FFCP PHASE1:Hg19::chr17:42264322..42264376,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79089 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28459 | |||
|TSSclassifier=strong | |||
|UniProt=Q71RG4,E7ESS3 | |||
|association_with_transcript=0bp_to_ENST00000357984,ENST00000446571,NM_001076674,NM_024107,uc002ifo.2,uc002ifp.2,uc002ifq.2,uc002ifr.2,uc010wiu.1_5end | |||
|cluster_id=chr17:42264322..42264376,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_2_at_TMUB2_5end | |||
|id=chr17:42264322..42264376,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.65e-23!140;CL:0002057!8.76e-22!42;CL:0000860!6.59e-19!45;CL:0002031!1.84e-17!124;CL:0000766!2.96e-17!76;CL:0002087!3.48e-16!119;CL:0000839!1.99e-13!70;CL:0002009!3.88e-13!65;CL:0000557!7.08e-13!71;CL:0000037!1.02e-12!172;CL:0000566!1.02e-12!172;CL:0002194!2.42e-12!63;CL:0000576!2.42e-12!63;CL:0000040!2.42e-12!63;CL:0000559!2.42e-12!63;CL:0000988!1.06e-11!182;CL:0002032!9.91e-11!165;CL:0000837!9.91e-11!165;CL:0000791!2.60e-07!18;CL:0000789!2.60e-07!18;CL:0002420!2.60e-07!18;CL:0002419!2.60e-07!18;CL:0000790!2.60e-07!18;CL:0000763!3.97e-07!112;CL:0000049!3.97e-07!112;CL:0000094!7.05e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-16;33!CL:0002057;1.04e-16;33!CL:0000473;2.27e-12;39!CL:0000234;2.27e-12;39!CL:0000576;1.12e-11;48!CL:0000766;7.34e-10;69!CL:0000791;3.59e-07;18!CL:0000789;3.59e-07;18!CL:0002419;3.59e-07;18!CL:0000094;6.21e-07;8!CL:0002087;9.32e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.05e-25,136;CL:0000860,8.76e-22,42;CL:0002057,8.76e-22,42;CL:0000766,7.46e-20,72;CL:0002031,2.39e-19,120;CL:0000473,3.61e-19,48;CL:0000234,3.61e-19,48;CL:0002087,5.00e-18,115;CL:0000839,9.78e-16,66;CL:0002009,1.57e-15,61;CL:0000557,4.26e-15,67;CL:0002194,1.11e-14,59;CL:0000576,1.11e-14,59;CL:0000040,1.11e-14,59;CL:0000559,1.11e-14,59;CL:0000037,5.57e-14,168;CL:0000988,4.12e-13,177;CL:0002032,6.88e-12,161;CL:0000837,6.88e-12,161;CL:0000763,3.13e-08,108;CL:0000049,3.13e-08,108;CL:0000791,2.60e-07,18;CL:0000789,2.60e-07,18;CL:0002420,2.60e-07,18;CL:0002419,2.60e-07,18;CL:0000790,2.60e-07,18;CL:0000094,7.05e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.41e-16;42!CL:0000790;3.59e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-13!102;UBERON:0003061!1.27e-13!102;UBERON:0007023!2.52e-13!115;UBERON:0002193!1.08e-12!112;UBERON:0001049!1.37e-11!57;UBERON:0005068!1.37e-11!57;UBERON:0006241!1.37e-11!57;UBERON:0007135!1.37e-11!57;UBERON:0002371!8.12e-11!80;UBERON:0001893!1.02e-10!34;UBERON:0002020!2.43e-10!34;UBERON:0003528!2.43e-10!34;UBERON:0002791!2.64e-10!33;UBERON:0002619!3.57e-10!22;UBERON:0001869!3.68e-10!32;UBERON:0002780!8.36e-10!41;UBERON:0001890!8.36e-10!41;UBERON:0006240!8.36e-10!41;UBERON:0003080!1.16e-09!42;UBERON:0002616!1.26e-09!59;UBERON:0001950!1.80e-09!20;UBERON:0000956!4.55e-09!25;UBERON:0000203!4.55e-09!25;UBERON:0000955!7.77e-09!69;UBERON:0006238!7.77e-09!69;UBERON:0001474!8.13e-09!86;UBERON:0002405!1.04e-08!115;UBERON:0001017!1.20e-08!82;UBERON:0005743!1.36e-08!86;UBERON:0000073!2.08e-07!94;UBERON:0001016!2.08e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.11e-10;22!UBERON:0001950;1.56e-09;20!UBERON:0001893;1.91e-09;34!UBERON:0001869;2.40e-09;32!UBERON:0002791;3.26e-09;32!UBERON:0000956;4.00e-09;25!UBERON:0000203;4.00e-09;25!UBERON:0003528;5.22e-09;34!UBERON:0002020;5.22e-09;34!UBERON:0002780;1.95e-07;41!UBERON:0001890;1.95e-07;41!UBERON:0000073;5.27e-07;53!UBERON:0002616;5.27e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.96e-15,98;UBERON:0003061,1.96e-15,98;UBERON:0002193,2.53e-14,108;UBERON:0007023,4.86e-13,114;UBERON:0002371,1.25e-12,76;UBERON:0001049,1.02e-11,56;UBERON:0005068,1.02e-11,56;UBERON:0006241,1.02e-11,56;UBERON:0007135,1.02e-11,56;UBERON:0002405,1.10e-11,93;UBERON:0000073,1.91e-11,53;UBERON:0002616,1.91e-11,53;UBERON:0001893,1.02e-10,34;UBERON:0003528,2.43e-10,34;UBERON:0002020,2.43e-10,34;UBERON:0001474,2.57e-10,82;UBERON:0002619,3.57e-10,22;UBERON:0001869,3.68e-10,32;UBERON:0002791,5.83e-10,32;UBERON:0002780,8.36e-10,41;UBERON:0001890,8.36e-10,41;UBERON:0003080,8.36e-10,41;UBERON:0006240,8.36e-10,41;UBERON:0001950,1.80e-09,20;UBERON:0000956,4.55e-09,25;UBERON:0000203,4.55e-09,25;UBERON:0000955,6.67e-09,68;UBERON:0006238,6.67e-09,68;UBERON:0001017,1.06e-08,81;UBERON:0004765,1.43e-07,90;UBERON:0001016,1.87e-07,89 | |||
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| |||
|short_description=p2@TMUB2 | |||
}} |
Latest revision as of 19:49, 24 September 2015
Short description: | p2@TMUB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMUB2_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000357984, ENST00000446571, NM_001076674, NM_024107, uc002ifo.2, uc002ifp.2, uc002ifq.2, uc002ifr.2, uc010wiu.1_5end |
EntrezGene: | TMUB2 |
HGNC: | 28459 |
UniProt: | Q71RG4E7ESS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.05e-25 | 136 |
classical monocyte | 8.76e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.76e-22 | 42 |
myeloid leukocyte | 7.46e-20 | 72 |
hematopoietic lineage restricted progenitor cell | 2.39e-19 | 120 |
defensive cell | 3.61e-19 | 48 |
phagocyte | 3.61e-19 | 48 |
nongranular leukocyte | 5.00e-18 | 115 |
myeloid lineage restricted progenitor cell | 9.78e-16 | 66 |
macrophage dendritic cell progenitor | 1.57e-15 | 61 |
granulocyte monocyte progenitor cell | 4.26e-15 | 67 |
monopoietic cell | 1.11e-14 | 59 |
monocyte | 1.11e-14 | 59 |
monoblast | 1.11e-14 | 59 |
promonocyte | 1.11e-14 | 59 |
hematopoietic stem cell | 5.57e-14 | 168 |
hematopoietic cell | 4.12e-13 | 177 |
hematopoietic oligopotent progenitor cell | 6.88e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.88e-12 | 161 |
myeloid cell | 3.13e-08 | 108 |
common myeloid progenitor | 3.13e-08 | 108 |
mature alpha-beta T cell | 2.60e-07 | 18 |
alpha-beta T cell | 2.60e-07 | 18 |
immature T cell | 2.60e-07 | 18 |
mature T cell | 2.60e-07 | 18 |
immature alpha-beta T cell | 2.60e-07 | 18 |
granulocyte | 7.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.96e-15 | 98 |
blood island | 1.96e-15 | 98 |
hemolymphoid system | 2.53e-14 | 108 |
adult organism | 4.86e-13 | 114 |
bone marrow | 1.25e-12 | 76 |
neural tube | 1.02e-11 | 56 |
neural rod | 1.02e-11 | 56 |
future spinal cord | 1.02e-11 | 56 |
neural keel | 1.02e-11 | 56 |
immune system | 1.10e-11 | 93 |
regional part of nervous system | 1.91e-11 | 53 |
regional part of brain | 1.91e-11 | 53 |
telencephalon | 1.02e-10 | 34 |
brain grey matter | 2.43e-10 | 34 |
gray matter | 2.43e-10 | 34 |
bone element | 2.57e-10 | 82 |
regional part of cerebral cortex | 3.57e-10 | 22 |
cerebral hemisphere | 3.68e-10 | 32 |
regional part of telencephalon | 5.83e-10 | 32 |
regional part of forebrain | 8.36e-10 | 41 |
forebrain | 8.36e-10 | 41 |
anterior neural tube | 8.36e-10 | 41 |
future forebrain | 8.36e-10 | 41 |
neocortex | 1.80e-09 | 20 |
cerebral cortex | 4.55e-09 | 25 |
pallium | 4.55e-09 | 25 |
brain | 6.67e-09 | 68 |
future brain | 6.67e-09 | 68 |
central nervous system | 1.06e-08 | 81 |
skeletal element | 1.43e-07 | 90 |
nervous system | 1.87e-07 | 89 |