87e-07 | 171 |
ectoderm | 1.87e-07 | 171 |
presumptive ectoderm | 1.87e-07 | 171 |