FFCP PHASE1:Hg19::chr19:6110458..6110472,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5990 | |EntrezGene=5990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9983 | |HGNC=9983 | ||
|TSSclassifier=strong | |||
|UniProt=P48378 | |UniProt=P48378 | ||
|association_with_transcript=191bp_to_ENST00000303657,ENST00000359161,NM_000635,NM_134433,uc002meb.2,uc002mec.2,uc010xiy.1_5end | |association_with_transcript=191bp_to_ENST00000303657,ENST00000359161,NM_000635,NM_134433,uc002meb.2,uc002mec.2,uc010xiy.1_5end | ||
|cluster_id=chr19:6110458..6110472,- | |||
|description=CAGE_peak_3_at_RFX2_5end | |description=CAGE_peak_3_at_RFX2_5end | ||
|id=chr19:6110458..6110472,- | |id=chr19:6110458..6110472,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;9.41e-07;2!CL:0001016;9.41e-07;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.84e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-19!115;UBERON:0001049!1.26e-13!57;UBERON:0005068!1.26e-13!57;UBERON:0006241!1.26e-13!57;UBERON:0007135!1.26e-13!57;UBERON:0005743!6.22e-12!86;UBERON:0000955!2.86e-11!69;UBERON:0006238!2.86e-11!69;UBERON:0001017!4.42e-11!82;UBERON:0002780!1.52e-10!41;UBERON:0001890!1.52e-10!41;UBERON:0006240!1.52e-10!41;UBERON:0003075!3.02e-10!86;UBERON:0007284!3.02e-10!86;UBERON:0000073!4.93e-10!94;UBERON:0001016!4.93e-10!94;UBERON:0003080!5.21e-10!42;UBERON:0002616!8.23e-10!59;UBERON:0002020!1.14e-09!34;UBERON:0003528!1.14e-09!34;UBERON:0001893!3.25e-09!34;UBERON:0002791!4.24e-09!33;UBERON:0002346!5.49e-09!90;UBERON:0001869!4.59e-08!32;UBERON:0002308!1.48e-07!9;UBERON:0000125!1.48e-07!9;UBERON:0002420!1.72e-07!9;UBERON:0007245!1.72e-07!9;UBERON:0010009!1.72e-07!9;UBERON:0010011!1.72e-07!9;UBERON:0000454!1.72e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!1.20e-19!115;UBERON:0001049!1.26e-13!57;UBERON:0005068!1.26e-13!57;UBERON:0006241!1.26e-13!57;UBERON:0007135!1.26e-13!57;UBERON:0005743!6.22e-12!86;UBERON:0000955!2.86e-11!69;UBERON:0006238!2.86e-11!69;UBERON:0001017!4.42e-11!82;UBERON:0002780!1.52e-10!41;UBERON:0001890!1.52e-10!41;UBERON:0006240!1.52e-10!41;UBERON:0003075!3.02e-10!86;UBERON:0007284!3.02e-10!86;UBERON:0000073!4.93e-10!94;UBERON:0001016!4.93e-10!94;UBERON:0003080!5.21e-10!42;UBERON:0002616!8.23e-10!59;UBERON:0002020!1.14e-09!34;UBERON:0003528!1.14e-09!34;UBERON:0001893!3.25e-09!34;UBERON:0002791!4.24e-09!33;UBERON:0002346!5.49e-09!90;UBERON:0001869!4.59e-08!32;UBERON:0002308!1.48e-07!9;UBERON:0000125!1.48e-07!9;UBERON:0002420!1.72e-07!9;UBERON:0007245!1.72e-07!9;UBERON:0010009!1.72e-07!9;UBERON:0010011!1.72e-07!9;UBERON:0000454!1.72e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.32e-12;6!UBERON:0000125;5.47e-11;9!UBERON:0002308;5.47e-11;9!UBERON:0002420;1.41e-10;9!UBERON:0007245;1.41e-10;9!UBERON:0010009;1.41e-10;9!UBERON:0010011;1.41e-10;9!UBERON:0000454;1.41e-10;9!UBERON:0001896;4.16e-10;3!UBERON:0005290;4.16e-10;3!UBERON:0000349;5.70e-09;5!UBERON:0000073;2.30e-07;53!UBERON:0002616;2.30e-07;53!UBERON:0001873;2.84e-07;2!UBERON:0000369;3.23e-07;4!UBERON:0002435;3.23e-07;4!UBERON:0000204;3.23e-07;4!UBERON:0000341;3.55e-07;2!UBERON:0003127;4.12e-07;2!UBERON:0002148;8.51e-07;2!UBERON:0006331;8.51e-07;2!UBERON:0009662;8.51e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.10e-17,114;UBERON:0002298,1.36e-12,6;UBERON:0001049,6.65e-12,56;UBERON:0005068,6.65e-12,56;UBERON:0006241,6.65e-12,56;UBERON:0007135,6.65e-12,56;UBERON:0000125,7.03e-11,9;UBERON:0002308,7.03e-11,9;UBERON:0002420,9.86e-11,9;UBERON:0007245,9.86e-11,9;UBERON:0010009,9.86e-11,9;UBERON:0010011,9.86e-11,9;UBERON:0000454,9.86e-11,9;UBERON:0001896,4.19e-10,3;UBERON:0005290,4.19e-10,3;UBERON:0010096,4.19e-10,3;UBERON:0000073,8.75e-10,53;UBERON:0002616,8.75e-10,53;UBERON:0001017,1.26e-09,81;UBERON:0000349,2.75e-09,5;UBERON:0003076,6.79e-09,15;UBERON:0003057,6.79e-09,15;UBERON:0000955,1.19e-08,68;UBERON:0006238,1.19e-08,68;UBERON:0001016,3.42e-08,89;UBERON:0003075,9.79e-08,82;UBERON:0007284,9.79e-08,82;UBERON:0001873,2.81e-07,2;UBERON:0010122,2.81e-07,2;UBERON:0000369,2.98e-07,4;UBERON:0002435,2.98e-07,4;UBERON:0000204,2.98e-07,4;UBERON:0010082,2.98e-07,4;UBERON:0002346,3.54e-07,86;UBERON:0000341,4.02e-07,2;UBERON:0003127,4.65e-07,2;UBERON:0002148,8.80e-07,2;UBERON:0006331,8.80e-07,2;UBERON:0009662,8.80e-07,2 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0.393364276848904,0.767658796194425,0.619264493264304,0,0,0,0,0,1.17440175733939,0,1.00272223735071,1.51907609501096,0,0,0,0.581592955118259,0,0.970336244751265,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.709446689665756,2.06847408441971,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.320929027076094,0,0.659702600373432,0,0.426224750532694,0,0,0.622822248995575,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0,0.425208599930087,0.209658645508376,0.112328631146495,0.300353785683013,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0.764546456250458,3.96513985737078,1.68152568894461,0.263384084775077,0.196709770113833,1.57204305099666,0.411202997999018,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0,0,0,0.444859689486181,0,0,0,0.766440987203842,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.604820229674197,0.534880391567015,1.30341963494519,0,0,0,0.361439152384566,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0,0,1.17881167947941,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,1.06748995729705,0,0,0,0,0,0,0.234321431833797,0.312160076830321,0.570471821544449,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.103052529238439,0.772921620136887,0.18611685633159,0.337552664482532,0.292311015483596,0,0.368199594569197,0.323292113637624,0.710019185033229,0,0.339121184620975,0.193260853163297,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0.626909658919938,0.290633938513962,0,0,0.088048434013226,5.1832028885193,3.89123874225796,8.2057581727147,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.399891964728228,0,0,0,0,2.29723871668228,0,0,0,0,0,0.788123040807709,1.2937654491571,0.77005821767849,0,0,0,0,0,0,0,2.48649308061621,0.36807447515742,0,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0.496215615637554,0.306923946576125,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0,0.116210378459959,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0.256450125116389,0.656029291399411,0.325378394664303,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.05553817648832,1.64647446479951,0,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,0,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0,0,0.320472213382419,0,0.735120647943095,0,0.144269212976445,0,0,0,0.383010740264733,0.846694330895531,0.324621940274555,0.280797178113459,0,0,0,0.169291777801603,0.1605880751037,0,0,0.343505344755765,0,0,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0.284136146806413,0.71623345421307,0.296964680832639,1.84296421259539,1.9882952955326,1.82870241333667,0,0.16480387422676,0.63337622438398,5.18044769452781,0.828851746593443,2.51932747854276,0,0.246169610922139,0,0.0898683511473268,0,0.511572370226872,0.295930216910801,0,0,0.969332746095218,0.927680981618513,0,0,0.0874599999961957,0,0.341380344856499,0.508507300585533,0,0.689486746482929,0.583209226766509,0,7.08593108651071,3.73848959738765,0,0.884634079449797,0.295547618953547,0.87754158861589,0,0.41827123283581,0.538651809526579,0.455768223388005,0,0,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,1.63232808159148,0,0,0,0.619202951523374,0,0,0.370691816839509,0.104421949505455,4.85288157460875,0.802577647298789,0.468528891450678,0.182454789215666,0.391329237864179,0.485560759068186,0,0,0.61214552326098,1.01098527405581,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0.0870592065804026,3.66926003308263,0,0,0,0,1.16386819786103,1.5003541537555,0.451961481561065,0,0.19871461170299,0.379864775735272,0.195551382734803,0,1.49417096317547,0.39961921916426,0.144090417154106,0.114536596165916,4.63306494227304,0,0.248505071130865,0,0.407712618220842,1.04602846312333,0.203996435272644,1.15580235960608,0.600420288709789,0.958337652243951,2.55493176133945,0,0,0.837847203816763,1.60412296808179,0.717873024576814,0.599037001496973,0.858452096273142,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,4.08610218334727,0,0,0.415440338029185,1.1248694577575,5.41661368190565,0.607495566580247,0.33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| ||
|short_description=p3@RFX2 | |short_description=p3@RFX2 | ||
}} | }} |
Latest revision as of 15:00, 24 September 2015
Short description: | p3@RFX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RFX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 191bp_to_ENST00000303657, ENST00000359161, NM_000635, NM_134433, uc002meb.2, uc002mec.2, uc010xiy.1_5end |
EntrezGene: | RFX2 |
HGNC: | 9983 |
UniProt: | P48378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data