FFCP PHASE1:Hg19::chr19:8642289..8642353,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4542 | |EntrezGene=4542 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7600 | |HGNC=7600 | ||
|TSSclassifier=strong | |||
|UniProt=O00160,Q4LE34 | |UniProt=O00160,Q4LE34 | ||
|association_with_transcript=0bp_to_ENST00000338257,NM_012335,uc002mkg.2,uc002mkh.2,uc010xkf.1_5end | |association_with_transcript=0bp_to_ENST00000338257,NM_012335,uc002mkg.2,uc002mkh.2,uc010xkf.1_5end | ||
|cluster_id=chr19:8642289..8642353,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_1_at_MYO1F_5end | |description=CAGE_peak_1_at_MYO1F_5end | ||
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|ontology_enrichment_celltype=CL:0000037!3.26e-71!172;CL:0000566!3.26e-71!172;CL:0002032!1.51e-67!165;CL:0000837!1.51e-67!165;CL:0000988!2.67e-63!182;CL:0000738!2.00e-58!140;CL:0000763!2.66e-53!112;CL:0000049!2.66e-53!112;CL:0002031!6.51e-48!124;CL:0002087!9.64e-47!119;CL:0000766!1.82e-41!76;CL:0000557!1.66e-36!71;CL:0000839!2.79e-35!70;CL:0002009!1.20e-33!65;CL:0002194!5.34e-33!63;CL:0000576!5.34e-33!63;CL:0000040!5.34e-33!63;CL:0000559!5.34e-33!63;CL:0002057!4.08e-30!42;CL:0000860!2.48e-26!45;CL:0000134!3.26e-15!358;CL:0002320!1.16e-13!365;CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!2.76e-12!52;CL:0000219!2.28e-10!390;CL:0000791!1.93e-09!18;CL:0000789!1.93e-09!18;CL:0002420!1.93e-09!18;CL:0002419!1.93e-09!18;CL:0000790!1.93e-09!18;CL:0000084!7.88e-09!25;CL:0000827!7.88e-09!25;CL:0000094!1.86e-07!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000625!7.43e-07!11 | |ontology_enrichment_celltype=CL:0000037!3.26e-71!172;CL:0000566!3.26e-71!172;CL:0002032!1.51e-67!165;CL:0000837!1.51e-67!165;CL:0000988!2.67e-63!182;CL:0000738!2.00e-58!140;CL:0000763!2.66e-53!112;CL:0000049!2.66e-53!112;CL:0002031!6.51e-48!124;CL:0002087!9.64e-47!119;CL:0000766!1.82e-41!76;CL:0000557!1.66e-36!71;CL:0000839!2.79e-35!70;CL:0002009!1.20e-33!65;CL:0002194!5.34e-33!63;CL:0000576!5.34e-33!63;CL:0000040!5.34e-33!63;CL:0000559!5.34e-33!63;CL:0002057!4.08e-30!42;CL:0000860!2.48e-26!45;CL:0000134!3.26e-15!358;CL:0002320!1.16e-13!365;CL:0000542!1.74e-12!53;CL:0000051!1.74e-12!53;CL:0000838!2.76e-12!52;CL:0000219!2.28e-10!390;CL:0000791!1.93e-09!18;CL:0000789!1.93e-09!18;CL:0002420!1.93e-09!18;CL:0002419!1.93e-09!18;CL:0000790!1.93e-09!18;CL:0000084!7.88e-09!25;CL:0000827!7.88e-09!25;CL:0000094!1.86e-07!8;CL:0002393!2.13e-07!9;CL:0002397!2.13e-07!9;CL:0000625!7.43e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-24;33!CL:0002057;1.38e-24;33!CL:0000473;6.04e-24;39!CL:0000234;6.04e-24;39!CL:0000576;9.81e-24;48!CL:0000766;1.25e-21;69!CL:0000763;4.37e-18;100!CL:0000738;6.24e-15;136!CL:0002087;9.92e-15;104!CL:0000988;5.04e-12;177!CL:0000791;1.83e-10;18!CL:0000789;1.83e-10;18!CL:0002419;1.83e-10;18!CL:0000084;5.08e-10;25!CL:0000094;3.24e-08;8!CL:0000542;4.07e-08;53!CL:0000625;1.57e-07;11 | |ontology_enrichment_celltype_v019=CL:0000860;1.38e-24;33!CL:0002057;1.38e-24;33!CL:0000473;6.04e-24;39!CL:0000234;6.04e-24;39!CL:0000576;9.81e-24;48!CL:0000766;1.25e-21;69!CL:0000763;4.37e-18;100!CL:0000738;6.24e-15;136!CL:0002087;9.92e-15;104!CL:0000988;5.04e-12;177!CL:0000791;1.83e-10;18!CL:0000789;1.83e-10;18!CL:0002419;1.83e-10;18!CL:0000084;5.08e-10;25!CL:0000094;3.24e-08;8!CL:0000542;4.07e-08;53!CL:0000625;1.57e-07;11 | ||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.06e-80,168;CL:0002032,6.14e-77,161;CL:0000837,6.14e-77,161;CL:0000988,1.28e-72,177;CL:0000738,6.97e-69,136;CL:0000763,9.50e-62,108;CL:0000049,9.50e-62,108;CL:0002031,1.20e-57,120;CL:0002087,2.24e-56,115;CL:0000766,3.98e-52,72;CL:0000557,2.65e-46,67;CL:0000839,7.61e-45,66;CL:0002009,4.08e-43,61;CL:0002194,1.95e-42,59;CL:0000576,1.95e-42,59;CL:0000040,1.95e-42,59;CL:0000559,1.95e-42,59;CL:0000473,1.06e-37,48;CL:0000234,1.06e-37,48;CL:0000860,8.50e-34,42;CL:0002057,8.50e-34,42;CL:0000542,1.48e-13,53;CL:0000051,1.48e-13,53;CL:0000838,2.50e-13,52;CL:0000134,3.53e-12,354;CL:0002320,4.97e-11,361;CL:0000791,1.88e-10,18;CL:0000789,1.88e-10,18;CL:0002420,1.88e-10,18;CL:0002419,1.88e-10,18;CL:0000790,1.88e-10,18;CL:0000084,5.34e-10,25;CL:0000827,5.34e-10,25;CL:0000094,3.24e-08,8;CL:0002393,3.78e-08,9;CL:0002397,3.78e-08,9;CL:0000219,1.19e-07,386;CL:0000625,1.54e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.00e-24;42!CL:0000049;5.72e-17;108!CL:0000790;1.83e-10;18!CL:0000051;4.07e-08;53 | |ontology_enrichment_development_v019=CL:0002057;2.00e-24;42!CL:0000049;5.72e-17;108!CL:0000790;1.83e-10;18!CL:0000051;4.07e-08;53 | ||
|ontology_enrichment_disease=DOID:8692!4.25e-11!31;DOID:1240!2.21e-10!39;DOID:2531!5.36e-10!51;DOID:0060083!5.36e-10!51 | |ontology_enrichment_disease=DOID:8692!4.25e-11!31;DOID:1240!2.21e-10!39;DOID:2531!5.36e-10!51;DOID:0060083!5.36e-10!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.18e-09;31!DOID:1240;1.97e-07;39 | |ontology_enrichment_disease_v019=DOID:8692;1.18e-09;31!DOID:1240;1.97e-07;39 | ||
|ontology_enrichment_disease_v019_2=DOID:8692,4.44e-10,31;DOID:1240,7.46e-10,39;DOID:2531,4.57e-09,51;DOID:0060083,4.57e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.42e-40!102;UBERON:0003061!3.42e-40!102;UBERON:0002193!2.74e-35!112;UBERON:0002371!2.21e-31!80;UBERON:0001474!3.77e-27!86;UBERON:0007023!7.33e-26!115;UBERON:0002405!5.30e-24!115;UBERON:0004765!5.83e-21!101;UBERON:0001434!5.83e-21!101;UBERON:0002384!3.91e-13!375;UBERON:0001049!2.54e-07!57;UBERON:0005068!2.54e-07!57;UBERON:0006241!2.54e-07!57;UBERON:0007135!2.54e-07!57;UBERON:0003081!3.03e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!3.42e-40!102;UBERON:0003061!3.42e-40!102;UBERON:0002193!2.74e-35!112;UBERON:0002371!2.21e-31!80;UBERON:0001474!3.77e-27!86;UBERON:0007023!7.33e-26!115;UBERON:0002405!5.30e-24!115;UBERON:0004765!5.83e-21!101;UBERON:0001434!5.83e-21!101;UBERON:0002384!3.91e-13!375;UBERON:0001049!2.54e-07!57;UBERON:0005068!2.54e-07!57;UBERON:0006241!2.54e-07!57;UBERON:0007135!2.54e-07!57;UBERON:0003081!3.03e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.20e-07;114!UBERON:0000178;1.48e-07;15!UBERON:0000179;1.48e-07;15!UBERON:0000463;1.48e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0007023;1.20e-07;114!UBERON:0000178;1.48e-07;15!UBERON:0000179;1.48e-07;15!UBERON:0000463;1.48e-07;15 | ||
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| ||
|short_description=p1@MYO1F | |short_description=p1@MYO1F | ||
}} | }} |
Latest revision as of 01:12, 25 September 2015
Short description: | p1@MYO1F |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MYO1F_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 0bp_to_ENST00000338257, NM_012335, uc002mkg.2, uc002mkh.2, uc010xkf.1_5end |
EntrezGene: | MYO1F |
HGNC: | 7600 |
UniProt: | O00160Q4LE34 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.79e-51 | 98 |
blood island | 7.79e-51 | 98 |
hemolymphoid system | 9.37e-45 | 108 |
bone marrow | 1.91e-40 | 76 |
immune system | 1.18e-37 | 93 |
bone element | 5.11e-35 | 82 |
skeletal element | 5.24e-29 | 90 |
adult organism | 2.58e-28 | 114 |
skeletal system | 1.01e-23 | 100 |
lateral plate mesoderm | 2.13e-13 | 203 |
connective tissue | 2.37e-10 | 371 |
blood | 1.48e-07 | 15 |
haemolymphatic fluid | 1.48e-07 | 15 |
organism substance | 1.48e-07 | 15 |
musculoskeletal system | 3.73e-07 | 167 |
neural tube | 5.11e-07 | 56 |
neural rod | 5.11e-07 | 56 |
future spinal cord | 5.11e-07 | 56 |
neural keel | 5.11e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.44e-10 | 31 |
leukemia | 7.46e-10 | 39 |
hematologic cancer | 4.57e-09 | 51 |
immune system cancer | 4.57e-09 | 51 |