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FFCP PHASE1:Mm9::chr5:38550804..38550817,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=18196
|EntrezGene=18196
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q62092
|UniProt=Q62092
|association_with_transcript=-98bp_to_ENSMUST00000031009,NM_010942,uc008xga.1_5end
|association_with_transcript=-98bp_to_ENSMUST00000031009,NM_010942,uc008xga.1_5end
|cluster_id=chr5:38550804..38550817,-
|description=CAGE_peak_4_at_Nsg1_5end
|description=CAGE_peak_4_at_Nsg1_5end
|id=chr5:38550804..38550817,-
|id=chr5:38550804..38550817,-
|ontology_enrichment_celltype=CL:0000540!1.74e-17!33;CL:0000047!1.74e-17!33;CL:0000031!1.74e-17!33;CL:0000404!1.74e-17!33;CL:0000117!8.09e-17!23;CL:0000337!8.09e-17!23;CL:0002319!1.37e-16!43;CL:0000221!1.72e-16!44;CL:0000133!1.72e-16!44;CL:0000393!2.45e-15!39;CL:0000211!2.45e-15!39;CL:0000055!2.46e-14!50
|ontology_enrichment_celltype=CL:0000540!1.74e-17!33;CL:0000047!1.74e-17!33;CL:0000031!1.74e-17!33;CL:0000404!1.74e-17!33;CL:0000117!8.09e-17!23;CL:0000337!8.09e-17!23;CL:0002319!1.37e-16!43;CL:0000221!1.72e-16!44;CL:0000133!1.72e-16!44;CL:0000393!2.45e-15!39;CL:0000211!2.45e-15!39;CL:0000055!2.46e-14!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.05e-24,23;CL:0000337,1.05e-24,23;CL:0000540,2.10e-18,33;CL:0000047,2.10e-18,33;CL:0000031,2.10e-18,33;CL:0000404,2.10e-18,33;CL:0000393,3.98e-14,39;CL:0000211,3.98e-14,39;CL:0002319,5.43e-13,43;CL:0000221,1.74e-12,44;CL:0000133,1.74e-12,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.38e-34!73;UBERON:0005743!1.38e-34!73;UBERON:0000073!2.33e-34!75;UBERON:0001016!2.33e-34!75;UBERON:0002346!2.47e-30!71;UBERON:0003075!2.47e-30!71;UBERON:0007284!2.47e-30!71;UBERON:0004121!3.09e-30!102;UBERON:0000924!3.09e-30!102;UBERON:0006601!3.09e-30!102;UBERON:0001049!3.86e-28!52;UBERON:0005068!3.86e-28!52;UBERON:0006241!3.86e-28!52;UBERON:0007135!3.86e-28!52;UBERON:0000033!1.13e-26!63;UBERON:0000955!4.66e-26!50;UBERON:0006238!4.66e-26!50;UBERON:0002616!1.84e-25!49;UBERON:0003056!4.49e-22!49;UBERON:0002020!5.07e-21!34;UBERON:0003080!7.82e-20!40;UBERON:0002780!3.44e-19!39;UBERON:0001890!3.44e-19!39;UBERON:0006240!3.44e-19!39;UBERON:0002791!4.61e-17!29;UBERON:0003528!4.61e-17!29;UBERON:0001893!4.61e-17!29;UBERON:0007811!1.09e-12!86;UBERON:0000153!4.44e-12!94;UBERON:0000956!1.34e-11!21;UBERON:0001869!1.34e-11!21;UBERON:0000203!1.34e-11!21;UBERON:0002619!1.45e-09!17;UBERON:0003076!8.38e-09!12;UBERON:0003057!8.38e-09!12;UBERON:0002021!6.06e-07!10;UBERON:0000411!6.06e-07!10;UBERON:0001950!6.06e-07!10;UBERON:0002420!8.93e-07!8;UBERON:0007245!8.93e-07!8;UBERON:0010009!8.93e-07!8;UBERON:0010011!8.93e-07!8;UBERON:0000454!8.93e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.68e-34,54;UBERON:0002346,1.50e-32,64;UBERON:0003075,1.50e-32,64;UBERON:0007284,1.50e-32,64;UBERON:0001017,1.62e-32,73;UBERON:0001049,5.67e-32,52;UBERON:0005068,5.67e-32,52;UBERON:0006241,5.67e-32,52;UBERON:0007135,5.67e-32,52;UBERON:0001016,3.77e-31,75;UBERON:0002020,4.47e-29,34;UBERON:0004121,2.90e-27,95;UBERON:0000924,2.90e-27,95;UBERON:0006601,2.90e-27,95;UBERON:0010371,2.23e-26,73;UBERON:0000955,5.54e-26,47;UBERON:0006238,5.54e-26,47;UBERON:0002616,3.79e-25,46;UBERON:0003528,3.83e-23,29;UBERON:0002791,3.83e-23,29;UBERON:0001893,3.83e-23,29;UBERON:0003056,1.38e-22,49;UBERON:0003080,4.19e-21,40;UBERON:0002780,3.35e-20,39;UBERON:0001890,3.35e-20,39;UBERON:0006240,3.35e-20,39;UBERON:0010314,1.93e-17,92;UBERON:0000956,5.52e-15,21;UBERON:0001869,5.52e-15,21;UBERON:0000203,5.52e-15,21;UBERON:0002619,6.18e-12,17;UBERON:0003076,1.89e-11,12;UBERON:0003057,1.89e-11,12;UBERON:0002021,9.89e-10,10;UBERON:0000411,9.89e-10,10;UBERON:0001950,9.89e-10,10;UBERON:0002420,1.78e-09,8;UBERON:0007245,1.78e-09,8;UBERON:0010009,1.78e-09,8;UBERON:0010011,1.78e-09,8;UBERON:0000454,1.78e-09,8;UBERON:0002240,4.08e-08,6;UBERON:0005174,4.08e-08,6;UBERON:0001137,4.08e-08,6;UBERON:0001948,3.50e-07,5;UBERON:0002315,3.50e-07,5;UBERON:0000025,6.72e-07,114
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,0.550640256485045,1.56478268869608,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,15.9830004079082,17.4567023159771,17.747279298173,2.37191172448392,1.77858959222228,0.899899717281399,0,0,0.898800331555214,0.768436610643109,4.45865332926454,4.99521971827255,6.09942387919008,23.7090317055157,23.8538024227743,8.94182834269164,7.09256485534949,11.0306254393203,7.70811166995721,15.9609172606485,16.8967186581868,14.7712642257817,17.4741399280602,16.1483144872596,22.0554569211091,10.1297269805702,12.5294563176984,17.3830865429464,16.3727432918968,18.4535451367048,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.983110940922263,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.904335843315735,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,20.7874365878198,25.9713916448684,0,0,0,0,8.83764772488454,8.23501085073528,8.41884159156192,7.99591872884472,7.67146371990992,9.3504620051802,7.13861557498134,0.407357455401265,0,0,0.210441855886474,0.260240885925407,2.5289231487682,2.88099407688559,1.20563854268572,1.7009124787832,1.40925092313335,2.43624483855295,0.517406741478031,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,8.41159794256509,10.3933658503077,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0.387904974335251,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,11.3990918891332,11.9555920324047,0.327869890753351,0,1.57754109708128,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,0.566153061577665,1.61924280669958,1.16902343164525,0.395287777946524,6.42642632843614,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,1.4229455216103,0.428674070063185,0.354680467284547,1.24858172321449,0.987294123612726,0.913394847343798,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0,10.5692422145991,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,4.50954350947352,0.299033092087958,0,0,0.129159823477731,0,0,0.651021924219751,0.104859344425711,1.69108884578204,2.30424005006292,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,8.74617949363636,10.8850147553485,14.0919609521824,4.7955776383945,7.55393897389701,6.75022500231806,6.30449684513909,4.53142408984205,6.73088405277366,1.14166082342594,1.19707462020309,1.87806966329548,1.21553358534147,1.46729213839588,2.20612210140017,1.33348036680969,1.03017528619447,0.962757628775446,2.27427490587418,1.52087579934144,0.943131706930381,1.31098110457835,1.47257850531199,1.09127391015665,0.952587382566147,1.62238056322798,1.35036454324594,1.23625770240992,1.47198920134397,1.71434626192708,1.06485483695602,1.1921809497366,0.872078499793971,2.07040636913727,1.09998990259179,0.914639864363863,1.31534855718921,0.950628796921032,0.561142271657738,1.18635018124174,1.0835493061312,2.45538625901814,1.39443157067369,0.578719832943424,2.99772693525535,1.40358965067245,1.50409737833809,0.765153328275374,0,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46625541438102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0.608261587317087,0.550640256485045,1.56478268869608,0.436050312760893,0.659058548203415,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,15.9830004079082,17.4567023159771,17.747279298173,2.37191172448392,1.77858959222228,0.899899717281399,0,0,0.898800331555214,0.768436610643109,4.45865332926454,4.99521971827255,6.09942387919008,23.7090317055157,23.8538024227743,8.94182834269164,7.09256485534949,11.0306254393203,7.70811166995721,15.9609172606485,16.8967186581868,14.7712642257817,17.4741399280602,16.1483144872596,22.0554569211091,10.1297269805702,12.5294563176984,17.3830865429464,16.3727432918968,18.4535451367048,0.227178579999552,0.302286240427142,0.289864488701678,0,0,0,0,0,0.983110940922263,0.170430322578058,1.03914401841148,0.35333957451034,0.281686839553361,0,0,0,0,0,0,0,0,0.148442139064825,0.520455980298408,0,0.461230994512117,0.904335843315735,0.705532242814229,0.376999773989026,0,0,0,0,0,0,0,20.7874365878198,25.9713916448684,0,0,0,0,8.83764772488454,8.23501085073528,8.41884159156192,7.99591872884472,7.67146371990992,9.3504620051802,7.13861557498134,0.407357455401265,0,0,0.210441855886474,0.260240885925407,2.5289231487682,2.88099407688559,1.20563854268572,1.7009124787832,1.40925092313335,2.43624483855295,0.517406741478031,0.862271971731369,0.567318240503458,0.527853372491847,0.43839146485515,0.278047249225598,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,8.41159794256509,10.3933658503077,0,0,0.426576501070468,0.464473343720877,0.128867461322093,0.605050573870028,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0.569003702859245,0.228497025219458,0,0,0.387904974335251,0,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0.339490171550376,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0.159454768657487,0,0.172684981865896,0,0,0,0,0,11.3990918891332,11.9555920324047,0.327869890753351,0,1.57754109708128,0.390438744296638,0.646270193198397,0.716906393857656,0.445597348164788,0.566153061577665,1.61924280669958,1.16902343164525,0.395287777946524,6.42642632843614,0,0.35613120733451,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0.720244376125241,1.4229455216103,0.428674070063185,0.354680467284547,1.24858172321449,0.987294123612726,0.913394847343798,0,0,0,0,0,0.180938774784468,0.119372344003136,0,0,10.5692422145991,0,0,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0.218362563746178,0,0.165306911450672,0,0.129614973291793,0,4.50954350947352,0.299033092087958,0,0,0.129159823477731,0,0,0.651021924219751,0.104859344425711,1.69108884578204,2.30424005006292,0,0,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,8.74617949363636,10.8850147553485,14.0919609521824,4.7955776383945,7.55393897389701,6.75022500231806,6.30449684513909,4.53142408984205,6.73088405277366,1.14166082342594,1.19707462020309,1.87806966329548,1.21553358534147,1.46729213839588,2.20612210140017,1.33348036680969,1.03017528619447,0.962757628775446,2.27427490587418,1.52087579934144,0.943131706930381,1.31098110457835,1.47257850531199,1.09127391015665,0.952587382566147,1.62238056322798,1.35036454324594,1.23625770240992,1.47198920134397,1.71434626192708,1.06485483695602,1.1921809497366,0.872078499793971,2.07040636913727,1.09998990259179,0.914639864363863,1.31534855718921,0.950628796921032,0.561142271657738,1.18635018124174,1.0835493061312,2.45538625901814,1.39443157067369,0.578719832943424,2.99772693525535,1.40358965067245,1.50409737833809,0.765153328275374,0,0.231867835620421
|short_description=p4@Nsg1
|short_description=p4@Nsg1
}}
}}

Latest revision as of 00:36, 26 September 2015

Short description:p4@Nsg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nsg1_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: -98bp_to_ENSMUST00000031009, NM_010942, uc008xga.1_5end
EntrezGene:Nsg1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nsg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.47
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.61
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C315.98
Mouse Granule cells, donor2.CNhs12357.11731-123E317.46
Mouse Granule cells, donor3.CNhs12108.11636-122C717.75
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.85
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.09
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D611.03
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.96
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D716.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F417.47
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.15
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E422.06
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.53
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.38
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.37
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E118.45
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.98
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B220.79
cerebellum, neonate N30.CNhs11135.1395-42I225.97
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.84
corpus striatum, adult.CNhs10487.19-21D88.24
corpus striatum, neonate N00.CNhs11226.630-43F18.42
cortex, adult.CNhs10473.12-14D58.00
cortex, neonate N30.CNhs11107.1392-42F27.67
diencephalon, adult.CNhs10482.20-12F29.35
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.41
eyeball, neonate N02.CNhs11205.1551-44G82.44
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E88.41
hippocampus, neonate N00.CNhs11228.627-43G110.39
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C211.40
medulla oblongata, neonate N30.CNhs11200.1396-42A311.96
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I96.43
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C910.57
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E22.30
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D714.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.30
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.08
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I53.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.05e-2423
neuroblast (sensu Vertebrata)1.05e-2423
neuron2.10e-1833
neuronal stem cell2.10e-1833
neuroblast2.10e-1833
electrically signaling cell2.10e-1833
electrically responsive cell3.98e-1439
electrically active cell3.98e-1439
neural cell5.43e-1343
ectodermal cell1.74e-1244
neurectodermal cell1.74e-1244

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.68e-3454
neurectoderm1.50e-3264
neural plate1.50e-3264
presumptive neural plate1.50e-3264
central nervous system1.62e-3273
neural tube5.67e-3252
neural rod5.67e-3252
future spinal cord5.67e-3252
neural keel5.67e-3252
nervous system3.77e-3175
gray matter4.47e-2934
ectoderm-derived structure2.90e-2795
ectoderm2.90e-2795
presumptive ectoderm2.90e-2795
ecto-epithelium2.23e-2673
brain5.54e-2647
future brain5.54e-2647
regional part of brain3.79e-2546
brain grey matter3.83e-2329
regional part of telencephalon3.83e-2329
telencephalon3.83e-2329
pre-chordal neural plate1.38e-2249
anterior neural tube4.19e-2140
regional part of forebrain3.35e-2039
forebrain3.35e-2039
future forebrain3.35e-2039
structure with developmental contribution from neural crest1.93e-1792
cerebral cortex5.52e-1521
cerebral hemisphere5.52e-1521
pallium5.52e-1521
regional part of cerebral cortex6.18e-1217
posterior neural tube1.89e-1112
chordal neural plate1.89e-1112
occipital lobe9.89e-1010
visual cortex9.89e-1010
neocortex9.89e-1010
basal ganglion1.78e-098
nuclear complex of neuraxis1.78e-098
aggregate regional part of brain1.78e-098
collection of basal ganglia1.78e-098
cerebral subcortex1.78e-098
spinal cord4.08e-086
dorsal region element4.08e-086
dorsum4.08e-086
regional part of spinal cord3.50e-075
gray matter of spinal cord3.50e-075
tube6.72e-07114
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