Personal tools

FFCP PHASE1:Mm9::chr3:87804070..87804102,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12032
|EntrezGene=12032
|HGNC=
|HGNC=
|MCL_coexpression_id=428
|TSSclassifier=NA
|UniProt=Q61361,Q3TSQ8
|UniProt=Q61361,Q3TSQ8
|association_with_transcript=175bp_to_ENSMUST00000090971,NM_001109758,NM_007529,uc008pto.2,uc008ptp.2_5end
|association_with_transcript=175bp_to_ENSMUST00000090971,NM_001109758,NM_007529,uc008pto.2,uc008ptp.2_5end
|cluster_id=chr3:87804070..87804102,-
|description=CAGE_peak_1_at_Bcan_5end
|description=CAGE_peak_1_at_Bcan_5end
|id=chr3:87804070..87804102,-
|id=chr3:87804070..87804102,-
|ontology_enrichment_celltype=CL:0000221!3.48e-17!44;CL:0000133!3.48e-17!44;CL:0002319!5.48e-17!43;CL:0000117!9.28e-16!23;CL:0000337!9.28e-16!23;CL:0000055!1.37e-12!50;CL:0000540!2.94e-12!33;CL:0000047!2.94e-12!33;CL:0000031!2.94e-12!33;CL:0000404!2.94e-12!33;CL:0000393!8.50e-09!39;CL:0000211!8.50e-09!39
|ontology_enrichment_celltype=CL:0000221!3.48e-17!44;CL:0000133!3.48e-17!44;CL:0002319!5.48e-17!43;CL:0000117!9.28e-16!23;CL:0000337!9.28e-16!23;CL:0000055!1.37e-12!50;CL:0000540!2.94e-12!33;CL:0000047!2.94e-12!33;CL:0000031!2.94e-12!33;CL:0000404!2.94e-12!33;CL:0000393!8.50e-09!39;CL:0000211!8.50e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,9.48e-19,23;CL:0000337,9.48e-19,23;CL:0002319,2.14e-16,43;CL:0000221,9.11e-16,44;CL:0000133,9.11e-16,44;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000393,2.66e-09,39;CL:0000211,2.66e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.56e-34!75;UBERON:0001016!1.56e-34!75;UBERON:0001017!3.07e-34!73;UBERON:0005743!3.07e-34!73;UBERON:0001049!1.18e-28!52;UBERON:0005068!1.18e-28!52;UBERON:0006241!1.18e-28!52;UBERON:0007135!1.18e-28!52;UBERON:0004121!1.04e-26!102;UBERON:0000924!1.04e-26!102;UBERON:0006601!1.04e-26!102;UBERON:0000955!2.14e-26!50;UBERON:0006238!2.14e-26!50;UBERON:0002616!1.51e-25!49;UBERON:0002020!1.49e-23!34;UBERON:0000033!8.56e-23!63;UBERON:0002346!8.57e-23!71;UBERON:0003075!8.57e-23!71;UBERON:0007284!8.57e-23!71;UBERON:0002791!4.64e-19!29;UBERON:0003528!4.64e-19!29;UBERON:0001893!4.64e-19!29;UBERON:0003080!9.41e-19!40;UBERON:0002780!6.81e-18!39;UBERON:0001890!6.81e-18!39;UBERON:0006240!6.81e-18!39;UBERON:0003056!9.36e-16!49;UBERON:0000956!2.47e-13!21;UBERON:0001869!2.47e-13!21;UBERON:0000203!2.47e-13!21;UBERON:0007811!7.12e-12!86;UBERON:0002619!3.36e-11!17;UBERON:0003076!1.17e-10!12;UBERON:0003057!1.17e-10!12;UBERON:0000153!3.27e-10!94;UBERON:0002021!1.16e-08!10;UBERON:0000411!1.16e-08!10;UBERON:0001950!1.16e-08!10;UBERON:0002420!5.94e-07!8;UBERON:0007245!5.94e-07!8;UBERON:0010009!5.94e-07!8;UBERON:0010011!5.94e-07!8;UBERON:0000454!5.94e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.90e-37,73;UBERON:0001016,1.42e-35,75;UBERON:0000073,1.02e-34,54;UBERON:0001049,7.25e-33,52;UBERON:0005068,7.25e-33,52;UBERON:0006241,7.25e-33,52;UBERON:0007135,7.25e-33,52;UBERON:0002020,3.37e-28,34;UBERON:0000955,2.67e-27,47;UBERON:0006238,2.67e-27,47;UBERON:0002616,2.63e-26,46;UBERON:0004121,1.40e-24,95;UBERON:0000924,1.40e-24,95;UBERON:0006601,1.40e-24,95;UBERON:0002346,1.52e-24,64;UBERON:0003075,1.52e-24,64;UBERON:0007284,1.52e-24,64;UBERON:0003528,9.46e-23,29;UBERON:0002791,9.46e-23,29;UBERON:0001893,9.46e-23,29;UBERON:0003080,4.99e-21,40;UBERON:0002780,5.25e-20,39;UBERON:0001890,5.25e-20,39;UBERON:0006240,5.25e-20,39;UBERON:0010371,1.89e-19,73;UBERON:0003056,7.04e-16,49;UBERON:0000956,8.22e-16,21;UBERON:0001869,8.22e-16,21;UBERON:0000203,8.22e-16,21;UBERON:0010314,1.81e-13,92;UBERON:0002619,3.15e-13,17;UBERON:0003076,1.42e-12,12;UBERON:0003057,1.42e-12,12;UBERON:0002021,3.71e-10,10;UBERON:0000411,3.71e-10,10;UBERON:0001950,3.71e-10,10;UBERON:0002420,4.30e-08,8;UBERON:0007245,4.30e-08,8;UBERON:0010009,4.30e-08,8;UBERON:0010011,4.30e-08,8;UBERON:0000454,4.30e-08,8;UBERON:0002240,1.13e-07,6;UBERON:0005174,1.13e-07,6;UBERON:0001137,1.13e-07,6
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,7.63088047331563,2.19686182734472,1.94429899074283,2.93971485413261,7.18762821824858,0,0,0,0,0,0,10.3181395038395,16.9277113367051,13.9442908771359,0,0,0,0,0,47.9360176829448,115.649709901788,3.42175720617976,3.24014251996058,4.20649922702764,102.263052416562,83.0465713978067,2.20483438586917,1.62937300731002,1.83843757322004,36.3382407297983,38.6892634398119,35.0222895824235,6.85808696197008,6.58711033937349,5.2091337055676,51.3696718162541,37.7050948721226,46.4506673241503,63.0505172913649,59.6537342548241,22.927131836512,0.37863096666592,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0,0,0,1.1418387971906,0,1.92974780784272,0,0.304465478312141,0.461230994512117,0,0.470354828542819,1.63366568728578,0,0,0,0,0,0,0,17.2740670236813,20.5257772677186,0,0,0,0,53.7748395463313,43.9200578705881,23.7486725493314,33.3742694769171,39.3801804288709,44.2588534911863,57.2711658629185,0,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0.937017245597288,1.81092359517311,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0,0.232533944750408,0,0,0,0,0,0,0,0,46.4740786326721,17.2879748797198,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9541651965817,60.7156536547612,0,0,0,0,0,0.955875191810208,1.11399337041197,1.98153571552183,0,0,0.395287777946524,41.7717711348349,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0,0.493647061806363,4.26250928760439,0,0,0.220528398054962,0,0,0,0,0,0,51.1773833549007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.897099276263873,0.330916980914195,1.75006069509643,2.45403664607689,2.70329800785245,3.87278887530988,3.6457227756306,3.04092098834561,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,42.9211400388971,39.5879703396172,38.3839994004396,33.5113705570191,38.364621107156,43.0574521512129,35.1011700120539,27.4695933966774,29.9073989929575,23.2992140288319,0,0,0.853668028770671,0.972426868273176,0.419226325255965,1.10306105070008,2.889207461421,1.64828045791115,4.1719497246936,4.04315538822076,3.04175159868288,2.64076877940507,2.43467919421694,3.52138338226781,2.1825478203133,1.42888107384922,2.43357084484197,3.47236596834669,2.47251540481984,2.35518272215036,1.37147700954166,2.12970967391205,3.33810665926249,2.61623549938191,2.72917203204459,2.79228206042532,4.024415403201,0.526139422875686,2.58027816307137,0,2.01679530811096,3.25064791839359,3.27384834535751,2.63392630016142,1.92906610981141,5.9954538705107,2.33931608445408,3.22306581072447,4.78220830172108,3.30887128679273,1.85494268496337
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.07911256435163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60630478782843,7.63088047331563,2.19686182734472,1.94429899074283,2.93971485413261,7.18762821824858,0,0,0,0,0,0,10.3181395038395,16.9277113367051,13.9442908771359,0,0,0,0,0,47.9360176829448,115.649709901788,3.42175720617976,3.24014251996058,4.20649922702764,102.263052416562,83.0465713978067,2.20483438586917,1.62937300731002,1.83843757322004,36.3382407297983,38.6892634398119,35.0222895824235,6.85808696197008,6.58711033937349,5.2091337055676,51.3696718162541,37.7050948721226,46.4506673241503,63.0505172913649,59.6537342548241,22.927131836512,0.37863096666592,0.226714680320357,0,0,0,0,0,0,1.12355536105401,0,0,0,0.845060518660083,0,0,0,0,0,0,1.1418387971906,0,1.92974780784272,0,0.304465478312141,0.461230994512117,0,0.470354828542819,1.63366568728578,0,0,0,0,0,0,0,17.2740670236813,20.5257772677186,0,0,0,0,53.7748395463313,43.9200578705881,23.7486725493314,33.3742694769171,39.3801804288709,44.2588534911863,57.2711658629185,0,0,0,0,0,0,0,0,0.136072998302656,0.384341160854549,0.937017245597288,1.81092359517311,0,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0.473489471170421,0,0,0.232533944750408,0,0,0,0,0,0,0,0,46.4740786326721,17.2879748797198,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,44.9541651965817,60.7156536547612,0,0,0,0,0,0.955875191810208,1.11399337041197,1.98153571552183,0,0,0.395287777946524,41.7717711348349,0.141940085208269,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,1.70219802876894,0,0,0.214337035031592,0,0,0.493647061806363,4.26250928760439,0,0,0.220528398054962,0,0,0,0,0,0,51.1773833549007,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.165306911450672,0,0,0,0,0.897099276263873,0.330916980914195,1.75006069509643,2.45403664607689,2.70329800785245,3.87278887530988,3.6457227756306,3.04092098834561,0,0,0,0,0,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,42.9211400388971,39.5879703396172,38.3839994004396,33.5113705570191,38.364621107156,43.0574521512129,35.1011700120539,27.4695933966774,29.9073989929575,23.2992140288319,0,0,0.853668028770671,0.972426868273176,0.419226325255965,1.10306105070008,2.889207461421,1.64828045791115,4.1719497246936,4.04315538822076,3.04175159868288,2.64076877940507,2.43467919421694,3.52138338226781,2.1825478203133,1.42888107384922,2.43357084484197,3.47236596834669,2.47251540481984,2.35518272215036,1.37147700954166,2.12970967391205,3.33810665926249,2.61623549938191,2.72917203204459,2.79228206042532,4.024415403201,0.526139422875686,2.58027816307137,0,2.01679530811096,3.25064791839359,3.27384834535751,2.63392630016142,1.92906610981141,5.9954538705107,2.33931608445408,3.22306581072447,4.78220830172108,3.30887128679273,1.85494268496337
|short_description=p1@Bcan
|short_description=p1@Bcan
}}
}}

Latest revision as of 19:21, 25 September 2015

Short description:p1@Bcan
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Bcan_5end
Coexpression cluster:MCL_coexpression_mm9:428
Association with transcript: 175bp_to_ENSMUST00000090971, NM_001109758, NM_007529, uc008pto.2, uc008ptp.2_5end
EntrezGene:Bcan
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Bcan

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A38.08
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B78.61
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C27.63
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.20
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.94
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.94
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C310.32
Mouse Granule cells, donor2.CNhs12357.11731-123E316.93
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C847.94
Mouse Microglia, donor2.CNhs12634.11736-123E8115.65
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.42
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1102.26
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D583.05
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.20
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D336.34
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F338.69
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D735.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.86
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E451.37
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E537.71
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I646.45
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D663.05
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F659.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I31.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B217.27
cerebellum, neonate N30.CNhs11135.1395-42I220.53
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A453.77
corpus striatum, adult.CNhs10487.19-21D843.92
corpus striatum, neonate N00.CNhs11226.630-43F123.75
cortex, adult.CNhs10473.12-14D533.37
cortex, neonate N30.CNhs11107.1392-42F239.38
diencephalon, adult.CNhs10482.20-12F244.26
diencephalon, neonate N30.CNhs11201.1388-42B257.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.38
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E846.47
hippocampus, neonate N00.CNhs11228.627-43G117.29
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C244.95
medulla oblongata, neonate N30.CNhs11200.1396-42A360.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I941.77
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C951.18
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G51.75
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G52.70
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I43.65
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A142.92
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A239.59
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A338.38
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A438.36
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A543.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A635.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A727.47
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A829.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.30
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.43
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.47
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.02
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.27
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.63
whole body, embryo E17.5.CNhs10513.490-9F91.93
whole body, embryo E17.CNhs10517.475-3I56.00
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C64.78
whole body, neonate N06.CNhs10515.692-21D13.31
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.48e-1923
neuroblast (sensu Vertebrata)9.48e-1923
neural cell2.14e-1643
ectodermal cell9.11e-1644
neurectodermal cell9.11e-1644
neuron1.86e-1233
neuronal stem cell1.86e-1233
neuroblast1.86e-1233
electrically signaling cell1.86e-1233
electrically responsive cell2.66e-0939
electrically active cell2.66e-0939

Uber anatomy
Ontology termp-valuen
central nervous system3.90e-3773
nervous system1.42e-3575
regional part of nervous system1.02e-3454
neural tube7.25e-3352
neural rod7.25e-3352
future spinal cord7.25e-3352
neural keel7.25e-3352
gray matter3.37e-2834
brain2.67e-2747
future brain2.67e-2747
regional part of brain2.63e-2646
ectoderm-derived structure1.40e-2495
ectoderm1.40e-2495
presumptive ectoderm1.40e-2495
neurectoderm1.52e-2464
neural plate1.52e-2464
presumptive neural plate1.52e-2464
brain grey matter9.46e-2329
regional part of telencephalon9.46e-2329
telencephalon9.46e-2329
anterior neural tube4.99e-2140
regional part of forebrain5.25e-2039
forebrain5.25e-2039
future forebrain5.25e-2039
ecto-epithelium1.89e-1973
pre-chordal neural plate7.04e-1649
cerebral cortex8.22e-1621
cerebral hemisphere8.22e-1621
pallium8.22e-1621
structure with developmental contribution from neural crest1.81e-1392
regional part of cerebral cortex3.15e-1317
posterior neural tube1.42e-1212
chordal neural plate1.42e-1212
occipital lobe3.71e-1010
visual cortex3.71e-1010
neocortex3.71e-1010
basal ganglion4.30e-088
nuclear complex of neuraxis4.30e-088
aggregate regional part of brain4.30e-088
collection of basal ganglia4.30e-088
cerebral subcortex4.30e-088
spinal cord1.13e-076
dorsal region element1.13e-076
dorsum1.13e-076
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr3:87804070..87804102,-&oldid=4209290"