FFCP PHASE1:Hg19::chr7:107643412..107643428,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3912 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6486 | |||
|TSSclassifier=strong | |||
|UniProt=E9PCS6 | |||
|association_with_transcript=176bp_to_ENST00000393559_5end | |||
|cluster_id=chr7:107643412..107643428,- | |||
|coexpression_cluster_id=C4642 | |||
|description=CAGE_peak_2_at_LAMB1_5end | |||
|id=chr7:107643412..107643428,- | |||
|ontology_enrichment_celltype=CL:0000222!2.12e-23!119;CL:0000055!3.65e-20!180;CL:0002139!8.20e-17!24;CL:0000220!2.04e-16!246;CL:0002321!4.68e-16!248;CL:0000680!7.49e-14!57;CL:0000056!7.49e-14!57;CL:0000355!7.49e-14!57;CL:0000183!2.27e-13!59;CL:0000187!5.82e-13!54;CL:0000071!7.80e-13!18;CL:0002546!7.80e-13!18;CL:0000213!5.69e-12!57;CL:0000215!5.69e-12!57;CL:0000393!1.57e-11!60;CL:0000211!1.57e-11!60;CL:0000192!3.21e-10!42;CL:0000514!3.21e-10!42;CL:0000115!1.57e-09!35;CL:0000359!1.73e-09!32;CL:0000057!2.25e-08!75;CL:0002078!3.10e-08!44;CL:0002494!6.36e-08!16;CL:0000076!3.15e-07!62;CL:1000413!4.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.40e-19;24!CL:0000071;1.34e-14;18!CL:0000115;2.64e-10;36!CL:0000359;3.40e-10;32!CL:0002494;1.04e-08;16!CL:0000213;1.32e-08;58!CL:0000215;1.32e-08;58!CL:0000192;1.93e-08;43!CL:1000413;5.09e-08;9!CL:0000187;1.19e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.41e-26,121;CL:0002139,4.10e-19,24;CL:0000680,2.51e-15,58;CL:0000056,2.51e-15,58;CL:0000355,2.51e-15,58;CL:0000071,1.56e-14,18;CL:0002546,1.56e-14,18;CL:0000187,2.63e-14,55;CL:0000213,3.52e-14,58;CL:0000215,3.52e-14,58;CL:0002321,1.94e-12,250;CL:0000393,3.89e-12,61;CL:0000211,3.89e-12,61;CL:0000115,4.03e-12,36;CL:0000192,1.13e-11,43;CL:0000514,1.13e-11,43;CL:0000359,3.87e-11,32;CL:0002078,2.32e-09,45;CL:0002494,6.96e-09,16;CL:1000413,5.93e-08,9;CL:0000057,3.23e-07,76 | |||
|ontology_enrichment_development_v019=CL:0002546;1.34e-14;18!CL:0000514;1.93e-08;43!CL:0000355;5.81e-08;58!CL:0000222;2.15e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!5.33e-26!84;UBERON:0002049!1.90e-23!79;UBERON:0007798!1.90e-23!79;UBERON:0003914!9.19e-22!118;UBERON:0000490!1.89e-21!138;UBERON:0000055!3.25e-20!69;UBERON:0004535!1.16e-18!110;UBERON:0000119!1.22e-18!312;UBERON:0001009!1.69e-18!113;UBERON:0001981!2.56e-18!60;UBERON:0007500!2.56e-18!60;UBERON:0004537!2.56e-18!60;UBERON:0006965!2.56e-18!60;UBERON:0000468!3.19e-18!659;UBERON:0000483!3.67e-18!309;UBERON:0000477!5.06e-16!286;UBERON:0001134!4.35e-15!61;UBERON:0002036!4.35e-15!61;UBERON:0003082!4.35e-15!61;UBERON:0002385!6.07e-15!63;UBERON:0001015!6.07e-15!63;UBERON:0000383!6.07e-15!63;UBERON:0001637!6.91e-15!42;UBERON:0003509!6.91e-15!42;UBERON:0004572!6.91e-15!42;UBERON:0000467!6.63e-14!625;UBERON:0005256!1.16e-13!143;UBERON:0004290!1.16e-13!70;UBERON:0004111!1.17e-13!241;UBERON:0000480!1.22e-13!626;UBERON:0000481!1.88e-13!347;UBERON:0000475!2.08e-13!365;UBERON:0001986!7.80e-13!18;UBERON:0004638!7.80e-13!18;UBERON:0004852!7.80e-13!18;UBERON:0002100!1.01e-12!216;UBERON:0000914!1.37e-12!83;UBERON:0002329!1.37e-12!83;UBERON:0003077!1.37e-12!83;UBERON:0003059!1.37e-12!83;UBERON:0007282!1.37e-12!83;UBERON:0009618!1.37e-12!83;UBERON:0007285!1.37e-12!83;UBERON:0000486!1.76e-12!82;UBERON:0000922!2.54e-11!612;UBERON:0000487!2.71e-11!22;UBERON:0002050!5.79e-11!605;UBERON:0005423!5.79e-11!605;UBERON:0004573!6.31e-11!33;UBERON:0004571!6.31e-11!33;UBERON:0000923!1.35e-10!604;UBERON:0005291!1.35e-10!604;UBERON:0006598!1.35e-10!604;UBERON:0002532!1.35e-10!604;UBERON:0000025!1.69e-10!194;UBERON:0003104!2.13e-10!238;UBERON:0009142!2.13e-10!238;UBERON:0006914!2.21e-10!25;UBERON:0000947!2.44e-08!21;UBERON:0010191!2.44e-08!21;UBERON:0000948!3.37e-08!24;UBERON:0005498!3.37e-08!24;UBERON:0004140!3.37e-08!24;UBERON:0009881!3.37e-08!24;UBERON:0004141!3.37e-08!24;UBERON:0003084!3.37e-08!24;UBERON:0007005!3.37e-08!24;UBERON:0004139!3.37e-08!24;UBERON:0004291!3.37e-08!24;UBERON:0007100!9.43e-08!27;UBERON:0003915!4.11e-07!9;UBERON:0004700!4.11e-07!9;UBERON:0001917!4.11e-07!9;UBERON:0003103!7.33e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.34e-14;18!UBERON:0001986;1.34e-14;18!UBERON:0004852;1.34e-14;18!UBERON:0001637;3.55e-13;42!UBERON:0003509;3.55e-13;42!UBERON:0004572;3.55e-13;42!UBERON:0000055;6.41e-13;65!UBERON:0007500;2.73e-12;56!UBERON:0001981;2.73e-12;56!UBERON:0004537;2.73e-12;56!UBERON:0004573;8.63e-12;33!UBERON:0004571;8.63e-12;33!UBERON:0002049;1.12e-11;75!UBERON:0007798;1.12e-11;75!UBERON:0000487;1.91e-11;22!UBERON:0006914;7.15e-10;25!UBERON:0000947;3.34e-09;21!UBERON:0010191;3.34e-09;21!UBERON:0003914;6.20e-09;74!UBERON:0003915;5.09e-08;9!UBERON:0004700;5.09e-08;9!UBERON:0001917;5.09e-08;9!UBERON:0000490;5.16e-08;33!UBERON:0000948;1.01e-07;22!UBERON:0002385;1.43e-07;31!UBERON:0001015;1.43e-07;31!UBERON:0000383;1.43e-07;31!UBERON:0004535;1.80e-07;109!UBERON:0001009;2.79e-07;112!UBERON:0007100;3.01e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.97e-29,83;UBERON:0002049,5.38e-27,78;UBERON:0007798,5.38e-27,78;UBERON:0004535,6.66e-24,109;UBERON:0001009,1.74e-23,112;UBERON:0000055,2.87e-23,68;UBERON:0003914,1.01e-21,117;UBERON:0007500,1.31e-20,59;UBERON:0001981,1.31e-20,59;UBERON:0004537,1.31e-20,59;UBERON:0006965,1.31e-20,59;UBERON:0000490,2.15e-20,148;UBERON:0001637,6.51e-17,42;UBERON:0003509,6.51e-17,42;UBERON:0004572,6.51e-17,42;UBERON:0001134,9.67e-17,62;UBERON:0002036,9.67e-17,62;UBERON:0003082,9.67e-17,62;UBERON:0002385,3.99e-16,64;UBERON:0001015,3.99e-16,64;UBERON:0000383,3.99e-16,64;UBERON:0007503,4.30e-15,78;UBERON:0002329,5.78e-15,71;UBERON:0003059,5.78e-15,71;UBERON:0007282,5.78e-15,71;UBERON:0004290,5.78e-15,71;UBERON:0009618,5.78e-15,71;UBERON:0007524,9.11e-15,73;UBERON:0004638,1.56e-14,18;UBERON:0001986,1.56e-14,18;UBERON:0004852,1.56e-14,18;UBERON:0003077,1.93e-14,72;UBERON:0007285,1.93e-14,72;UBERON:0005256,1.10e-13,122;UBERON:0000486,2.64e-13,83;UBERON:0003104,5.76e-13,160;UBERON:0009142,5.76e-13,160;UBERON:0002100,1.02e-12,199;UBERON:0000119,1.86e-12,309;UBERON:0004573,2.36e-12,33;UBERON:0004571,2.36e-12,33;UBERON:0000483,4.96e-12,306;UBERON:0000487,2.31e-11,22;UBERON:0006914,7.50e-10,25;UBERON:0004111,3.86e-09,240;UBERON:0000947,3.99e-09,21;UBERON:0010191,3.99e-09,21;UBERON:0000926,7.79e-09,315;UBERON:0004120,7.79e-09,315;UBERON:0006603,7.79e-09,315;UBERON:0000948,1.18e-08,24;UBERON:0005498,1.18e-08,24;UBERON:0004140,1.18e-08,24;UBERON:0009881,1.18e-08,24;UBERON:0004141,1.18e-08,24;UBERON:0003084,1.18e-08,24;UBERON:0007005,1.18e-08,24;UBERON:0004139,1.18e-08,24;UBERON:0004291,1.18e-08,24;UBERON:0007100,5.40e-08,27;UBERON:0003915,5.93e-08,9;UBERON:0004700,5.93e-08,9;UBERON:0001917,5.93e-08,9 | |||
|phase1_expression=9.44727572206894,4.06790995392868,6.3429481843187,2.00146596706261,4.02264984984559,1.74467704820074,5.06599756336621,1.26343974685366,3.13422753839806,0.982935746006035,0,1.31064823278103,0.791300934685361,1.48519623552056,0.994192127183747,5.3786011716142,6.62963980826375,4.38186054232424,3.41552959153355,0.492484232307152,0.204000691244253,0.626909442956176,1.14494394852423,1.23186982565596,1.12988375635323,0,0,0,0,0,0.464448369948228,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,4.02420515822182,9.84541726195184,0,2.00535164254356,1.30361867064741,2.3858578411533,0.973269740605272,2.3633704291017,2.66075276955077,2.28370442802128,1.11332214173056,0.364295288292542,0.370784442784429,0,0,0,0,0,0,13.1183188862025,6.881876760849,10.4142150482278,13.0020826642522,22.233470119125,19.8084990196849,12.3307030256718,9.56142008926517,14.9421830328418,17.0707512509982,11.2792208790561,9.88353737434066,13.6674752226975,4.04429388380456,22.6839745406893,14.9130546234413,7.85852804191594,10.8107021263989,15.3316637465883,10.4419222552494,13.5569290508501,0,0,0,0.496971951695318,5.69837302490609,7.94455084879313,6.59724227722272,2.4826786753885,5.04609840128076,5.33744978648525,5.92002116201184,12.7596524513904,8.75619368452972,6.70193802765181,2.27036141467397,8.06646294271999,0.234321431833797,3.43376084513353,3.99330275081114,1.19558944441441,0.469737994575059,0.485618833104395,0.280901613404497,2.44985005505872,0.982674538494144,1.54988671763648,1.18800285728205,1.23633464639278,0,1.43723628363248,0.336672227908132,0.750711119231785,2.21651292387346,1.31693286264251,0.919463387397059,1.35214253015937,9.30143901912172,2.69084453533293,1.49490172172997,3.17897851739343,6.30191301777245,0.721367704669072,0.772921620136887,1.48893485065272,6.24472429292685,0.779496041289589,3.02920529092937,2.57739716198438,0.484938170456436,4.9701342952326,1.41052937518696,1.52604533079439,1.73934767846967,1.90922284413584,1.72082757233402,0.243947412259191,0.265059536642971,0.464775771478074,0.621966330092223,1.51392510525377,0,0,3.85944562915731,0,2.3218396401599,2.16563844500876,0.591534000199219,0.505754070234305,0,0.441175890929576,1.08939722046203,0.71181185733329,0.269662616320329,0.588664395376038,1.15424147083917,0.738155454624648,0,4.115740113314,5.88034845542168,0,0,3.54473944008842,0,1.47586126251736,3.60292401626904,0.219500570817251,0,0.100528972411631,2.40729957412177,0.325808305310325,0,7.21656710126366,0.579652024875384,7.74897381956423,23.6760974328161,14.8155364024515,10.4639783729029,0,0,0,0,0,0,1.51183915378974,0.992425680696705,1.79117045405697,1.16253575405585,1.15014803749563,0,0,0,0,0.25248486685276,0.253991577168676,0,0,0,0.925447434329912,0.901029173531752,0.857479297891735,1.12131084345361,1.30788020649984,5.7203862940341,2.32689088364,7.15312891703765,8.45302752556,2.92531928243358,4.16029747645464,0.514414748524284,0,0,10.8663275180192,14.650783345569,0.823240336780769,5.21177894869976,10.3063665135338,4.75171123760058,5.72734816413214,9.58686804460323,8.49770425047485,0,0,0,4.55287225434007,0,4.27910715122155,2.89562613335158,2.4657158706046,4.83464600747718,0,0,0,0,0.76228387266739,0,1.54657762555539,1.34013012267479,0.637938751653163,0,0,0,2.08575535922538,1.00034104211935,0.271265023699736,1.03985430765404,0.178428988797162,0.473107245101804,0.35142424497814,0.902838299183157,2.27407504055985,2.0694614258501,4.64957918974806,0.553107505625109,1.65078867489357,1.37060810223918,1.37257369524342,0,0,0,1.81876542867756,3.32870879020994,3.0239029332968,1.48864684691266,4.75732117192994,3.08726103876381,2.94720043288112,2.55853624533352,3.86049410744658,0,2.31314540703983,2.66342587969691,3.28508624055237,3.63478100428535,1.27831416305955,0.846016147141356,2.6065841139427,0.460404944679482,3.21480454860899,2.00300284807389,2.49136388422906,2.70719767744447,4.85196623757813,2.35304930753057,2.92278449306521,6.54420099135829,0,2.55140557914773,11.4435435534134,1.54227252690289,1.35473218771926,2.50844886927427,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,0.656029291399411,0.650756789328606,1.95777922130672,0.183138929636687,0.577566499444116,0.574265537996172,0.650060246036521,3.21367859688319,2.03008508413456,0.616194468458578,1.99554777143968,0.413509717453592,6.87489567156951,4.64053420525531,2.89770533214743,2.75999310504886,4.29740779938543,3.2672311452068,3.82838137483752,0.910420027699949,0,2.83331112147576,2.0911118104818,6.16067160352178,3.19383618190213,3.47973196830029,10.0075078316117,2.71937284809783,2.97726695487734,6.96034734381197,6.29079639948622,0.255897791311334,3.42351190427136,3.81843897511124,3.92474320099615,4.67668389716618,3.29444435683266,3.18093486333353,4.85237955775958,1.58510321173008,2.10629228119491,1.46290121726877,5.36169677188826,0,0.4094997342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| |||
|short_description=p2@LAMB1 | |||
}} |
Latest revision as of 02:16, 25 September 2015
Short description: | p2@LAMB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LAMB1_5end |
Coexpression cluster: | C4642_liposarcoma_extraskeletal_Endothelial_Lymphatic_Mesenchymal_large_glioblastoma |
Association with transcript: | 176bp_to_ENST00000393559_5end |
EntrezGene: | LAMB1 |
HGNC: | 6486 |
UniProt: | E9PCS6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.41e-26 | 121 |
endothelial cell of vascular tree | 4.10e-19 | 24 |
muscle precursor cell | 2.51e-15 | 58 |
myoblast | 2.51e-15 | 58 |
multi-potent skeletal muscle stem cell | 2.51e-15 | 58 |
blood vessel endothelial cell | 1.56e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.56e-14 | 18 |
muscle cell | 2.63e-14 | 55 |
lining cell | 3.52e-14 | 58 |
barrier cell | 3.52e-14 | 58 |
embryonic cell | 1.94e-12 | 250 |
electrically responsive cell | 3.89e-12 | 61 |
electrically active cell | 3.89e-12 | 61 |
endothelial cell | 4.03e-12 | 36 |
smooth muscle cell | 1.13e-11 | 43 |
smooth muscle myoblast | 1.13e-11 | 43 |
vascular associated smooth muscle cell | 3.87e-11 | 32 |
meso-epithelial cell | 2.32e-09 | 45 |
cardiocyte | 6.96e-09 | 16 |
endothelial cell of artery | 5.93e-08 | 9 |
fibroblast | 3.23e-07 | 76 |