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FFCP PHASE1:Mm9::chr6:103460920..103460944,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12661
|EntrezGene=12661
|HGNC=
|HGNC=
|MCL_coexpression_id=1203
|TSSclassifier=NA
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|UniProt=E9QMU6,A2RRK1,E9QL95,P70232
|association_with_transcript=50bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|association_with_transcript=50bp_to_ENSMUST00000032163,ENSMUST00000066905,ENSMUST00000089225,NM_007697,uc009dcj.1,uc009dck.1_5end
|cluster_id=chr6:103460920..103460944,+
|description=CAGE_peak_4_at_Chl1_5end
|description=CAGE_peak_4_at_Chl1_5end
|id=chr6:103460920..103460944,+
|id=chr6:103460920..103460944,+
|ontology_enrichment_celltype=CL:0000540!2.70e-21!33;CL:0000047!2.70e-21!33;CL:0000031!2.70e-21!33;CL:0000404!2.70e-21!33;CL:0000221!2.02e-18!44;CL:0000133!2.02e-18!44;CL:0002319!2.34e-18!43;CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000117!9.02e-15!23;CL:0000337!9.02e-15!23;CL:0000055!8.32e-13!50;CL:0000107!1.30e-07!9
|ontology_enrichment_celltype=CL:0000540!2.70e-21!33;CL:0000047!2.70e-21!33;CL:0000031!2.70e-21!33;CL:0000404!2.70e-21!33;CL:0000221!2.02e-18!44;CL:0000133!2.02e-18!44;CL:0002319!2.34e-18!43;CL:0000393!6.08e-15!39;CL:0000211!6.08e-15!39;CL:0000117!9.02e-15!23;CL:0000337!9.02e-15!23;CL:0000055!8.32e-13!50;CL:0000107!1.30e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000540,9.60e-27,33;CL:0000047,9.60e-27,33;CL:0000031,9.60e-27,33;CL:0000404,9.60e-27,33;CL:0000221,5.47e-21,44;CL:0000133,5.47e-21,44;CL:0002319,6.84e-21,43;CL:0000393,2.35e-20,39;CL:0000211,2.35e-20,39;CL:0000117,2.07e-18,23;CL:0000337,2.07e-18,23;CL:0000107,2.79e-09,9;CL:0002321,5.35e-08,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.23e-31!75;UBERON:0001016!1.23e-31!75;UBERON:0001017!8.56e-31!73;UBERON:0005743!8.56e-31!73;UBERON:0004121!8.35e-27!102;UBERON:0000924!8.35e-27!102;UBERON:0006601!8.35e-27!102;UBERON:0001049!3.18e-20!52;UBERON:0005068!3.18e-20!52;UBERON:0006241!3.18e-20!52;UBERON:0007135!3.18e-20!52;UBERON:0002020!2.81e-19!34;UBERON:0002346!5.39e-19!71;UBERON:0003075!5.39e-19!71;UBERON:0007284!5.39e-19!71;UBERON:0000955!4.25e-18!50;UBERON:0006238!4.25e-18!50;UBERON:0002616!7.22e-18!49;UBERON:0000033!6.78e-17!63;UBERON:0003080!8.75e-16!40;UBERON:0002791!9.70e-16!29;UBERON:0003528!9.70e-16!29;UBERON:0001893!9.70e-16!29;UBERON:0002780!3.01e-15!39;UBERON:0001890!3.01e-15!39;UBERON:0006240!3.01e-15!39;UBERON:0003056!1.90e-14!49;UBERON:0007811!4.14e-13!86;UBERON:0000153!4.56e-12!94;UBERON:0000956!7.33e-11!21;UBERON:0001869!7.33e-11!21;UBERON:0000203!7.33e-11!21;UBERON:0002619!9.11e-09!17;UBERON:0000010!4.46e-08!11;UBERON:0002410!1.30e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.36e-34,75;UBERON:0001017,5.52e-34,73;UBERON:0004121,8.75e-27,95;UBERON:0000924,8.75e-27,95;UBERON:0006601,8.75e-27,95;UBERON:0000073,1.33e-22,54;UBERON:0002020,2.37e-22,34;UBERON:0001049,3.39e-21,52;UBERON:0005068,3.39e-21,52;UBERON:0006241,3.39e-21,52;UBERON:0007135,3.39e-21,52;UBERON:0002346,3.23e-19,64;UBERON:0003075,3.23e-19,64;UBERON:0007284,3.23e-19,64;UBERON:0003528,6.59e-18,29;UBERON:0002791,6.59e-18,29;UBERON:0001893,6.59e-18,29;UBERON:0010371,1.51e-17,73;UBERON:0000955,1.05e-16,47;UBERON:0006238,1.05e-16,47;UBERON:0002616,2.06e-16,46;UBERON:0003080,3.61e-15,40;UBERON:0002780,1.58e-14,39;UBERON:0001890,1.58e-14,39;UBERON:0006240,1.58e-14,39;UBERON:0000956,8.48e-12,21;UBERON:0001869,8.48e-12,21;UBERON:0000203,8.48e-12,21;UBERON:0003056,1.87e-11,49;UBERON:0010314,2.61e-10,92;UBERON:0002410,2.79e-09,9;UBERON:0002619,3.50e-09,17;UBERON:0000010,6.76e-09,11;UBERON:0002021,6.00e-08,10;UBERON:0000411,6.00e-08,10;UBERON:0001950,6.00e-08,10;UBERON:0002420,1.78e-07,8;UBERON:0007245,1.78e-07,8;UBERON:0010009,1.78e-07,8;UBERON:0010011,1.78e-07,8;UBERON:0000454,1.78e-07,8;UBERON:0011216,8.44e-07,194;UBERON:0003076,8.50e-07,12;UBERON:0003057,8.50e-07,12
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,9.3065571995415,13.7537654610729,13.9442908771359,0.338844532069132,0,0,0,0,2.39680088414724,1.53687322128622,10.4726508431562,4.18518408828241,5.67877395648731,8.85518051651791,10.1599528837742,7.34944795289724,4.02550978276593,4.5960939330501,8.8092704799511,6.51205424234457,4.91540906419979,13.0567424852892,16.1018252740241,15.6274011167028,6.97957497503452,8.4414391504752,8.40390362772456,22.3917724959987,18.6506901846825,11.9295645328192,0.681535739998656,18.0616028655217,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.60289056221049,1.52865319276416,0.251333182659351,0,0,0,0,0,0,0,12.5895742714965,9.21565509979202,0,0,0,0,6.89036941262184,4.57500602818627,11.8115090986093,10.081810571152,4.34716277461562,7.06479351502504,5.67844420737152,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,1.29269348387523,1.15302348256365,0.281105173679186,0.517406741478031,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,6.9395683026162,22.8448239482011,0,0.528901133327089,0.213288250535234,1.16118335930219,1.03093969057675,0.80673409849337,0.889512175379481,0.570676878337677,0,2.47048432086016,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,5.13761887960934,3.98519734413491,0,0,8.83423014365519,7.02789739733949,13.1408272617007,20.0733790280144,20.0518806674155,32.5538010407157,14.9779959619711,15.1973046113882,18.1832377855401,2.24924921495265,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.388076051348264,1.28602221018955,0.709360934569094,0.713475270408282,1.48094118541909,0,0.23467170806371,0,0.661585194164886,2.4732937941222,1.61464426695906,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,2.03319467126849,1.08005340821801,2.50905955217362,1.31017538247707,1.34864346384821,1.48776220305605,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,1.44234539423963,1.47689527174577,1.41353029927407,0.914481679859998,1.61321896218945,2.92373642219257,2.21287235772758,2.68816875017609,3.62768613784338,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,3.42989406526505,0,8.471277639256,8.28585425712918,7.44764167471216,6.53042092906013,4.7955776383945,9.82012066606611,6.07520250208625,4.95353323546643,7.70342095273148,5.69536342927002,0.207574695168353,1.99512436700516,3.24393850932855,2.67417388775123,3.98265008993166,2.75765262675021,3.33370091702423,2.67845574410562,1.92551525755089,2.52697211763797,3.8021894983536,2.64076877940507,3.183811253976,3.52138338226781,4.19278923375977,3.33405583898152,4.75125736373908,3.6652751888104,2.88460130562315,4.85756436443511,1.71434626192708,3.01708870470874,3.57654284920981,3.92435324907287,4.6113596403512,3.21535509988371,3.10977553883713,4.73525480588117,4.07412341537585,3.36685362994643,3.6776855618494,4.0386837773981,3.6830793885272,3.87342102964915,3.85813221962283,6.24526444844865,2.57324769289949,4.29742108096597,1.3390183244819,0.882365676478062,0.927471342481686
|phase1_expression=1.44133962394315,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,9.3065571995415,13.7537654610729,13.9442908771359,0.338844532069132,0,0,0,0,2.39680088414724,1.53687322128622,10.4726508431562,4.18518408828241,5.67877395648731,8.85518051651791,10.1599528837742,7.34944795289724,4.02550978276593,4.5960939330501,8.8092704799511,6.51205424234457,4.91540906419979,13.0567424852892,16.1018252740241,15.6274011167028,6.97957497503452,8.4414391504752,8.40390362772456,22.3917724959987,18.6506901846825,11.9295645328192,0.681535739998656,18.0616028655217,0,0,0,0,0,0,0.702222100658759,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0.517875767294343,0.148442139064825,0,0,0.230615497256059,0.60289056221049,1.52865319276416,0.251333182659351,0,0,0,0,0,0,0,12.5895742714965,9.21565509979202,0,0,0,0,6.89036941262184,4.57500602818627,11.8115090986093,10.081810571152,4.34716277461562,7.06479351502504,5.67844420737152,0.101839363850316,0.124406970610093,0,0.841767423545896,0,0.229902104433473,0.360124259610698,0.30140963567143,1.29269348387523,1.15302348256365,0.281105173679186,0.517406741478031,0,0,0.527853372491847,0,0.556094498451196,0.348252166522167,1.23469281844766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0.162137619091711,0.292399974850665,0,0,6.9395683026162,22.8448239482011,0,0.528901133327089,0.213288250535234,1.16118335930219,1.03093969057675,0.80673409849337,0.889512175379481,0.570676878337677,0,2.47048432086016,1.00534083520108,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.597423819763102,0,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,5.13761887960934,3.98519734413491,0,0,8.83423014365519,7.02789739733949,13.1408272617007,20.0733790280144,20.0518806674155,32.5538010407157,14.9779959619711,15.1973046113882,18.1832377855401,2.24924921495265,0,0,0.162886959353576,0.164970122972535,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.516856586336442,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.388076051348264,1.28602221018955,0.709360934569094,0.713475270408282,1.48094118541909,0,0.23467170806371,0,0.661585194164886,2.4732937941222,1.61464426695906,0.965006798850494,0.477489376012546,0.328281799490123,0.291480836629851,6.48988557036784,0,0,0,0,0,0,0,0.139951452323658,0.276399947608848,0.954670618015114,0.316335993581135,2.03319467126849,1.08005340821801,2.50905955217362,1.31017538247707,1.34864346384821,1.48776220305605,1.04702376793612,0.259229946583586,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,1.58005560314089,0,0.102710957164827,0.129920822977795,0.179026695667481,0.596044064343795,1.44234539423963,1.47689527174577,1.41353029927407,0.914481679859998,1.61321896218945,2.92373642219257,2.21287235772758,2.68816875017609,3.62768613784338,0,0,0,0.965947970160952,0.187682475451182,0.183151624267265,3.42989406526505,0,8.471277639256,8.28585425712918,7.44764167471216,6.53042092906013,4.7955776383945,9.82012066606611,6.07520250208625,4.95353323546643,7.70342095273148,5.69536342927002,0.207574695168353,1.99512436700516,3.24393850932855,2.67417388775123,3.98265008993166,2.75765262675021,3.33370091702423,2.67845574410562,1.92551525755089,2.52697211763797,3.8021894983536,2.64076877940507,3.183811253976,3.52138338226781,4.19278923375977,3.33405583898152,4.75125736373908,3.6652751888104,2.88460130562315,4.85756436443511,1.71434626192708,3.01708870470874,3.57654284920981,3.92435324907287,4.6113596403512,3.21535509988371,3.10977553883713,4.73525480588117,4.07412341537585,3.36685362994643,3.6776855618494,4.0386837773981,3.6830793885272,3.87342102964915,3.85813221962283,6.24526444844865,2.57324769289949,4.29742108096597,1.3390183244819,0.882365676478062,0.927471342481686
|short_description=p4@Chl1
|short_description=p4@Chl1
}}
}}

Latest revision as of 10:27, 26 September 2015

Short description:p4@Chl1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Chl1_5end
Coexpression cluster:MCL_coexpression_mm9:1203
Association with transcript: 50bp_to_ENSMUST00000032163, ENSMUST00000066905, ENSMUST00000089225, NM_007697, uc009dcj.1, uc009dck.1_5end
EntrezGene:Chl1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Chl1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.44
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C39.31
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C713.94
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.47
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.16
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.03
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.51
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F416.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D815.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E58.44
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.40
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D622.39
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.65
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E111.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F918.06
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B212.59
cerebellum, neonate N30.CNhs11135.1395-42I29.22
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F111.81
cortex, adult.CNhs10473.12-14D510.08
cortex, neonate N30.CNhs11107.1392-42F24.35
diencephalon, adult.CNhs10482.20-12F27.06
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C61.29
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E86.94
hippocampus, neonate N00.CNhs11228.627-43G122.84
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D81.03
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.83
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.03
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D720.07
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.05
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D932.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D414.98
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D515.20
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.18
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.97
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C96.49
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.08
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A91.49
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D30.91
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G72.21
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.29
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.53
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.80
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A95.70
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B13.98
whole body, embryo E16.CNhs10514.453-14F22.76
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.64
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.52
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.75
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.58
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.61
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.22
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.87
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I56.25
whole body, embryo E18.CNhs10516.493-3B32.57
whole body, neonate N00.CNhs10525.657-19C24.30
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system3.36e-3475
central nervous system5.52e-3473
ectoderm-derived structure8.75e-2795
ectoderm8.75e-2795
presumptive ectoderm8.75e-2795
regional part of nervous system1.33e-2254
gray matter2.37e-2234
neural tube3.39e-2152
neural rod3.39e-2152
future spinal cord3.39e-2152
neural keel3.39e-2152
neurectoderm3.23e-1964
neural plate3.23e-1964
presumptive neural plate3.23e-1964
brain grey matter6.59e-1829
regional part of telencephalon6.59e-1829
telencephalon6.59e-1829
ecto-epithelium1.51e-1773
brain1.05e-1647
future brain1.05e-1647
regional part of brain2.06e-1646
anterior neural tube3.61e-1540
regional part of forebrain1.58e-1439
forebrain1.58e-1439
future forebrain1.58e-1439
cerebral cortex8.48e-1221
cerebral hemisphere8.48e-1221
pallium8.48e-1221
pre-chordal neural plate1.87e-1149
structure with developmental contribution from neural crest2.61e-1092
autonomic nervous system2.79e-099
regional part of cerebral cortex3.50e-0917
peripheral nervous system6.76e-0911
occipital lobe6.00e-0810
visual cortex6.00e-0810
neocortex6.00e-0810
basal ganglion1.78e-078
nuclear complex of neuraxis1.78e-078
aggregate regional part of brain1.78e-078
collection of basal ganglia1.78e-078
cerebral subcortex1.78e-078
organ system subdivision8.44e-07194
posterior neural tube8.50e-0712
chordal neural plate8.50e-0712
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