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FFCP PHASE1:Mm9::chr19:37250545..37250568,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr19:37250545..37250568,-
|DHSsupport=NA
|short_description=p4@Cpeb3
|DPIdataset=NA
|description=CAGE_peak_4_at_Cpeb3_5end
|association_with_transcript=0bp_to_ENSMUST00000142973,ENSMUST00000154376_5end
|EntrezGene=208922
|EntrezGene=208922
|HGNC=
|HGNC=
|MCL_coexpression_id=3188
|TSSclassifier=NA
|UniProt=D3Z5F3,Q7TN99
|UniProt=D3Z5F3,Q7TN99
|association_with_transcript=0bp_to_ENSMUST00000142973,ENSMUST00000154376_5end
|cluster_id=chr19:37250545..37250568,-
|description=CAGE_peak_4_at_Cpeb3_5end
|id=chr19:37250545..37250568,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004111!1.43e-11!122;UBERON:0000025!2.11e-10!114;UBERON:0000955!1.31e-08!50;UBERON:0006238!1.31e-08!50;UBERON:0001049!1.42e-08!52;UBERON:0005068!1.42e-08!52;UBERON:0006241!1.42e-08!52;UBERON:0007135!1.42e-08!52;UBERON:0000033!3.20e-08!63;UBERON:0002616!3.99e-08!49;UBERON:0001017!4.90e-08!73;UBERON:0005743!4.90e-08!73;UBERON:0004535!5.74e-08!23;UBERON:0001009!5.74e-08!23;UBERON:0004121!1.39e-07!102;UBERON:0000924!1.39e-07!102;UBERON:0006601!1.39e-07!102;UBERON:0003103!2.34e-07!43;UBERON:0000073!3.26e-07!75;UBERON:0001016!3.26e-07!75;UBERON:0002021!3.31e-07!10;UBERON:0000411!3.31e-07!10;UBERON:0001950!3.31e-07!10;UBERON:0002020!3.47e-07!34;UBERON:0007100!8.07e-07!18;UBERON:0000948!8.07e-07!18;UBERON:0005498!8.07e-07!18;UBERON:0004140!8.07e-07!18;UBERON:0009881!8.07e-07!18;UBERON:0004141!8.07e-07!18;UBERON:0003084!8.07e-07!18;UBERON:0007005!8.07e-07!18;UBERON:0004139!8.07e-07!18;UBERON:0004291!8.07e-07!18;UBERON:0002346!9.64e-07!71;UBERON:0003075!9.64e-07!71;UBERON:0007284!9.64e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0004111,5.05e-16,122;UBERON:0000025,7.86e-16,114;UBERON:0010314,1.44e-14,92;UBERON:0000073,5.57e-13,54;UBERON:0001049,1.69e-11,52;UBERON:0005068,1.69e-11,52;UBERON:0006241,1.69e-11,52;UBERON:0007135,1.69e-11,52;UBERON:0002021,3.68e-10,10;UBERON:0000411,3.68e-10,10;UBERON:0001950,3.68e-10,10;UBERON:0000955,1.77e-09,47;UBERON:0006238,1.77e-09,47;UBERON:0001017,1.82e-09,73;UBERON:0004535,2.13e-09,23;UBERON:0001009,2.13e-09,23;UBERON:0002020,2.86e-09,34;UBERON:0003103,2.87e-09,43;UBERON:0001016,6.68e-09,75;UBERON:0002346,8.10e-09,64;UBERON:0003075,8.10e-09,64;UBERON:0007284,8.10e-09,64;UBERON:0002616,8.14e-09,46;UBERON:0004121,3.43e-08,95;UBERON:0000924,3.43e-08,95;UBERON:0006601,3.43e-08,95;UBERON:0007100,3.47e-08,18;UBERON:0000948,3.47e-08,18;UBERON:0005498,3.47e-08,18;UBERON:0004140,3.47e-08,18;UBERON:0009881,3.47e-08,18;UBERON:0004141,3.47e-08,18;UBERON:0003084,3.47e-08,18;UBERON:0007005,3.47e-08,18;UBERON:0004139,3.47e-08,18;UBERON:0004291,3.47e-08,18;UBERON:0000483,8.38e-08,174;UBERON:0010371,9.03e-08,73;UBERON:0000119,1.68e-07,176;UBERON:0003528,3.26e-07,29;UBERON:0002791,3.26e-07,29;UBERON:0001893,3.26e-07,29;UBERON:0002619,7.02e-07,17;UBERON:0003080,7.41e-07,40
|phase1_expression=0.320297694209588,0.697950815278722,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,2.55129870453209,0,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,2.39203954153597,1.31790010585369,1.10128051297009,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,0,1.26766280701236,0,0,0.449949858640699,0.988866362566974,0,0,0,0.414758449233911,0.135005938331691,0,1.71390590642282,1.54607978666129,0.244981598429908,0.479227355091182,0,5.50579404996943,6.89511625660014,5.52983519722476,0.395658863190582,0.274462930807229,0.52091337055676,4.4669279840221,2.8138130501584,4.12555268997387,2.06240009831567,2.42031857358475,1.1183966749518,0,0,0.579728977403356,0,0,0,0,1.79210754838934,1.40444420131752,0.681721290312231,0.519572009205738,0.70667914902068,0.422530259330042,2.56652954828636,2.54805239706646,0,0,0,0,2.62622923353838,0.258937883647172,1.48442139064825,0,0,0,0.904335843315735,0.587943535678524,1.63366568728578,0,5.35017620603673,0,0.808834249737046,0.662524555381181,2.42437626567611,1.86391761218122,7.61230072230023,8.3778682725382,1.02182822083437,0,0,0,7.48953197024113,1.37250180845588,2.26177833803156,9.21268897019065,7.41574826257959,5.81806524766768,5.353961681236,0.203678727700633,1.61729061793121,1.51633655060205,1.68353484709179,0,0,0,0.60281927134286,0.476255494059295,0.512454881139399,0.468508622798644,2.58703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.828503090142008,1.40715635988658,1.08037236876609,2.84093682702252,2.95146347621106,2.93107514486019,5.34828072925938,4.02410102099429,4.55384835231961,4.77223564749093,4.59668899421467,9.24184428822755,8.47959927066927,8.34290438105992,9.5286557319864,5.46753866266731,1.85228302282712,1.98251269790279,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,1.59313018603494,0,0,0,0.814605311381257,0.581857461502877,0.98190147846446,1.89709611372772,3.69025369949005,3.1399745568275,4.07210640941942,0.296452627087149,0,0,0,0,0.241177159752417,0,0.863088412352432,5.5125977103512,0,0,1.11642284300551,0.936113019343682,1.26289438973556,2.15276896226295,4.3419916922703,1.29327233116623,0,0,0,0,0.167506257441816,0,0,0.630540576424764,0.664394068946325,1.11618338060241,0.655453258862952,1.89953480052485,1.73578870297814,0,0,0.983528546038072,2.48343071674259,8.0275294993896,7.73597131508541,0,3.53459298086122,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,6.42642632843614,0.851640511249612,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,1.42598951353889,2.21225730555071,0,2.06271086496374,2.04263763452273,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0.42366414172764,0.661585194164886,2.80306630000516,0.645857706783622,0.663442174209714,0.716234064018819,0.492422699235184,0.582961673259701,5.00648315428376,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,1.23980183588004,2.35580347785627,0.648074866458964,13.0481255748254,0.56369293868419,0,0,0.583353565032143,0.129159823477731,0.844780627453891,0.117357238645754,0.2604087696879,0.209718688851422,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0.389762468933385,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,4.53460767230423,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0.428736758158132,1.00314420807073,3.3885110557024,6.44455331110048,5.15605962095457,4.64003592327956,7.53590771747707,6.7985450765073,4.05013500139084,8.10578165803597,5.89085131679466,5.69536342927002,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.919217542250071,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,0.936415074698824,0.448176066834085,1.14870937911227,0,1.15884325944855,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,0.564656282491984,0.507687647350059,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,1.0835493061312,1.22769312950907,0.77468420592983,0.964533054905707,0.749431733813838,0.935726433781634,0.644613162144895,1.53030665655075,1.54413993383661,3.2461496986859
|phase1_expression=0.320297694209588,0.697950815278722,0,1.20985684522732,1.50268718983904,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,2.55129870453209,0,0,0.159992422793407,0,0.57423196411502,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0.683045484958446,0,2.39203954153597,1.31790010585369,1.10128051297009,0,0.218025156380447,0,0.58328969722285,0.279972843250725,0,0,0,0,0,0.573066879877513,0.515672092277442,1.21389876515759,0,1.26766280701236,0,0,0.449949858640699,0.988866362566974,0,0,0,0.414758449233911,0.135005938331691,0,1.71390590642282,1.54607978666129,0.244981598429908,0.479227355091182,0,5.50579404996943,6.89511625660014,5.52983519722476,0.395658863190582,0.274462930807229,0.52091337055676,4.4669279840221,2.8138130501584,4.12555268997387,2.06240009831567,2.42031857358475,1.1183966749518,0,0,0.579728977403356,0,0,0,0,1.79210754838934,1.40444420131752,0.681721290312231,0.519572009205738,0.70667914902068,0.422530259330042,2.56652954828636,2.54805239706646,0,0,0,0,2.62622923353838,0.258937883647172,1.48442139064825,0,0,0,0.904335843315735,0.587943535678524,1.63366568728578,0,5.35017620603673,0,0.808834249737046,0.662524555381181,2.42437626567611,1.86391761218122,7.61230072230023,8.3778682725382,1.02182822083437,0,0,0,7.48953197024113,1.37250180845588,2.26177833803156,9.21268897019065,7.41574826257959,5.81806524766768,5.353961681236,0.203678727700633,1.61729061793121,1.51633655060205,1.68353484709179,0,0,0,0.60281927134286,0.476255494059295,0.512454881139399,0.468508622798644,2.58703370739016,0,0,0,0,0,0.348252166522167,0.411564272815887,0,0,0,0,0.828503090142008,1.40715635988658,1.08037236876609,2.84093682702252,2.95146347621106,2.93107514486019,5.34828072925938,4.02410102099429,4.55384835231961,4.77223564749093,4.59668899421467,9.24184428822755,8.47959927066927,8.34290438105992,9.5286557319864,5.46753866266731,1.85228302282712,1.98251269790279,0.264450566663544,0,0,0.128867461322093,0.403367049246685,0,0,0,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0.432276099749388,1.59313018603494,0,0,0,0.814605311381257,0.581857461502877,0.98190147846446,1.89709611372772,3.69025369949005,3.1399745568275,4.07210640941942,0.296452627087149,0,0,0,0,0.241177159752417,0,0.863088412352432,5.5125977103512,0,0,1.11642284300551,0.936113019343682,1.26289438973556,2.15276896226295,4.3419916922703,1.29327233116623,0,0,0,0,0.167506257441816,0,0,0.630540576424764,0.664394068946325,1.11618338060241,0.655453258862952,1.89953480052485,1.73578870297814,0,0,0.983528546038072,2.48343071674259,8.0275294993896,7.73597131508541,0,3.53459298086122,0.631016438832513,0.390438744296638,0.215423397732799,0.477937595905104,0.445597348164788,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,6.42642632843614,0.851640511249612,0.178065603667255,0.325773918707152,0.164970122972535,0,0,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.727067458955011,1.42598951353889,2.21225730555071,0,2.06271086496374,2.04263763452273,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.329098041204242,0.913394847343798,0,0.42366414172764,0.661585194164886,2.80306630000516,0.645857706783622,0.663442174209714,0.716234064018819,0.492422699235184,0.582961673259701,5.00648315428376,0,0,0.370389054739423,0.188368457004691,0.136694227721025,0,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0.436725127492355,0,1.23980183588004,2.35580347785627,0.648074866458964,13.0481255748254,0.56369293868419,0,0,0.583353565032143,0.129159823477731,0.844780627453891,0.117357238645754,0.2604087696879,0.209718688851422,0.483168241652012,0.288030006257865,0.316011120628178,0,0,0.389762468933385,0,0,0.120195449519969,0,0.201932899896295,0,0,0.0974578807397524,0.0962118416403295,0.116876902181569,4.53460767230423,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0.428736758158132,1.00314420807073,3.3885110557024,6.44455331110048,5.15605962095457,4.64003592327956,7.53590771747707,6.7985450765073,4.05013500139084,8.10578165803597,5.89085131679466,5.69536342927002,0.103787347584177,0.399024873401031,0.170733605754134,0.486213434136588,0.419226325255965,0.919217542250071,0.222246727801615,0.618105171716683,0.64183841918363,0.505394423527595,1.01391719956096,0.754505365544305,0.936415074698824,0.448176066834085,1.14870937911227,0,1.15884325944855,0.578727661391115,0.824171801606613,0.147198920134397,0.685738504770831,0.887379030796687,0.953744759789284,1.45346416632329,0.564656282491984,0.507687647350059,0.548783918618318,0.789209134313529,0.814824683075171,0.561142271657738,0.949080144993393,1.0835493061312,1.22769312950907,0.77468420592983,0.964533054905707,0.749431733813838,0.935726433781634,0.644613162144895,1.53030665655075,1.54413993383661,3.2461496986859
|short_description=p4@Cpeb3
}}
}}

Latest revision as of 16:34, 25 September 2015

Short description:p4@Cpeb3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Cpeb3_5end
Coexpression cluster:MCL_coexpression_mm9:3188
Association with transcript: 0bp_to_ENSMUST00000142973, ENSMUST00000154376_5end
EntrezGene:Cpeb3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Cpeb3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.21
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.55
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.39
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.10
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.40
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.13
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.79
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.63
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H15.35
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.61
cerebellum, neonate N30.CNhs11135.1395-42I28.38
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F12.26
cortex, adult.CNhs10473.12-14D59.21
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F25.82
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.62
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.48
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.47
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D42.84
heart, embryo E15.CNhs11017.431-16C82.95
heart, embryo E16.CNhs11021.457-17C62.93
heart, embryo E17.CNhs11025.479-18E55.35
heart, embryo E18.CNhs11030.1283-20G34.02
heart, neonate N00.CNhs11213.639-21E34.55
heart, neonate N03.CNhs11221.1349-25I24.77
heart, neonate N10.CNhs11118.749-24G14.60
heart, neonate N16.CNhs11209.782-15G19.24
heart, neonate N20.CNhs11127.821-26I68.48
heart, neonate N25.CNhs11196.1351-25D38.34
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G11.85
intestinal mucosa, adult.CNhs10506.860-29I31.98
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.59
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.98
kidney, neonate N10.CNhs11206.758-6D51.90
kidney, neonate N20.CNhs11113.832-19I13.69
kidney, neonate N25.CNhs11122.1353-25F33.14
kidney, neonate N30.CNhs11203.1385-42H14.07
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.15
liver, neonate N30.CNhs11106.1382-42D14.34
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E61.12
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C71.90
lung, neonate N30.CNhs11133.1394-42H21.74
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H22.48
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A37.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B62.21
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.01
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B44.53
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.39
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.44
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.16
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A47.54
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.89
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
anatomical conduit5.05e-16122
tube7.86e-16114
structure with developmental contribution from neural crest1.44e-1492
regional part of nervous system5.57e-1354
neural tube1.69e-1152
neural rod1.69e-1152
future spinal cord1.69e-1152
neural keel1.69e-1152
occipital lobe3.68e-1010
visual cortex3.68e-1010
neocortex3.68e-1010
brain1.77e-0947
future brain1.77e-0947
central nervous system1.82e-0973
cardiovascular system2.13e-0923
circulatory system2.13e-0923
gray matter2.86e-0934
compound organ2.87e-0943
nervous system6.68e-0975
neurectoderm8.10e-0964
neural plate8.10e-0964
presumptive neural plate8.10e-0964
regional part of brain8.14e-0946
ectoderm-derived structure3.43e-0895
ectoderm3.43e-0895
presumptive ectoderm3.43e-0895
primary circulatory organ3.47e-0818
heart3.47e-0818
primitive heart tube3.47e-0818
primary heart field3.47e-0818
anterior lateral plate mesoderm3.47e-0818
heart tube3.47e-0818
heart primordium3.47e-0818
cardiac mesoderm3.47e-0818
cardiogenic plate3.47e-0818
heart rudiment3.47e-0818
epithelium8.38e-08174
ecto-epithelium9.03e-0873
cell layer1.68e-07176
brain grey matter3.26e-0729
regional part of telencephalon3.26e-0729
telencephalon3.26e-0729
regional part of cerebral cortex7.02e-0717
anterior neural tube7.41e-0740
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