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FFCP PHASE1:Mm9::chr7:147080817..147080884,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr7:147080817..147080884,+
|DHSsupport=NA
|short_description=p1@Kndc1
|DPIdataset=NA
|description=CAGE_peak_1_at_Kndc1_5end
|association_with_transcript=79bp_to_ENSMUST00000121839_5end
|EntrezGene=76484
|EntrezGene=76484
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=D3Z3X0
|UniProt=D3Z3X0
|association_with_transcript=79bp_to_ENSMUST00000121839_5end
|cluster_id=chr7:147080817..147080884,+
|description=CAGE_peak_1_at_Kndc1_5end
|id=chr7:147080817..147080884,+
|ontology_enrichment_celltype=CL:0000540!4.50e-11!33;CL:0000047!4.50e-11!33;CL:0000031!4.50e-11!33;CL:0000404!4.50e-11!33;CL:0000221!6.35e-11!44;CL:0000133!6.35e-11!44;CL:0002319!6.57e-11!43;CL:0000117!1.43e-10!23;CL:0000337!1.43e-10!23;CL:0000393!6.02e-08!39;CL:0000211!6.02e-08!39;CL:0000055!8.08e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,9.38e-13,23;CL:0000337,9.38e-13,23;CL:0000540,2.93e-10,33;CL:0000047,2.93e-10,33;CL:0000031,2.93e-10,33;CL:0000404,2.93e-10,33;CL:0002319,3.71e-09,43;CL:0000221,8.55e-09,44;CL:0000133,8.55e-09,44;CL:0000393,9.30e-08,39;CL:0000211,9.30e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!1.34e-30!73;UBERON:0005743!1.34e-30!73;UBERON:0000073!6.88e-30!75;UBERON:0001016!6.88e-30!75;UBERON:0004121!1.79e-23!102;UBERON:0000924!1.79e-23!102;UBERON:0006601!1.79e-23!102;UBERON:0002346!9.21e-23!71;UBERON:0003075!9.21e-23!71;UBERON:0007284!9.21e-23!71;UBERON:0001049!1.26e-22!52;UBERON:0005068!1.26e-22!52;UBERON:0006241!1.26e-22!52;UBERON:0007135!1.26e-22!52;UBERON:0000033!1.96e-21!63;UBERON:0000955!3.24e-21!50;UBERON:0006238!3.24e-21!50;UBERON:0002616!1.26e-20!49;UBERON:0003056!2.18e-17!49;UBERON:0007811!6.11e-17!86;UBERON:0003080!5.14e-16!40;UBERON:0002780!2.75e-15!39;UBERON:0001890!2.75e-15!39;UBERON:0006240!2.75e-15!39;UBERON:0002020!1.27e-14!34;UBERON:0000153!1.10e-13!94;UBERON:0002791!2.50e-11!29;UBERON:0003528!2.50e-11!29;UBERON:0001893!2.50e-11!29;UBERON:0002619!1.23e-07!17;UBERON:0002021!1.76e-07!10;UBERON:0000411!1.76e-07!10;UBERON:0001950!1.76e-07!10;UBERON:0003076!2.44e-07!12;UBERON:0003057!2.44e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.54e-35,73;UBERON:0001016,2.31e-33,75;UBERON:0000073,8.87e-31,54;UBERON:0002346,2.08e-28,64;UBERON:0003075,2.08e-28,64;UBERON:0007284,2.08e-28,64;UBERON:0001049,2.65e-28,52;UBERON:0005068,2.65e-28,52;UBERON:0006241,2.65e-28,52;UBERON:0007135,2.65e-28,52;UBERON:0004121,2.64e-27,95;UBERON:0000924,2.64e-27,95;UBERON:0006601,2.64e-27,95;UBERON:0010371,4.51e-23,73;UBERON:0000955,1.23e-22,47;UBERON:0006238,1.23e-22,47;UBERON:0002616,8.88e-22,46;UBERON:0002020,6.48e-19,34;UBERON:0003080,1.01e-18,40;UBERON:0003056,4.27e-18,49;UBERON:0002780,1.17e-17,39;UBERON:0001890,1.17e-17,39;UBERON:0006240,1.17e-17,39;UBERON:0010314,2.41e-15,92;UBERON:0003528,6.44e-14,29;UBERON:0002791,6.44e-14,29;UBERON:0001893,6.44e-14,29;UBERON:0002021,4.85e-11,10;UBERON:0000411,4.85e-11,10;UBERON:0001950,4.85e-11,10;UBERON:0003076,2.70e-10,12;UBERON:0003057,2.70e-10,12;UBERON:0002420,1.13e-09,8;UBERON:0007245,1.13e-09,8;UBERON:0010009,1.13e-09,8;UBERON:0010011,1.13e-09,8;UBERON:0000454,1.13e-09,8;UBERON:0002240,4.31e-08,6;UBERON:0005174,4.31e-08,6;UBERON:0001137,4.31e-08,6;UBERON:0000025,5.73e-08,114;UBERON:0002619,8.40e-08,17;UBERON:0000956,6.06e-07,21;UBERON:0001869,6.06e-07,21;UBERON:0000203,6.06e-07,21;UBERON:0001948,7.78e-07,5;UBERON:0002315,7.78e-07,5
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0.839918529752175,2.87505128729943,0,0,0.336093799142464,0,0,0,5.86717736492834,6.34789175126439,4.43681982454325,0.338844532069132,0,0.449949858640699,0,0,3.29560121570245,5.76327457982332,0.103689612308478,0,0,26.8511925339575,20.3199057675484,0.857435594504678,0.670918297127655,0.919218786610021,37.4393995397922,46.7335657391787,44.2386815777981,7.25374582516066,8.59983849862651,6.77187381723788,36.0146068711781,23.6360296213306,29.4900618209243,16.4992007865254,11.6744778255264,9.87917062874093,0,0.604572480854284,0,0,0,0,0,0,1.40444420131752,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.705532242814229,0.753999547978053,0,0,0,0,0,0,0,28.6925181071316,42.0987880695045,0,0,0,0,35.9497534571574,21.5025283324754,6.03140890141749,16.1656617778817,17.1329356411321,39.8953045554355,51.5927216555469,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0.459804208866946,0.540186389416048,1.05493372485001,2.04109497453984,1.5373646434182,0.937017245597288,3.88055056108524,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,17.4540657308226,1.02904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,3.69506380333209,0,0,0.339490171550376,0,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0.491589944147214,0.863424909329478,1.15719246865209,0,0,0,0,38.3715910070823,68.4516249698466,0,0,1.57754109708128,0.780877488593277,6.67812532971677,0,0.222798674082394,0,0.809621403349789,0.876767573733936,1.18586333383957,5.78378369559253,1.70328102249922,0.178065603667255,0,3.46437258242324,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,10.2131881726136,0.18006109403131,0.646793418913773,0.643011105094777,1.41872186913819,2.49716344642899,1.81003922662333,3.95804433848979,0,0,0,0,0,0.120625849856312,0,0,0,45.6146242945854,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0.966336483304024,1.15212002503146,0.948033361884535,0,0.410843828659309,0.51968329191118,0.537080087002444,0.79472541912506,0.721172697119813,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.38983152295901,0.865906574762965,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,8.28585425712918,9.73922372846974,7.04598047609119,11.6464028361009,7.55393897389701,8.10027000278167,16.6618845192962,9.5159905886683,13.4617681055473,0.207574695168353,0,1.02440163452481,0.729320151204882,1.04806581313991,2.02227859295016,0.666740183404846,2.26638562962784,0.64183841918363,1.01078884705519,0.760437899670719,1.50901073108861,1.12369808963859,1.08842759088278,1.14870937911227,0.476293691283074,1.50649623728312,2.12200142510076,2.47251540481984,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,1.59985946706062,1.94613598150856,0.914639864363863,0.789209134313529,0.679020569229309,2.24456908663095,1.30498519936592,1.47756723563345,2.04615521584845,2.01417893541756,1.35034627686799,2.74791635731741,2.33931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.927471342481686
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,6.20816018102809,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0,0.839918529752175,2.87505128729943,0,0,0.336093799142464,0,0,0,5.86717736492834,6.34789175126439,4.43681982454325,0.338844532069132,0,0.449949858640699,0,0,3.29560121570245,5.76327457982332,0.103689612308478,0,0,26.8511925339575,20.3199057675484,0.857435594504678,0.670918297127655,0.919218786610021,37.4393995397922,46.7335657391787,44.2386815777981,7.25374582516066,8.59983849862651,6.77187381723788,36.0146068711781,23.6360296213306,29.4900618209243,16.4992007865254,11.6744778255264,9.87917062874093,0,0.604572480854284,0,0,0,0,0,0,1.40444420131752,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0.230615497256059,0,0.705532242814229,0.753999547978053,0,0,0,0,0,0,0,28.6925181071316,42.0987880695045,0,0,0,0,35.9497534571574,21.5025283324754,6.03140890141749,16.1656617778817,17.1329356411321,39.8953045554355,51.5927216555469,0.101839363850316,0.248813941220186,0.252722758433675,0.420883711772948,0,0.459804208866946,0.540186389416048,1.05493372485001,2.04109497453984,1.5373646434182,0.937017245597288,3.88055056108524,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,17.4540657308226,1.02904612379284,0,0,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,3.69506380333209,0,0,0.339490171550376,0,0.502518772325447,0.952174563544055,0.780534591431195,0.788175720530955,0.664394068946325,0.797273843287435,0.491589944147214,0.863424909329478,1.15719246865209,0,0,0,0,38.3715910070823,68.4516249698466,0,0,1.57754109708128,0.780877488593277,6.67812532971677,0,0.222798674082394,0,0.809621403349789,0.876767573733936,1.18586333383957,5.78378369559253,1.70328102249922,0.178065603667255,0,3.46437258242324,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,10.2131881726136,0.18006109403131,0.646793418913773,0.643011105094777,1.41872186913819,2.49716344642899,1.81003922662333,3.95804433848979,0,0,0,0,0,0.120625849856312,0,0,0,45.6146242945854,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0.56369293868419,0,0,0,0,0,0,0.13020438484395,0,0.966336483304024,1.15212002503146,0.948033361884535,0,0.410843828659309,0.51968329191118,0.537080087002444,0.79472541912506,0.721172697119813,0.443068581523732,0.403865799792591,0.228620419965,0.100826185136841,0.38983152295901,0.865906574762965,0.350630706544707,0,0,0,0,0,0,0.183151624267265,0,0,5.0827665835536,8.28585425712918,9.73922372846974,7.04598047609119,11.6464028361009,7.55393897389701,8.10027000278167,16.6618845192962,9.5159905886683,13.4617681055473,0.207574695168353,0,1.02440163452481,0.729320151204882,1.04806581313991,2.02227859295016,0.666740183404846,2.26638562962784,0.64183841918363,1.01078884705519,0.760437899670719,1.50901073108861,1.12369808963859,1.08842759088278,1.14870937911227,0.476293691283074,1.50649623728312,2.12200142510076,2.47251540481984,0.588795680537589,0.685738504770831,0.532427418478012,0.715308569841963,0.581385666529314,1.59985946706062,1.94613598150856,0.914639864363863,0.789209134313529,0.679020569229309,2.24456908663095,1.30498519936592,1.47756723563345,2.04615521584845,2.01417893541756,1.35034627686799,2.74791635731741,2.33931608445408,0.644613162144895,0.382576664137687,0.220591419119515,0.927471342481686
|short_description=p1@Kndc1
}}
}}

Latest revision as of 02:30, 26 September 2015

Short description:p1@Kndc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Kndc1_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 79bp_to_ENSMUST00000121839_5end
EntrezGene:Kndc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Kndc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A36.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.87
Mouse Granule cells, donor2.CNhs12357.11731-123E36.35
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F126.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D520.32
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.86
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D337.44
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F346.73
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D744.24
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.25
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E436.01
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E523.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I629.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.50
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.40
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B228.69
cerebellum, neonate N30.CNhs11135.1395-42I242.10
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A435.95
corpus striatum, adult.CNhs10487.19-21D821.50
corpus striatum, neonate N00.CNhs11226.630-43F16.03
cortex, adult.CNhs10473.12-14D516.17
cortex, neonate N30.CNhs11107.1392-42F217.13
diencephalon, adult.CNhs10482.20-12F239.90
diencephalon, neonate N30.CNhs11201.1388-42B251.59
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E817.45
hippocampus, neonate N00.CNhs11228.627-43G11.03
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B13.70
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C238.37
medulla oblongata, neonate N30.CNhs11200.1396-42A368.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.58
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.68
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G810.21
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.81
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C945.61
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.72
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.23
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A15.08
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.05
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A57.55
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.10
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A913.46
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F22.02
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.15
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.01
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.38e-1323
neuroblast (sensu Vertebrata)9.38e-1323
neuron2.93e-1033
neuronal stem cell2.93e-1033
neuroblast2.93e-1033
electrically signaling cell2.93e-1033
neural cell3.71e-0943
ectodermal cell8.55e-0944
neurectodermal cell8.55e-0944
electrically responsive cell9.30e-0839
electrically active cell9.30e-0839

Uber anatomy
Ontology termp-valuen
central nervous system9.54e-3573
nervous system2.31e-3375
regional part of nervous system8.87e-3154
neurectoderm2.08e-2864
neural plate2.08e-2864
presumptive neural plate2.08e-2864
neural tube2.65e-2852
neural rod2.65e-2852
future spinal cord2.65e-2852
neural keel2.65e-2852
ectoderm-derived structure2.64e-2795
ectoderm2.64e-2795
presumptive ectoderm2.64e-2795
ecto-epithelium4.51e-2373
brain1.23e-2247
future brain1.23e-2247
regional part of brain8.88e-2246
gray matter6.48e-1934
anterior neural tube1.01e-1840
pre-chordal neural plate4.27e-1849
regional part of forebrain1.17e-1739
forebrain1.17e-1739
future forebrain1.17e-1739
structure with developmental contribution from neural crest2.41e-1592
brain grey matter6.44e-1429
regional part of telencephalon6.44e-1429
telencephalon6.44e-1429
occipital lobe4.85e-1110
visual cortex4.85e-1110
neocortex4.85e-1110
posterior neural tube2.70e-1012
chordal neural plate2.70e-1012
basal ganglion1.13e-098
nuclear complex of neuraxis1.13e-098
aggregate regional part of brain1.13e-098
collection of basal ganglia1.13e-098
cerebral subcortex1.13e-098
spinal cord4.31e-086
dorsal region element4.31e-086
dorsum4.31e-086
tube5.73e-08114
regional part of cerebral cortex8.40e-0817
cerebral cortex6.06e-0721
cerebral hemisphere6.06e-0721
pallium6.06e-0721
regional part of spinal cord7.78e-075
gray matter of spinal cord7.78e-075
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