FFCP PHASE1:Hg19::chr9:118916082..118916108,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5069 | |EntrezGene=5069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8602 | |HGNC=8602 | ||
|TSSclassifier=strong | |||
|UniProt=Q13219 | |UniProt=Q13219 | ||
|association_with_transcript=0bp_to_ENST00000328252_5end | |association_with_transcript=0bp_to_ENST00000328252_5end | ||
|cluster_id=chr9:118916082..118916108,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_1_at_PAPPA_5end | |description=CAGE_peak_1_at_PAPPA_5end | ||
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|ontology_enrichment_celltype=CL:0000055!2.06e-37!180;CL:0000187!1.25e-25!54;CL:0000680!2.91e-25!57;CL:0000056!2.91e-25!57;CL:0000355!2.91e-25!57;CL:0000183!1.91e-23!59;CL:0000393!2.17e-22!60;CL:0000211!2.17e-22!60;CL:0000192!3.47e-22!42;CL:0000514!3.47e-22!42;CL:0000057!1.68e-21!75;CL:0000359!8.77e-20!32;CL:0000222!3.83e-11!119;CL:0002494!1.79e-10!16;CL:0002539!6.57e-08!10;CL:0002620!2.14e-07!23;CL:0002334!7.39e-07!12 | |ontology_enrichment_celltype=CL:0000055!2.06e-37!180;CL:0000187!1.25e-25!54;CL:0000680!2.91e-25!57;CL:0000056!2.91e-25!57;CL:0000355!2.91e-25!57;CL:0000183!1.91e-23!59;CL:0000393!2.17e-22!60;CL:0000211!2.17e-22!60;CL:0000192!3.47e-22!42;CL:0000514!3.47e-22!42;CL:0000057!1.68e-21!75;CL:0000359!8.77e-20!32;CL:0000222!3.83e-11!119;CL:0002494!1.79e-10!16;CL:0002539!6.57e-08!10;CL:0002620!2.14e-07!23;CL:0002334!7.39e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.63e-22;32!CL:0000192;1.77e-18;43!CL:0000187;1.21e-16;55!CL:0000393;3.64e-13;61!CL:0000211;3.64e-13;61!CL:0002494;1.62e-12;16!CL:0002539;2.16e-09;10!CL:0000134;3.76e-09;55!CL:0000057;5.61e-09;73!CL:0000723;2.76e-08;61!CL:0002334;4.37e-08;12!CL:0000349;1.54e-07;19!CL:0000048;2.19e-07;58 | |ontology_enrichment_celltype_v019=CL:0000359;1.63e-22;32!CL:0000192;1.77e-18;43!CL:0000187;1.21e-16;55!CL:0000393;3.64e-13;61!CL:0000211;3.64e-13;61!CL:0002494;1.62e-12;16!CL:0002539;2.16e-09;10!CL:0000134;3.76e-09;55!CL:0000057;5.61e-09;73!CL:0000723;2.76e-08;61!CL:0002334;4.37e-08;12!CL:0000349;1.54e-07;19!CL:0000048;2.19e-07;58 | ||
|ontology_enrichment_celltype_v019_2=CL:0000187,5.22e-30,55;CL:0000680,2.82e-28,58;CL:0000056,2.82e-28,58;CL:0000355,2.82e-28,58;CL:0000192,1.84e-25,43;CL:0000514,1.84e-25,43;CL:0000393,6.18e-25,61;CL:0000211,6.18e-25,61;CL:0000359,5.63e-24,32;CL:0000057,1.75e-22,76;CL:0000048,5.70e-13,427;CL:0002494,1.61e-12,16;CL:0000222,1.87e-12,121;CL:0000723,4.09e-12,433;CL:0000034,4.96e-11,441;CL:0002539,2.28e-09,10;CL:0002334,4.43e-08,12;CL:0000349,1.63e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000514;1.77e-18;43!CL:0000355;1.72e-15;58 | |ontology_enrichment_development_v019=CL:0000514;1.77e-18;43!CL:0000355;1.72e-15;58 | ||
|ontology_enrichment_disease=DOID:2394!6.43e-08!14 | |ontology_enrichment_disease=DOID:2394!6.43e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.37e-09;14 | |ontology_enrichment_disease_v019=DOID:2394;7.37e-09;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,7.91e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.11e-25!83;UBERON:0002329!4.11e-25!83;UBERON:0003077!4.11e-25!83;UBERON:0003059!4.11e-25!83;UBERON:0007282!4.11e-25!83;UBERON:0009618!4.11e-25!83;UBERON:0007285!4.11e-25!83;UBERON:0004290!1.68e-24!70;UBERON:0002385!3.10e-23!63;UBERON:0001015!3.10e-23!63;UBERON:0000383!3.10e-23!63;UBERON:0001134!3.46e-23!61;UBERON:0002036!3.46e-23!61;UBERON:0003082!3.46e-23!61;UBERON:0000486!4.03e-22!82;UBERON:0004872!6.50e-16!84;UBERON:0005256!7.36e-16!143;UBERON:0001637!6.21e-13!42;UBERON:0003509!6.21e-13!42;UBERON:0004572!6.21e-13!42;UBERON:0002049!2.19e-12!79;UBERON:0007798!2.19e-12!79;UBERON:0004573!4.28e-12!33;UBERON:0004571!4.28e-12!33;UBERON:0002100!6.31e-12!216;UBERON:0004535!3.14e-11!110;UBERON:0001009!5.19e-11!113;UBERON:0000481!5.91e-11!347;UBERON:0000948!4.46e-10!24;UBERON:0005498!4.46e-10!24;UBERON:0004140!4.46e-10!24;UBERON:0009881!4.46e-10!24;UBERON:0004141!4.46e-10!24;UBERON:0003084!4.46e-10!24;UBERON:0007005!4.46e-10!24;UBERON:0004139!4.46e-10!24;UBERON:0004291!4.46e-10!24;UBERON:0001981!7.79e-10!60;UBERON:0007500!7.79e-10!60;UBERON:0004537!7.79e-10!60;UBERON:0006965!7.79e-10!60;UBERON:0000475!1.01e-09!365;UBERON:0003104!1.29e-09!238;UBERON:0009142!1.29e-09!238;UBERON:0000490!1.95e-09!138;UBERON:0001135!3.21e-09!15;UBERON:0007100!3.61e-09!27;UBERON:0003914!4.19e-09!118;UBERON:0000055!3.10e-08!69;UBERON:0004237!6.57e-08!10;UBERON:0004695!6.57e-08!10;UBERON:0002111!6.57e-08!10;UBERON:0004178!6.57e-08!10;UBERON:0000468!9.37e-08!659;UBERON:0004923!4.19e-07!57 | |ontology_enrichment_uberon=UBERON:0000914!4.11e-25!83;UBERON:0002329!4.11e-25!83;UBERON:0003077!4.11e-25!83;UBERON:0003059!4.11e-25!83;UBERON:0007282!4.11e-25!83;UBERON:0009618!4.11e-25!83;UBERON:0007285!4.11e-25!83;UBERON:0004290!1.68e-24!70;UBERON:0002385!3.10e-23!63;UBERON:0001015!3.10e-23!63;UBERON:0000383!3.10e-23!63;UBERON:0001134!3.46e-23!61;UBERON:0002036!3.46e-23!61;UBERON:0003082!3.46e-23!61;UBERON:0000486!4.03e-22!82;UBERON:0004872!6.50e-16!84;UBERON:0005256!7.36e-16!143;UBERON:0001637!6.21e-13!42;UBERON:0003509!6.21e-13!42;UBERON:0004572!6.21e-13!42;UBERON:0002049!2.19e-12!79;UBERON:0007798!2.19e-12!79;UBERON:0004573!4.28e-12!33;UBERON:0004571!4.28e-12!33;UBERON:0002100!6.31e-12!216;UBERON:0004535!3.14e-11!110;UBERON:0001009!5.19e-11!113;UBERON:0000481!5.91e-11!347;UBERON:0000948!4.46e-10!24;UBERON:0005498!4.46e-10!24;UBERON:0004140!4.46e-10!24;UBERON:0009881!4.46e-10!24;UBERON:0004141!4.46e-10!24;UBERON:0003084!4.46e-10!24;UBERON:0007005!4.46e-10!24;UBERON:0004139!4.46e-10!24;UBERON:0004291!4.46e-10!24;UBERON:0001981!7.79e-10!60;UBERON:0007500!7.79e-10!60;UBERON:0004537!7.79e-10!60;UBERON:0006965!7.79e-10!60;UBERON:0000475!1.01e-09!365;UBERON:0003104!1.29e-09!238;UBERON:0009142!1.29e-09!238;UBERON:0000490!1.95e-09!138;UBERON:0001135!3.21e-09!15;UBERON:0007100!3.61e-09!27;UBERON:0003914!4.19e-09!118;UBERON:0000055!3.10e-08!69;UBERON:0004237!6.57e-08!10;UBERON:0004695!6.57e-08!10;UBERON:0002111!6.57e-08!10;UBERON:0004178!6.57e-08!10;UBERON:0000468!9.37e-08!659;UBERON:0004923!4.19e-07!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.37e-14;33!UBERON:0004571;5.37e-14;33!UBERON:0001637;1.29e-11;42!UBERON:0003509;1.29e-11;42!UBERON:0004572;1.29e-11;42!UBERON:0000948;1.47e-10;22!UBERON:0001135;3.76e-10;15!UBERON:0004237;2.16e-09;10!UBERON:0004695;2.16e-09;10!UBERON:0002111;2.16e-09;10!UBERON:0004178;2.16e-09;10!UBERON:0007100;1.82e-08;25!UBERON:0002385;1.95e-08;31!UBERON:0001015;1.95e-08;31!UBERON:0000383;1.95e-08;31!UBERON:0000947;2.81e-07;21!UBERON:0010191;2.81e-07;21!UBERON:0006876;3.52e-07;11!UBERON:0000478;8.38e-07;24 | |ontology_enrichment_uberon_v019=UBERON:0004573;5.37e-14;33!UBERON:0004571;5.37e-14;33!UBERON:0001637;1.29e-11;42!UBERON:0003509;1.29e-11;42!UBERON:0004572;1.29e-11;42!UBERON:0000948;1.47e-10;22!UBERON:0001135;3.76e-10;15!UBERON:0004237;2.16e-09;10!UBERON:0004695;2.16e-09;10!UBERON:0002111;2.16e-09;10!UBERON:0004178;2.16e-09;10!UBERON:0007100;1.82e-08;25!UBERON:0002385;1.95e-08;31!UBERON:0001015;1.95e-08;31!UBERON:0000383;1.95e-08;31!UBERON:0000947;2.81e-07;21!UBERON:0010191;2.81e-07;21!UBERON:0006876;3.52e-07;11!UBERON:0000478;8.38e-07;24 | ||
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| ||
|short_description=p1@PAPPA | |short_description=p1@PAPPA | ||
}} | }} |
Latest revision as of 17:49, 24 September 2015
Short description: | p1@PAPPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAPPA_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000328252_5end |
EntrezGene: | PAPPA |
HGNC: | 8602 |
UniProt: | Q13219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 5.22e-30 | 55 |
muscle precursor cell | 2.82e-28 | 58 |
myoblast | 2.82e-28 | 58 |
multi-potent skeletal muscle stem cell | 2.82e-28 | 58 |
smooth muscle cell | 1.84e-25 | 43 |
smooth muscle myoblast | 1.84e-25 | 43 |
electrically responsive cell | 6.18e-25 | 61 |
electrically active cell | 6.18e-25 | 61 |
vascular associated smooth muscle cell | 5.63e-24 | 32 |
fibroblast | 1.75e-22 | 76 |
multi fate stem cell | 5.70e-13 | 427 |
cardiocyte | 1.61e-12 | 16 |
mesodermal cell | 1.87e-12 | 121 |
somatic stem cell | 4.09e-12 | 433 |
stem cell | 4.96e-11 | 441 |
aortic smooth muscle cell | 2.28e-09 | 10 |
preadipocyte | 4.43e-08 | 12 |
extraembryonic cell | 1.63e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.91e-09 | 14 |