FFCP PHASE1:Hg19::chr1:220702128..220702137,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:220702128..220702137,+
|short_description=p9@MARK1
|description=CAGE_peak_9_at_MARK1_5end
|association_with_transcript=-54bp_to_ENST00000485104_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4139 | |EntrezGene=4139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6896 | |HGNC=6896 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-54bp_to_ENST00000485104_5end | |||
|cluster_id=chr1:220702128..220702137,+ | |||
|description=CAGE_peak_9_at_MARK1_5end | |||
|id=chr1:220702128..220702137,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000123;4.82e-07;2!CL:0000242;4.82e-07;2!CL:0002319;8.25e-07;25!CL:0000047;8.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,4.83e-07,2;CL:0002319,9.13e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.74e-33;3!UBERON:0006238;1.36e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.72e-31!82;UBERON:0005743!3.59e-30!86;UBERON:0000073!5.31e-30!94;UBERON:0001016!5.31e-30!94;UBERON:0001049!8.28e-27!57;UBERON:0005068!8.28e-27!57;UBERON:0006241!8.28e-27!57;UBERON:0007135!8.28e-27!57;UBERON:0000955!2.74e-24!69;UBERON:0006238!2.74e-24!69;UBERON:0004121!4.83e-24!169;UBERON:0000924!6.80e-23!173;UBERON:0006601!6.80e-23!173;UBERON:0002616!2.51e-22!59;UBERON:0003075!4.41e-22!86;UBERON:0007284!4.41e-22!86;UBERON:0000033!1.11e-21!123;UBERON:0007023!4.12e-21!115;UBERON:0000153!9.49e-21!129;UBERON:0007811!9.49e-21!129;UBERON:0002346!2.42e-20!90;UBERON:0002780!1.33e-19!41;UBERON:0001890!1.33e-19!41;UBERON:0006240!1.33e-19!41;UBERON:0002020!1.65e-19!34;UBERON:0003528!1.65e-19!34;UBERON:0001893!5.94e-19!34;UBERON:0003080!6.84e-19!42;UBERON:0002791!3.88e-18!33;UBERON:0001869!7.29e-18!32;UBERON:0002619!2.79e-17!22;UBERON:0000956!7.37e-16!25;UBERON:0000203!7.37e-16!25;UBERON:0003056!1.97e-15!61;UBERON:0001950!5.27e-15!20;UBERON:0003076!3.97e-09!15;UBERON:0003057!3.97e-09!15;UBERON:0000922!5.32e-08!612;UBERON:0000477!1.73e-07!286;UBERON:0000200!2.29e-07!6;UBERON:0004111!3.44e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.60e-17;22!UBERON:0002037;4.24e-17;6!UBERON:0000956;3.76e-15;25!UBERON:0000203;3.76e-15;25!UBERON:0000955;2.14e-14;68!UBERON:0001950;2.50e-13;20!UBERON:0001017;8.83e-13;75!UBERON:0001016;1.01e-12;83!UBERON:0002146;2.32e-12;1!UBERON:0005623;2.32e-12;1!UBERON:0002680;1.33e-11;9!UBERON:0001895;1.33e-11;9!UBERON:0002791;3.03e-11;32!UBERON:0001869;3.60e-11;32!UBERON:0003528;8.44e-11;34!UBERON:0002020;8.44e-11;34!UBERON:0000073;6.54e-10;53!UBERON:0002616;6.54e-10;53!UBERON:0002021;9.27e-10;5!UBERON:0001893;1.99e-09;34!UBERON:0004733;7.76e-09;12!UBERON:0002028;7.76e-09;12!UBERON:0000200;1.55e-08;6!UBERON:0004732;3.39e-08;13!UBERON:0002771;5.26e-07;2!UBERON:0002702;5.26e-07;2!UBERON:0001954;8.28e-07;2!UBERON:0003022;8.28e-07;2!UBERON:0002421;8.28e-07;2!UBERON:0002600;8.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.96e-24,81;UBERON:0001016,1.38e-21,89;UBERON:0000955,4.40e-21,68;UBERON:0006238,4.40e-21,68;UBERON:0002619,3.99e-17,22;UBERON:0002037,6.08e-17,6;UBERON:0006215,6.08e-17,6;UBERON:0004121,3.25e-16,171;UBERON:0000924,3.25e-16,171;UBERON:0006601,3.25e-16,171;UBERON:0000073,1.73e-15,53;UBERON:0002616,1.73e-15,53;UBERON:0000956,4.12e-15,25;UBERON:0000203,4.12e-15,25;UBERON:0001049,1.29e-14,56;UBERON:0005068,1.29e-14,56;UBERON:0006241,1.29e-14,56;UBERON:0007135,1.29e-14,56;UBERON:0001950,2.93e-13,20;UBERON:0002146,3.45e-12,1;UBERON:0005623,3.45e-12,1;UBERON:0003075,5.56e-12,82;UBERON:0007284,5.56e-12,82;UBERON:0002791,7.86e-12,32;UBERON:0001869,7.86e-12,32;UBERON:0002680,1.69e-11,9;UBERON:0001895,1.69e-11,9;UBERON:0010092,1.69e-11,9;UBERON:0002346,2.28e-11,86;UBERON:0010371,3.01e-11,104;UBERON:0003528,3.91e-11,34;UBERON:0002020,3.91e-11,34;UBERON:0001893,3.91e-11,34;UBERON:0002021,1.21e-09,5;UBERON:0002780,3.26e-09,41;UBERON:0001890,3.26e-09,41;UBERON:0003080,3.26e-09,41;UBERON:0006240,3.26e-09,41;UBERON:0011216,7.02e-09,223;UBERON:0004733,9.25e-09,12;UBERON:0002028,9.25e-09,12;UBERON:0007277,9.25e-09,12;UBERON:0000200,1.55e-08,6;UBERON:0004732,3.99e-08,13;UBERON:0003076,4.16e-07,15;UBERON:0003057,4.16e-07,15;UBERON:0002771,5.11e-07,2;UBERON:0002702,5.41e-07,2;UBERON:0010314,5.75e-07,132;UBERON:0001954,7.20e-07,2;UBERON:0003022,7.20e-07,2;UBERON:0002421,7.20e-07,2;UBERON:0002600,7.20e-07,2;UBERON:0007023,9.85e-07,114 | |||
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| ||
|short_description=p9@MARK1 | |||
}} | }} |
Latest revision as of 06:38, 25 September 2015
Short description: | p9@MARK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MARK1_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_ENST00000485104_5end |
EntrezGene: | MARK1 |
HGNC: | 6896 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.83e-07 | 2 |
neural cell | 9.13e-07 | 25 |