FFCP PHASE1:Mm9::chr5:37633264..37633320,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12933 | |EntrezGene=12933 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |MCL_coexpression_id=87 | ||
|TSSclassifier=NA | |||
|UniProt=Q6P1J1 | |UniProt=Q6P1J1 | ||
|association_with_transcript=0bp_to_ENSMUST00000114158,NM_001136058,uc008xfl.1,uc012dvl.1_5end | |association_with_transcript=0bp_to_ENSMUST00000114158,NM_001136058,uc008xfl.1,uc012dvl.1_5end | ||
|cluster_id=chr5:37633264..37633320,+ | |||
|description=CAGE_peak_2_at_Crmp1_5end | |description=CAGE_peak_2_at_Crmp1_5end | ||
|id=chr5:37633264..37633320,+ | |id=chr5:37633264..37633320,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.72e-17!33;CL:0000047!1.72e-17!33;CL:0000031!1.72e-17!33;CL:0000404!1.72e-17!33;CL:0000117!1.06e-16!23;CL:0000337!1.06e-16!23;CL:0000221!1.48e-13!44;CL:0000133!1.48e-13!44;CL:0002319!2.27e-13!43;CL:0000393!3.53e-12!39;CL:0000211!3.53e-12!39;CL:0000055!3.94e-09!50 | |ontology_enrichment_celltype=CL:0000540!1.72e-17!33;CL:0000047!1.72e-17!33;CL:0000031!1.72e-17!33;CL:0000404!1.72e-17!33;CL:0000117!1.06e-16!23;CL:0000337!1.06e-16!23;CL:0000221!1.48e-13!44;CL:0000133!1.48e-13!44;CL:0002319!2.27e-13!43;CL:0000393!3.53e-12!39;CL:0000211!3.53e-12!39;CL:0000055!3.94e-09!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.10e-19,33;CL:0000047,1.10e-19,33;CL:0000031,1.10e-19,33;CL:0000404,1.10e-19,33;CL:0000117,8.69e-19,23;CL:0000337,8.69e-19,23;CL:0000393,1.92e-14,39;CL:0000211,1.92e-14,39;CL:0000221,4.21e-14,44;CL:0000133,4.21e-14,44;CL:0002319,6.87e-14,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.43e-29!73;UBERON:0005743!1.43e-29!73;UBERON:0000073!1.59e-29!75;UBERON:0001016!1.59e-29!75;UBERON:0002346!2.19e-29!71;UBERON:0003075!2.19e-29!71;UBERON:0007284!2.19e-29!71;UBERON:0004121!9.56e-28!102;UBERON:0000924!9.56e-28!102;UBERON:0006601!9.56e-28!102;UBERON:0000033!4.13e-24!63;UBERON:0001049!6.68e-24!52;UBERON:0005068!6.68e-24!52;UBERON:0006241!6.68e-24!52;UBERON:0007135!6.68e-24!52;UBERON:0000955!5.67e-22!50;UBERON:0006238!5.67e-22!50;UBERON:0003056!1.24e-21!49;UBERON:0002616!2.68e-21!49;UBERON:0002020!8.04e-20!34;UBERON:0003080!2.57e-18!40;UBERON:0002780!9.25e-18!39;UBERON:0001890!9.25e-18!39;UBERON:0006240!9.25e-18!39;UBERON:0002791!7.65e-16!29;UBERON:0003528!7.65e-16!29;UBERON:0001893!7.65e-16!29;UBERON:0007811!5.05e-12!86;UBERON:0000956!5.30e-11!21;UBERON:0001869!5.30e-11!21;UBERON:0000203!5.30e-11!21;UBERON:0000153!3.06e-09!94;UBERON:0002619!1.86e-08!17;UBERON:0002021!2.45e-07!10;UBERON:0000411!2.45e-07!10;UBERON:0001950!2.45e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!1.43e-29!73;UBERON:0005743!1.43e-29!73;UBERON:0000073!1.59e-29!75;UBERON:0001016!1.59e-29!75;UBERON:0002346!2.19e-29!71;UBERON:0003075!2.19e-29!71;UBERON:0007284!2.19e-29!71;UBERON:0004121!9.56e-28!102;UBERON:0000924!9.56e-28!102;UBERON:0006601!9.56e-28!102;UBERON:0000033!4.13e-24!63;UBERON:0001049!6.68e-24!52;UBERON:0005068!6.68e-24!52;UBERON:0006241!6.68e-24!52;UBERON:0007135!6.68e-24!52;UBERON:0000955!5.67e-22!50;UBERON:0006238!5.67e-22!50;UBERON:0003056!1.24e-21!49;UBERON:0002616!2.68e-21!49;UBERON:0002020!8.04e-20!34;UBERON:0003080!2.57e-18!40;UBERON:0002780!9.25e-18!39;UBERON:0001890!9.25e-18!39;UBERON:0006240!9.25e-18!39;UBERON:0002791!7.65e-16!29;UBERON:0003528!7.65e-16!29;UBERON:0001893!7.65e-16!29;UBERON:0007811!5.05e-12!86;UBERON:0000956!5.30e-11!21;UBERON:0001869!5.30e-11!21;UBERON:0000203!5.30e-11!21;UBERON:0000153!3.06e-09!94;UBERON:0002619!1.86e-08!17;UBERON:0002021!2.45e-07!10;UBERON:0000411!2.45e-07!10;UBERON:0001950!2.45e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.57e-33,73;UBERON:0002346,2.59e-32,64;UBERON:0003075,2.59e-32,64;UBERON:0007284,2.59e-32,64;UBERON:0001016,4.98e-32,75;UBERON:0004121,1.31e-29,95;UBERON:0000924,1.31e-29,95;UBERON:0006601,1.31e-29,95;UBERON:0000073,3.40e-29,54;UBERON:0001049,1.71e-27,52;UBERON:0005068,1.71e-27,52;UBERON:0006241,1.71e-27,52;UBERON:0007135,1.71e-27,52;UBERON:0010371,4.84e-27,73;UBERON:0003056,9.94e-25,49;UBERON:0000955,3.13e-23,47;UBERON:0006238,3.13e-23,47;UBERON:0002020,1.05e-22,34;UBERON:0002616,1.79e-22,46;UBERON:0010314,2.65e-21,92;UBERON:0003080,5.92e-21,40;UBERON:0002780,2.56e-20,39;UBERON:0001890,2.56e-20,39;UBERON:0006240,2.56e-20,39;UBERON:0003528,3.69e-18,29;UBERON:0002791,3.69e-18,29;UBERON:0001893,3.69e-18,29;UBERON:0000956,1.24e-12,21;UBERON:0001869,1.24e-12,21;UBERON:0000203,1.24e-12,21;UBERON:0002619,1.00e-09,17;UBERON:0002021,3.90e-08,10;UBERON:0000411,3.90e-08,10;UBERON:0001950,3.90e-08,10;UBERON:0003076,5.12e-07,12;UBERON:0003057,5.12e-07,12;UBERON:0002420,8.89e-07,8;UBERON:0007245,8.89e-07,8;UBERON:0010009,8.89e-07,8;UBERON:0010011,8.89e-07,8;UBERON:0000454,8.89e-07,8 | |||
|phase1_expression=5.92550734287738,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2022294552287,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0.139986421625363,0,0,0,0,0,0,0,149.309548114383,130.660771880192,148.316548420446,0.338844532069132,0,0,1.97773272513395,0,0.599200221036809,1.92109152660777,79.9446910898363,98.1493171671391,86.443559115418,203.097849911104,177.578306925097,85.6210686512529,82.8104869597562,94.6795350208322,27.5289702498472,47.4996897676898,36.0975353152172,182.530622218588,176.113713934639,145.334830385336,25.684835908127,29.2636557216474,25.3645091309505,184.142865921042,175.686654106093,237.659293427258,0.908714319998209,1.28471652181535,0,0,0,1.07940638327563,0,0,2.94933282276679,0,0,0,5.49289337129054,0,0,0,0,0,0,1.59857431606684,0,2.52351636410202,9.71517829890361,7.61163695780353,5.30415643688935,5.27529241934179,7.4080885495494,1.38233250462643,0,0.144599356919912,0,0,0,0,0,37.7687228144896,38.9570874673026,0,0,0,0,32.2049874720369,25.1625331550245,136.963243803022,42.4131341269155,45.5173514047988,34.0772393077679,31.9615288243483,0.101839363850316,0,0,3.36706969418358,2.86264974517948,23.2201125477808,29.3501271582719,25.921228667743,22.9283002139975,19.7295129238669,22.3010104452155,12.4177617954728,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,66.8722036433925,172.776844184819,0.330418782983798,0,1.49301775374664,3.71578674976702,2.83508414908605,2.01683524623343,2.2237804384487,1.71203063501303,0,0.823494773620054,1.75934646160189,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0,2.17072173958485,0,0.407302655690628,0.387904974335251,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.814824882210129,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,20.871576698413,24.3800308111783,0,0,4.73262329124385,7.80877488593277,7.97066571611356,2.38968797952552,3.34198011123591,4.24614796183249,8.90583543684768,6.13737301613755,13.0444966722353,59.1231222216125,0,0,0.325773918707152,0,0,0,0.302323556964751,0.377210159511796,1.77181135728464,0.922305443831782,1.03371317267288,0,0,0,0,0,18.0432991049508,4.50152735078276,2.58717367565509,1.71469628025274,1.24138163549592,5.52943334566419,9.05019613311665,9.43841342255258,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,17.8008289930089,0,0.206386867963223,0,0,0,0.228778173206523,0,0.139951452323658,0,0,4.9032079005076,3.04979200690273,2.59212817972323,1.25452977608681,1.52853794622324,0.674321731924103,0.661227645802687,0,0,0,4.50954350947352,0,0,1.16670713006429,1.16243841129958,1.01373675294467,0.58678619322877,0.13020438484395,0.314578033277133,1.20792060413003,3.16833006883652,0,0.202725215290164,0.718976700153791,0,0.716106782669926,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,75.0330135506698,69.320357126167,95.2066630184029,52.0662715025688,37.769694869485,41.1763725141402,36.9263386643861,33.9856806738153,34.6899408873719,36.6369336972144,29.1288157582753,23.2197703825622,11.4260157022098,29.9746822558015,27.0249957421521,18.6687251353357,19.3672953804561,17.0087181083662,17.9415020352296,17.4900716924265,16.4104917005886,14.0462261204824,17.6709420637439,20.2747205413315,17.1465728861907,23.0609808630262,21.2200142510076,14.835092428919,14.4254941731709,14.057639347802,14.3755402989063,19.7902037656276,19.1857269954674,19.4806417459734,20.8998081492441,22.1342847176055,17.0995312434598,18.3335553691913,14.0285567914435,21.9474783529722,25.3156519705198,16.7784727699573,19.9868525129896,10.9956768259251,53.7092742566584,18.0127338502964,14.8261027293326,10.3295699317175,3.75005412503176,1.62307484934295 | |phase1_expression=5.92550734287738,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2022294552287,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96222640742402,0,0,0.139986421625363,0,0,0,0,0,0,0,149.309548114383,130.660771880192,148.316548420446,0.338844532069132,0,0,1.97773272513395,0,0.599200221036809,1.92109152660777,79.9446910898363,98.1493171671391,86.443559115418,203.097849911104,177.578306925097,85.6210686512529,82.8104869597562,94.6795350208322,27.5289702498472,47.4996897676898,36.0975353152172,182.530622218588,176.113713934639,145.334830385336,25.684835908127,29.2636557216474,25.3645091309505,184.142865921042,175.686654106093,237.659293427258,0.908714319998209,1.28471652181535,0,0,0,1.07940638327563,0,0,2.94933282276679,0,0,0,5.49289337129054,0,0,0,0,0,0,1.59857431606684,0,2.52351636410202,9.71517829890361,7.61163695780353,5.30415643688935,5.27529241934179,7.4080885495494,1.38233250462643,0,0.144599356919912,0,0,0,0,0,37.7687228144896,38.9570874673026,0,0,0,0,32.2049874720369,25.1625331550245,136.963243803022,42.4131341269155,45.5173514047988,34.0772393077679,31.9615288243483,0.101839363850316,0,0,3.36706969418358,2.86264974517948,23.2201125477808,29.3501271582719,25.921228667743,22.9283002139975,19.7295129238669,22.3010104452155,12.4177617954728,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0.233530684734339,0,0,0,0,0.219550115291051,0,66.8722036433925,172.776844184819,0.330418782983798,0,1.49301775374664,3.71578674976702,2.83508414908605,2.01683524623343,2.2237804384487,1.71203063501303,0,0.823494773620054,1.75934646160189,0.596869416123452,0.19496408711912,0,0,0.398282546508734,0,2.17072173958485,0,0.407302655690628,0.387904974335251,0.280543279561274,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70542270593436,0.814824882210129,0.339490171550376,0.234690248288502,0.335012514883631,0,0.390267295715598,0,0,0,0,0,0,0,0,0,0,20.871576698413,24.3800308111783,0,0,4.73262329124385,7.80877488593277,7.97066571611356,2.38968797952552,3.34198011123591,4.24614796183249,8.90583543684768,6.13737301613755,13.0444966722353,59.1231222216125,0,0,0.325773918707152,0,0,0,0.302323556964751,0.377210159511796,1.77181135728464,0.922305443831782,1.03371317267288,0,0,0,0,0,18.0432991049508,4.50152735078276,2.58717367565509,1.71469628025274,1.24138163549592,5.52943334566419,9.05019613311665,9.43841342255258,0.23467170806371,0,0.220528398054962,0,0,0,0,0,0,17.8008289930089,0,0.206386867963223,0,0,0,0.228778173206523,0,0.139951452323658,0,0,4.9032079005076,3.04979200690273,2.59212817972323,1.25452977608681,1.52853794622324,0.674321731924103,0.661227645802687,0,0,0,4.50954350947352,0,0,1.16670713006429,1.16243841129958,1.01373675294467,0.58678619322877,0.13020438484395,0.314578033277133,1.20792060413003,3.16833006883652,0,0.202725215290164,0.718976700153791,0,0.716106782669926,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0,0,76.241498753304,75.0330135506698,69.320357126167,95.2066630184029,52.0662715025688,37.769694869485,41.1763725141402,36.9263386643861,33.9856806738153,34.6899408873719,36.6369336972144,29.1288157582753,23.2197703825622,11.4260157022098,29.9746822558015,27.0249957421521,18.6687251353357,19.3672953804561,17.0087181083662,17.9415020352296,17.4900716924265,16.4104917005886,14.0462261204824,17.6709420637439,20.2747205413315,17.1465728861907,23.0609808630262,21.2200142510076,14.835092428919,14.4254941731709,14.057639347802,14.3755402989063,19.7902037656276,19.1857269954674,19.4806417459734,20.8998081492441,22.1342847176055,17.0995312434598,18.3335553691913,14.0285567914435,21.9474783529722,25.3156519705198,16.7784727699573,19.9868525129896,10.9956768259251,53.7092742566584,18.0127338502964,14.8261027293326,10.3295699317175,3.75005412503176,1.62307484934295 | ||
|short_description=p2@Crmp1 | |short_description=p2@Crmp1 | ||
}} | }} |
Latest revision as of 00:24, 26 September 2015
Short description: | p2@Crmp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Crmp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000114158, NM_001136058, uc008xfl.1, uc012dvl.1_5end |
EntrezGene: | Crmp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.10e-19 | 33 |
neuronal stem cell | 1.10e-19 | 33 |
neuroblast | 1.10e-19 | 33 |
electrically signaling cell | 1.10e-19 | 33 |
CNS neuron (sensu Vertebrata) | 8.69e-19 | 23 |
neuroblast (sensu Vertebrata) | 8.69e-19 | 23 |
electrically responsive cell | 1.92e-14 | 39 |
electrically active cell | 1.92e-14 | 39 |
ectodermal cell | 4.21e-14 | 44 |
neurectodermal cell | 4.21e-14 | 44 |
neural cell | 6.87e-14 | 43 |