FFCP PHASE1:Mm9::chr2:130468506..130468547,-: Difference between revisions
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{{FFCP|EntrezGene=241638|HGNC=|MCL_coexpression_id=1|UniProt=A2AHG0|association_with_transcript=0bp_to_ENSMUST00000045761,NM_197945,uc008mjq.2,uc012ceh.1_5end|description=CAGE_peak_1_at_Prosapip1_5end|id=chr2:130468506..130468547,-|ontology_enrichment_celltype=CL:0000117!6.37e-07!23;CL:0000337!6.37e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-07,23;CL:0000337,6.12e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-14!73;UBERON:0005743!1.25e-14!73;UBERON:0001049!3.96e-14!52;UBERON:0005068!3.96e-14!52;UBERON:0006241!3.96e-14!52;UBERON:0007135!3.96e-14!52;UBERON:0000073!1.72e-13!75;UBERON:0001016!1.72e-13!75;UBERON:0000955!2.90e-13!50;UBERON:0006238!2.90e-13!50;UBERON:0002616!8.69e-13!49;UBERON:0002346!4.80e-12!71;UBERON:0003075!4.80e-12!71;UBERON:0007284!4.80e-12!71;UBERON:0000033!1.68e-11!63;UBERON:0002020!2.17e-11!34;UBERON:0004121!5.13e-09!102;UBERON:0000924!5.13e-09!102;UBERON:0006601!5.13e-09!102;UBERON:0002791!6.87e-09!29;UBERON:0003528!6.87e-09!29;UBERON:0001893!6.87e-09!29;UBERON:0003080!7.69e-09!40;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0003056!4.27e-08!49;UBERON:0000025!5.67e-08!114;UBERON:0002021!2.37e-07!10;UBERON:0000411!2.37e-07!10;UBERON:0001950!2.37e-07!10;UBERON:0004111!4.75e-07!122;UBERON:0003076!9.39e-07!12;UBERON:0003057!9.39e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.01e-15,54;UBERON:0001017,1.22e-14,73;UBERON:0001049,3.61e-14,52;UBERON:0005068,3.61e-14,52;UBERON:0006241,3.61e-14,52;UBERON:0007135,3.61e-14,52;UBERON:0001016,1.99e-13,75;UBERON:0002346,1.54e-12,64;UBERON:0003075,1.54e-12,64;UBERON:0007284,1.54e-12,64;UBERON:0000955,1.19e-11,47;UBERON:0006238,1.19e-11,47;UBERON:0002020,2.02e-11,34;UBERON:0002616,3.44e-11,46;UBERON:0003528,6.51e-09,29;UBERON:0002791,6.51e-09,29;UBERON:0001893,6.51e-09,29;UBERON:0003080,7.29e-09,40;UBERON:0004121,7.55e-09,95;UBERON:0000924,7.55e-09,95;UBERON:0006601,7.55e-09,95;UBERON:0010371,1.77e-08,73;UBERON:0002780,2.26e-08,39;UBERON:0001890,2.26e-08,39;UBERON:0006240,2.26e-08,39;UBERON:0003056,4.07e-08,49;UBERON:0000025,5.41e-08,114;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10;UBERON:0004111,4.73e-07,122;UBERON:0011216,5.62e-07,194;UBERON:0003076,9.03e-07,12;UBERON:0003057,9.03e-07,12|phase1_expression=4.48416771893423,1.74487703819681,1.81999695755814,8.16653370528441,4.50806156951712,4.36486106970913,4.43864017131499,0.387369970324729,7.32101355188667,8.89445200023575,0.34243593645101,0.478632953972018,0.856003649656029,0.786783621770977,0.333109761815663,0.404950534779652,0,0.473193248037357,0.411343300817216,1.27316895539409,20.66551950671,0.397163804803541,0.783599367416806,1.27993938234725,2.75291137280604,2.29692785646008,1.7230479846363,2.58565479223067,4.56056206695297,3.2763916868791,2.88249663851896,0.635030673459631,0,0,8.37669697278696,6.81562045969819,12.2501613757421,0,0,0.523523743973798,0,0.683045484958446,0,7.55380907853464,6.18399280439039,4.58866880404204,15.6478268869608,4.14247797122848,4.17403747195497,3.30530828426282,4.33957907038624,2.87505128729943,0.838913030288682,2.90144856804538,2.01656279485478,2.31533492432352,1.14613375975503,1.54701627683233,8.49729135610311,8.99284664762456,8.23980824558033,1.35537812827653,7.11435836888911,1.7997994345628,2.96659908770092,0.7104801149461,6.89080254192331,13.4476406862544,4.25127410464758,3.10513658162888,1.68259969081106,29.4220513935918,27.8294361599033,4.28717797252339,3.54628242767475,2.75765635983006,31.9336054898227,26.6866536598042,23.6554061214615,7.78129097608144,7.593474419,5.73004707612436,28.7558488971422,29.826418331679,25.3645091309505,22.3917724959987,17.6540884190888,11.7431650869939,0.832988126665025,1.96486056277642,5.2175607966302,6.88339101585109,7.47968467078526,14.0322829825832,16.2444104361917,12.9927797258227,12.0782201313307,10.2258193546835,5.45550609666024,7.77347063922748,2.67602497575693,7.69958864485907,7.64415719119937,28.4426681261332,0.432982082022428,0.506719730950197,1.51657333504435,15.186456002635,0,6.23456984072264,2.4287945747259,4.26251669636998,3.68984795609694,4.06951129492081,3.17489509266403,3.39299796590124,3.70792451601561,1.01219549843938,2.65383165584962,1.94120219936891,0.441683036920787,0.969750506270444,3.72783522436244,20.2018749937968,44.193255137639,6.13096932500619,0.239630249011841,0,0.254140454146129,26.5129431746536,93.3301229749998,6.91098936620754,52.3211203778752,56.7688315273334,28.8825381937789,44.6163473436334,2.34230536855727,2.48813941220186,2.52722758433675,1.05220927943237,2.73252930221678,3.90833577536904,2.70093194708024,5.57607825992146,4.01415344992834,5.12454881139399,4.12287588062807,4.65666067330228,2.15567992932842,2.45837904218165,4.22282697993477,2.41115305670332,2.22437799380478,2.78601733217733,2.05782136407943,2.7864797354589,2.80885274925294,0.257347907114715,0,2.07125772535502,1.17263029990548,1.2604344302271,2.6041920914373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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241638 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=A2AHG0 | |||
|association_with_transcript=0bp_to_ENSMUST00000045761,NM_197945,uc008mjq.2,uc012ceh.1_5end | |||
|cluster_id=chr2:130468506..130468547,- | |||
|description=CAGE_peak_1_at_Prosapip1_5end | |||
|id=chr2:130468506..130468547,- | |||
|ontology_enrichment_celltype=CL:0000117!6.37e-07!23;CL:0000337!6.37e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.12e-07,23;CL:0000337,6.12e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-14!73;UBERON:0005743!1.25e-14!73;UBERON:0001049!3.96e-14!52;UBERON:0005068!3.96e-14!52;UBERON:0006241!3.96e-14!52;UBERON:0007135!3.96e-14!52;UBERON:0000073!1.72e-13!75;UBERON:0001016!1.72e-13!75;UBERON:0000955!2.90e-13!50;UBERON:0006238!2.90e-13!50;UBERON:0002616!8.69e-13!49;UBERON:0002346!4.80e-12!71;UBERON:0003075!4.80e-12!71;UBERON:0007284!4.80e-12!71;UBERON:0000033!1.68e-11!63;UBERON:0002020!2.17e-11!34;UBERON:0004121!5.13e-09!102;UBERON:0000924!5.13e-09!102;UBERON:0006601!5.13e-09!102;UBERON:0002791!6.87e-09!29;UBERON:0003528!6.87e-09!29;UBERON:0001893!6.87e-09!29;UBERON:0003080!7.69e-09!40;UBERON:0002780!2.38e-08!39;UBERON:0001890!2.38e-08!39;UBERON:0006240!2.38e-08!39;UBERON:0003056!4.27e-08!49;UBERON:0000025!5.67e-08!114;UBERON:0002021!2.37e-07!10;UBERON:0000411!2.37e-07!10;UBERON:0001950!2.37e-07!10;UBERON:0004111!4.75e-07!122;UBERON:0003076!9.39e-07!12;UBERON:0003057!9.39e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.01e-15,54;UBERON:0001017,1.22e-14,73;UBERON:0001049,3.61e-14,52;UBERON:0005068,3.61e-14,52;UBERON:0006241,3.61e-14,52;UBERON:0007135,3.61e-14,52;UBERON:0001016,1.99e-13,75;UBERON:0002346,1.54e-12,64;UBERON:0003075,1.54e-12,64;UBERON:0007284,1.54e-12,64;UBERON:0000955,1.19e-11,47;UBERON:0006238,1.19e-11,47;UBERON:0002020,2.02e-11,34;UBERON:0002616,3.44e-11,46;UBERON:0003528,6.51e-09,29;UBERON:0002791,6.51e-09,29;UBERON:0001893,6.51e-09,29;UBERON:0003080,7.29e-09,40;UBERON:0004121,7.55e-09,95;UBERON:0000924,7.55e-09,95;UBERON:0006601,7.55e-09,95;UBERON:0010371,1.77e-08,73;UBERON:0002780,2.26e-08,39;UBERON:0001890,2.26e-08,39;UBERON:0006240,2.26e-08,39;UBERON:0003056,4.07e-08,49;UBERON:0000025,5.41e-08,114;UBERON:0002021,2.27e-07,10;UBERON:0000411,2.27e-07,10;UBERON:0001950,2.27e-07,10;UBERON:0004111,4.73e-07,122;UBERON:0011216,5.62e-07,194;UBERON:0003076,9.03e-07,12;UBERON:0003057,9.03e-07,12 | |||
|phase1_expression=4.48416771893423,1.74487703819681,1.81999695755814,8.16653370528441,4.50806156951712,4.36486106970913,4.43864017131499,0.387369970324729,7.32101355188667,8.89445200023575,0.34243593645101,0.478632953972018,0.856003649656029,0.786783621770977,0.333109761815663,0.404950534779652,0,0.473193248037357,0.411343300817216,1.27316895539409,20.66551950671,0.397163804803541,0.783599367416806,1.27993938234725,2.75291137280604,2.29692785646008,1.7230479846363,2.58565479223067,4.56056206695297,3.2763916868791,2.88249663851896,0.635030673459631,0,0,8.37669697278696,6.81562045969819,12.2501613757421,0,0,0.523523743973798,0,0.683045484958446,0,7.55380907853464,6.18399280439039,4.58866880404204,15.6478268869608,4.14247797122848,4.17403747195497,3.30530828426282,4.33957907038624,2.87505128729943,0.838913030288682,2.90144856804538,2.01656279485478,2.31533492432352,1.14613375975503,1.54701627683233,8.49729135610311,8.99284664762456,8.23980824558033,1.35537812827653,7.11435836888911,1.7997994345628,2.96659908770092,0.7104801149461,6.89080254192331,13.4476406862544,4.25127410464758,3.10513658162888,1.68259969081106,29.4220513935918,27.8294361599033,4.28717797252339,3.54628242767475,2.75765635983006,31.9336054898227,26.6866536598042,23.6554061214615,7.78129097608144,7.593474419,5.73004707612436,28.7558488971422,29.826418331679,25.3645091309505,22.3917724959987,17.6540884190888,11.7431650869939,0.832988126665025,1.96486056277642,5.2175607966302,6.88339101585109,7.47968467078526,14.0322829825832,16.2444104361917,12.9927797258227,12.0782201313307,10.2258193546835,5.45550609666024,7.77347063922748,2.67602497575693,7.69958864485907,7.64415719119937,28.4426681261332,0.432982082022428,0.506719730950197,1.51657333504435,15.186456002635,0,6.23456984072264,2.4287945747259,4.26251669636998,3.68984795609694,4.06951129492081,3.17489509266403,3.39299796590124,3.70792451601561,1.01219549843938,2.65383165584962,1.94120219936891,0.441683036920787,0.969750506270444,3.72783522436244,20.2018749937968,44.193255137639,6.13096932500619,0.239630249011841,0,0.254140454146129,26.5129431746536,93.3301229749998,6.91098936620754,52.3211203778752,56.7688315273334,28.8825381937789,44.6163473436334,2.34230536855727,2.48813941220186,2.52722758433675,1.05220927943237,2.73252930221678,3.90833577536904,2.70093194708024,5.57607825992146,4.01415344992834,5.12454881139399,4.12287588062807,4.65666067330228,2.15567992932842,2.45837904218165,4.22282697993477,2.41115305670332,2.22437799380478,2.78601733217733,2.05782136407943,2.7864797354589,2.80885274925294,0.257347907114715,0,2.07125772535502,1.17263029990548,1.2604344302271,2.60419209143731,2.16440654922144,2.46827380619805,2.09280550275367,2.68273401399619,1.05088808130453,2.63295759861569,2.62667942526552,1.13496333364198,2.04679982395465,2.19550115291051,2.81833479396781,50.8901675525188,4.01327988279209,4.29544417878937,2.64450566663544,1.49301775374664,2.32236671860439,4.76809606891745,6.6555563125703,7.78323153457046,10.8428606884159,8.54152310780121,13.6700132420929,19.8554814952213,21.6862554524854,23.9805827156518,7.19055526923377,5.61958929674205,5.97423819763102,2.65535061334314,5.02693455482807,9.01661885384643,5.7022371796688,9.50367187121366,11.6425461017929,12.6473074248515,21.2558613090627,18.0548537017581,24.9262271122037,17.1942523710546,1.50160595144485,1.76903095601883,2.69834534861824,2.84004169943904,4.82354319504834,4.07401362850272,3.74004978686054,9.72811360650212,6.31491250332587,8.62609239164127,8.18710084870708,10.6092808858951,10.6083128737787,7.17589654087649,21.7099584613515,2.03228509183265,2.4633883530163,4.07412441105065,2.03694102930226,1.87752198630802,2.84760637651087,1.90434912708811,3.70753930929818,2.67979744980525,1.55025282754142,2.39182152986231,2.13022309130459,3.45369963731791,1.73578870297814,4.52373851817817,2.17562273527484,1.47529281905711,0.827810238914197,17.3394637186815,20.2776217804511,2.45902418065013,1.26235463602186,2.83957397474631,3.51394869866975,2.80050417052639,3.82350076724083,0.668396022247182,2.54768877709949,2.42886421004937,2.63030272120181,1.58115111178609,17.6726724031994,4.5420827266646,4.80777129901589,2.76907830901079,8.24850614862677,5.30980553359851,1.94224508923985,3.62788268357701,4.52652191414155,5.02013217897314,4.61152721915891,4.39328098385976,2.54473610634254,2.85197902707777,6.32073515871632,2.10837217149998,1.03135543248187,3.40439605753788,1.98067203434441,1.81102157295856,3.00071849044229,2.48276327099183,4.8159580752559,4.11372551505302,7.00269382963578,1.64270195644597,1.90648863777438,1.98475558249466,1.48397627647332,1.13025098687134,0.784068024066026,1.07435109602823,0.984845398470368,10.2018292820448,16.3174265769249,1.19609616558497,2.68302928352189,1.11116716421827,0.565105371014073,0.546776910884101,0.686334519619568,0.679913719975421,0.279902904647316,0.414599921413271,0.954670618015114,2.53068794864908,4.47302827679067,3.99619761040665,3.13632444021703,4.58561383866973,2.69728692769641,3.96736587481612,4.97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| |||
|short_description=p1@Prosapip1 | |||
}} |
Latest revision as of 17:51, 25 September 2015
Short description: | p1@Prosapip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Prosapip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000045761, NM_197945, uc008mjq.2, uc012ceh.1_5end |
EntrezGene: | Prosapip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.12e-07 | 23 |
neuroblast (sensu Vertebrata) | 6.12e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.01e-15 | 54 |
central nervous system | 1.22e-14 | 73 |
neural tube | 3.61e-14 | 52 |
neural rod | 3.61e-14 | 52 |
future spinal cord | 3.61e-14 | 52 |
neural keel | 3.61e-14 | 52 |
nervous system | 1.99e-13 | 75 |
neurectoderm | 1.54e-12 | 64 |
neural plate | 1.54e-12 | 64 |
presumptive neural plate | 1.54e-12 | 64 |
brain | 1.19e-11 | 47 |
future brain | 1.19e-11 | 47 |
gray matter | 2.02e-11 | 34 |
regional part of brain | 3.44e-11 | 46 |
brain grey matter | 6.51e-09 | 29 |
regional part of telencephalon | 6.51e-09 | 29 |
telencephalon | 6.51e-09 | 29 |
anterior neural tube | 7.29e-09 | 40 |
ectoderm-derived structure | 7.55e-09 | 95 |
ectoderm | 7.55e-09 | 95 |
presumptive ectoderm | 7.55e-09 | 95 |
ecto-epithelium | 1.77e-08 | 73 |
regional part of forebrain | 2.26e-08 | 39 |
forebrain | 2.26e-08 | 39 |
future forebrain | 2.26e-08 | 39 |
pre-chordal neural plate | 4.07e-08 | 49 |
tube | 5.41e-08 | 114 |
occipital lobe | 2.27e-07 | 10 |
visual cortex | 2.27e-07 | 10 |
neocortex | 2.27e-07 | 10 |
anatomical conduit | 4.73e-07 | 122 |
organ system subdivision | 5.62e-07 | 194 |
posterior neural tube | 9.03e-07 | 12 |
chordal neural plate | 9.03e-07 | 12 |