FFCP PHASE1:Hg19::chr2:217540397..217540408,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3488 | |EntrezGene=3488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5474 | |HGNC=5474 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=314bp_to_L27560_5end | |association_with_transcript=314bp_to_L27560_5end | ||
|cluster_id=chr2:217540397..217540408,- | |||
|coexpression_cluster_id=C252 | |coexpression_cluster_id=C252 | ||
|description=CAGE_peak_47_at_IGFBP5_5end | |description=CAGE_peak_47_at_IGFBP5_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.10e-13;2!CL:0002571;2.10e-13;2!CL:0000153;1.99e-11;9!CL:0000447;1.99e-11;9!CL:0000327;1.77e-10;15!CL:0000499;3.09e-10;28!CL:0000214;1.59e-09;3!CL:0002622;3.11e-09;3!CL:0002616;4.27e-08;1!CL:0000511;1.53e-07;1!CL:0002625;1.53e-07;1!CL:0002174;1.53e-07;1!CL:0002581;1.53e-07;1!CL:0000216;1.53e-07;1!CL:0000501;1.53e-07;1!CL:0000151;5.47e-07;36 | |ontology_enrichment_celltype_v019=CL:0002195;2.10e-13;2!CL:0002571;2.10e-13;2!CL:0000153;1.99e-11;9!CL:0000447;1.99e-11;9!CL:0000327;1.77e-10;15!CL:0000499;3.09e-10;28!CL:0000214;1.59e-09;3!CL:0002622;3.11e-09;3!CL:0002616;4.27e-08;1!CL:0000511;1.53e-07;1!CL:0002625;1.53e-07;1!CL:0002174;1.53e-07;1!CL:0002581;1.53e-07;1!CL:0000216;1.53e-07;1!CL:0000501;1.53e-07;1!CL:0000151;5.47e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0002195,6.48e-13,2;CL:0002571,6.48e-13,2;CL:0000153,2.62e-11,9;CL:0000447,2.62e-11,9;CL:0000327,2.15e-10,15;CL:0000499,3.73e-10,28;CL:0000214,2.33e-09,3;CL:0002622,3.54e-09,3;CL:0002616,4.28e-08,1;CL:0000151,9.54e-08,36;CL:0000511,1.01e-07,1;CL:0002625,1.01e-07,1;CL:0000216,1.01e-07,1;CL:0002581,1.22e-07,1;CL:0002174,1.69e-07,1;CL:0000501,1.69e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0004874;1.53e-07;1!UBERON:0003099;1.53e-07;1!UBERON:0003852;1.53e-07;1 | |ontology_enrichment_development_v019=UBERON:0004874;1.53e-07;1!UBERON:0003099;1.53e-07;1!UBERON:0003852;1.53e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3571;4.71e-08;1 | |ontology_enrichment_disease_v019=DOID:3571;4.71e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,4.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001443!2.33e-08!11;UBERON:0000310!2.97e-07!10;UBERON:0000475!5.36e-07!365;UBERON:0005156!7.87e-07!59;UBERON:0000990!7.87e-07!59 | |ontology_enrichment_uberon=UBERON:0001443!2.33e-08!11;UBERON:0000310!2.97e-07!10;UBERON:0000475!5.36e-07!365;UBERON:0005156!7.87e-07!59;UBERON:0000990!7.87e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;6.04e-14;2!UBERON:0004457;1.37e-11;9!UBERON:0000042;1.37e-11;9!UBERON:0003101;9.68e-10;22!UBERON:0000079;9.68e-10;22!UBERON:0006915;1.59e-09;3!UBERON:0007616;1.59e-09;3!UBERON:0002217;1.59e-09;3!UBERON:0002018;1.59e-09;3!UBERON:0000989;1.53e-07;1!UBERON:0001136;1.53e-07;1!UBERON:0001301;1.53e-07;1!UBERON:0001343;1.53e-07;1!UBERON:0005705;1.53e-07;1!UBERON:0008811;1.53e-07;1!UBERON:0008193;1.53e-07;1!UBERON:0010912;1.53e-07;1!UBERON:0002514;1.53e-07;1!UBERON:0003457;1.53e-07;1!UBERON:0008907;1.53e-07;1!UBERON:0008001;1.53e-07;1!UBERON:0007213;1.53e-07;1!UBERON:0009891;1.53e-07;1!UBERON:0007914;1.53e-07;1!UBERON:0004910;1.53e-07;1!UBERON:0007375;1.53e-07;1!UBERON:0003323;1.53e-07;1!UBERON:0010258;1.53e-07;1!UBERON:0005253;1.53e-07;1!UBERON:0007842;1.53e-07;1!UBERON:0004813;1.53e-07;1!UBERON:0002397;1.53e-07;1!UBERON:0003113;1.53e-07;1!UBERON:0003277;1.53e-07;1!UBERON:0001709;1.53e-07;1!UBERON:0002244;1.53e-07;1!UBERON:0005620;1.53e-07;1!UBERON:0010364;1.53e-07;1!UBERON:0004288;1.53e-07;1!UBERON:0005904;3.94e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0005406;6.04e-14;2!UBERON:0004457;1.37e-11;9!UBERON:0000042;1.37e-11;9!UBERON:0003101;9.68e-10;22!UBERON:0000079;9.68e-10;22!UBERON:0006915;1.59e-09;3!UBERON:0007616;1.59e-09;3!UBERON:0002217;1.59e-09;3!UBERON:0002018;1.59e-09;3!UBERON:0000989;1.53e-07;1!UBERON:0001136;1.53e-07;1!UBERON:0001301;1.53e-07;1!UBERON:0001343;1.53e-07;1!UBERON:0005705;1.53e-07;1!UBERON:0008811;1.53e-07;1!UBERON:0008193;1.53e-07;1!UBERON:0010912;1.53e-07;1!UBERON:0002514;1.53e-07;1!UBERON:0003457;1.53e-07;1!UBERON:0008907;1.53e-07;1!UBERON:0008001;1.53e-07;1!UBERON:0007213;1.53e-07;1!UBERON:0009891;1.53e-07;1!UBERON:0007914;1.53e-07;1!UBERON:0004910;1.53e-07;1!UBERON:0007375;1.53e-07;1!UBERON:0003323;1.53e-07;1!UBERON:0010258;1.53e-07;1!UBERON:0005253;1.53e-07;1!UBERON:0007842;1.53e-07;1!UBERON:0004813;1.53e-07;1!UBERON:0002397;1.53e-07;1!UBERON:0003113;1.53e-07;1!UBERON:0003277;1.53e-07;1!UBERON:0001709;1.53e-07;1!UBERON:0002244;1.53e-07;1!UBERON:0005620;1.53e-07;1!UBERON:0010364;1.53e-07;1!UBERON:0004288;1.53e-07;1!UBERON:0005904;3.94e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,4.85e-14,2;UBERON:0003101,7.69e-10,22;UBERON:0000079,7.69e-10,22;UBERON:0006915,2.33e-09,3;UBERON:0007616,2.33e-09,3;UBERON:0002217,2.33e-09,3;UBERON:0002018,2.33e-09,3;UBERON:0004457,1.03e-08,12;UBERON:0000042,1.03e-08,12;UBERON:0000989,7.26e-08,1;UBERON:0008811,7.26e-08,1;UBERON:0006258,7.26e-08,1;UBERON:0005876,7.26e-08,1;UBERON:0004874,7.26e-08,1;UBERON:0001136,1.01e-07,1;UBERON:0001343,1.01e-07,1;UBERON:0004910,1.01e-07,1;UBERON:0005154,1.01e-07,1;UBERON:0005295,1.01e-07,1;UBERON:0004813,1.01e-07,1;UBERON:0005297,1.01e-07,1;UBERON:0005294,1.01e-07,1;UBERON:0010141,1.01e-07,1;UBERON:0005891,1.01e-07,1;UBERON:0003064,1.30e-07,28;UBERON:0005705,1.48e-07,1;UBERON:0008193,1.48e-07,1;UBERON:0010912,1.48e-07,1;UBERON:0002514,1.48e-07,1;UBERON:0003457,1.48e-07,1;UBERON:0008907,1.48e-07,1;UBERON:0008001,1.48e-07,1;UBERON:0007213,1.48e-07,1;UBERON:0009891,1.48e-07,1;UBERON:0007914,1.48e-07,1;UBERON:0009292,1.48e-07,1;UBERON:0003099,1.48e-07,1;UBERON:0007375,1.48e-07,1;UBERON:0003323,1.48e-07,1;UBERON:0010258,1.48e-07,1;UBERON:0007842,1.48e-07,1;UBERON:0009494,1.48e-07,1;UBERON:0010042,1.48e-07,1;UBERON:0010045,1.48e-07,1;UBERON:0010259,1.48e-07,1;UBERON:0010359,1.48e-07,1;UBERON:0009526,1.48e-07,1;UBERON:0002397,1.48e-07,1;UBERON:0003113,1.48e-07,1;UBERON:0003277,1.48e-07,1;UBERON:0001709,1.48e-07,1;UBERON:0004066,1.48e-07,1;UBERON:0002244,1.48e-07,1;UBERON:0005620,1.48e-07,1;UBERON:0004362,1.48e-07,1;UBERON:0010364,1.48e-07,1;UBERON:0010046,1.48e-07,1;UBERON:0005868,1.48e-07,1;UBERON:0007238,1.48e-07,1;UBERON:0004288,1.48e-07,1;UBERON:0004068,1.48e-07,1;UBERON:0010334,1.48e-07,1;UBERON:0003852,1.48e-07,1;UBERON:0010253,1.48e-07,1;UBERON:0001301,1.58e-07,1;UBERON:0005256,2.77e-07,122;UBERON:0005904,3.28e-07,4;UBERON:0004122,6.67e-07,15 | |||
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|short_description=p47@IGFBP5 | |short_description=p47@IGFBP5 | ||
}} | }} |
Latest revision as of 07:02, 20 September 2015
Short description: | p47@IGFBP5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_47_at_IGFBP5_5end |
Coexpression cluster: | C252_hepatic_Olfactory_sacrococcigeal_leiomyoma_normal_Synoviocyte_glioblastoma |
Association with transcript: | 314bp_to_L27560_5end |
EntrezGene: | IGFBP5 |
HGNC: | 5474 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 6.48e-13 | 2 |
hepatic mesenchymal stem cell | 6.48e-13 | 2 |
GAG secreting cell | 2.62e-11 | 9 |
carbohydrate secreting cell | 2.62e-11 | 9 |
extracellular matrix secreting cell | 2.15e-10 | 15 |
stromal cell | 3.73e-10 | 28 |
synovial cell | 2.33e-09 | 3 |
prostate stromal cell | 3.54e-09 | 3 |
perirenal adipocyte cell | 4.28e-08 | 1 |
secretory cell | 9.54e-08 | 36 |
androgen binding protein secreting cell | 1.01e-07 | 1 |
seminiferous tubule epithelial cell | 1.01e-07 | 1 |
Sertoli cell | 1.01e-07 | 1 |
perirenal preadipocyte | 1.22e-07 | 1 |
follicular cell of ovary | 1.69e-07 | 1 |
granulosa cell | 1.69e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 4.57e-08 | 1 |