FFCP PHASE1:Mm9::chr1:137271496..137271510,-: Difference between revisions
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{{FFCP|EntrezGene=77552|HGNC=|MCL_coexpression_id=303|UniProt=|association_with_transcript=143bp_to_ENSMUST00000159181_5end|description=CAGE_peak_4_at_Shisa4_5end|id=chr1:137271496..137271510,-|ontology_enrichment_celltype=CL:0000221!3.87e-14!44;CL:0000133!3.87e-14!44;CL:0002319!5.78e-14!43;CL:0000055!5.85e-14!50;CL:0000393!1.89e-09!39;CL:0000211!1.89e-09!39;CL:0000540!1.07e-08!33;CL:0000047!1.07e-08!33;CL:0000031!1.07e-08!33;CL:0000404!1.07e-08!33;CL:0002321!2.48e-07!70;CL:0000220!2.48e-07!70;CL:0000333!6.38e-07!10;CL:0000095!6.38e-07!10;CL:0000243!6.38e-07!10;CL:0000123!6.38e-07!10;CL:0000125!6.38e-07!10;CL:0000030!6.38e-07!10;CL:0000339!6.38e-07!10;CL:0000117!7.97e-07!23;CL:0000337!7.97e-07!23;CL:0002453!9.46e-07!8|ontology_enrichment_celltype_v019_2=CL:0002319,1.13e-15,43;CL:0000221,3.93e-15,44;CL:0000133,3.93e-15,44;CL:0002453,9.99e-12,8;CL:0000333,3.89e-11,10;CL:0000095,3.89e-11,10;CL:0000243,3.89e-11,10;CL:0000123,3.89e-11,10;CL:0000125,3.89e-11,10;CL:0000030,3.89e-11,10;CL:0000339,3.89e-11,10;CL:0002321,8.53e-11,70;CL:0000128,6.85e-09,6;CL:0000126,6.85e-09,6;CL:0000127,6.85e-09,6;CL:0000393,1.66e-08,39;CL:0000211,1.66e-08,39;CL:0000117,6.64e-08,23;CL:0000337,6.64e-08,23;CL:0000540,8.77e-08,33;CL:0000047,8.77e-08,33;CL:0000031,8.77e-08,33;CL:0000404,8.77e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.00e-25!75;UBERON:0001016!4.00e-25!75;UBERON:0001017!1.44e-24!73;UBERON:0005743!1.44e-24!73;UBERON:0004121!4.12e-23!102;UBERON:0000924!4.12e-23!102;UBERON:0006601!4.12e-23!102;UBERON:0000033!7.89e-18!63;UBERON:0002346!1.82e-16!71;UBERON:0003075!1.82e-16!71;UBERON:0007284!1.82e-16!71;UBERON:0001049!4.54e-16!52;UBERON:0005068!4.54e-16!52;UBERON:0006241!4.54e-16!52;UBERON:0007135!4.54e-16!52;UBERON:0000955!1.67e-15!50;UBERON:0006238!1.67e-15!50;UBERON:0002616!4.46e-15!49;UBERON:0002020!3.13e-13!34;UBERON:0003056!2.45e-11!49;UBERON:0002791!4.58e-11!29;UBERON:0003528!4.58e-11!29;UBERON:0001893!4.58e-11!29;UBERON:0003080!3.78e-10!40;UBERON:0007811!8.33e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0002780!1.28e-09!39;UBERON:0001890!1.28e-09!39;UBERON:0006240!1.28e-09!39;UBERON:0000956!8.19e-08!21;UBERON:0001869!8.19e-08!21;UBERON:0000203!8.19e-08!21;UBERON:0002619!1.12e-07!17;UBERON:0002021!1.77e-07!10;UBERON:0000411!1.77e-07!10;UBERON:0001950!1.77e-07!10;UBERON:0003076!2.73e-07!12;UBERON:0003057!2.73e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.04e-34,75;UBERON:0001017,1.71e-33,73;UBERON:0000073,3.14e-26,54;UBERON:0004121,5.39e-26,95;UBERON:0000924,5.39e-26,95;UBERON:0006601,5.39e-26,95;UBERON:0001049,7.03e-24,52;UBERON:0005068,7.03e-24,52;UBERON:0006241,7.03e-24,52;UBERON:0007135,7.03e-24,52;UBERON:0000955,4.43e-20,47;UBERON:0006238,4.43e-20,47;UBERON:0002346,1.40e-19,64;UBERON:0003075,1.40e-19,64;UBERON:0007284,1.40e-19,64;UBERON:0002616,2.56e-19,46;UBERON:0002020,2.62e-19,34;UBERON:0003528,4.96e-16,29;UBERON:0002791,4.96e-16,29;UBERON:0001893,4.96e-16,29;UBERON:0010371,8.44e-16,73;UBERON:0003080,7.52e-14,40;UBERON:0002619,1.16e-13,17;UBERON:0002021,3.85e-13,10;UBERON:0000411,3.85e-13,10;UBERON:0001950,3.85e-13,10;UBERON:0002780,6.45e-13,39;UBERON:0001890,6.45e-13,39;UBERON:0006240,6.45e-13,39;UBERON:0000956,5.38e-12,21;UBERON:0001869,5.38e-12,21;UBERON:0000203,5.38e-12,21;UBERON:0003076,9.13e-12,12;UBERON:0003057,9.13e-12,12;UBERON:0003056,6.79e-11,49;UBERON:0010314,2.38e-10,92;UBERON:0004733,1.39e-07,6;UBERON:0004732,1.39e-07,6;UBERON:0002028,1.39e-07,6;UBERON:0007277,1.39e-07,6;UBERON:0011216,3.08e-07,194;UBERON:0004111,3.70e-07,122;UBERON:0000025,4.07e-07,114|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.92616169317078,1.83546752161682,2.34717403304412,11.1192829754028,6.15121311656521,10.304784650937,3.91961980551015,2.87505128729943,0,0,0,0.771778308107841,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,2.03306719241479,0.889294796111139,0,1.97773272513395,0,8.68840320503374,21.9004434033286,0.414758449233911,0.270011876663381,0.210324961351382,4.28476476605705,3.75476519617743,0.244981598429908,0.0958454710182364,0,8.8092704799511,3.70293280447044,3.99376986466233,0.791317726381163,1.00636407962651,1.04182674111352,8.37548997004143,3.93933827022176,2.29197371665215,2.65165726926301,1.70846016958924,0.372798891650601,0.302904773332736,2.34271836331035,0.289864488701678,0,0,0,0,0,1.54488862144927,1.87473354835864,2.33807404142582,2.12003744706204,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,1.29413479957927,0.662524555381181,0,1.86391761218122,1.17112318804619,1.04723353406728,0,0,0,0,3.59497534571574,4.57500602818627,0.376963056338593,3.30266208365325,2.55715457330331,2.90903262383384,3.24482526135515,0.611036183101898,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77552 | |||
|HGNC= | |||
|MCL_coexpression_id=303 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=143bp_to_ENSMUST00000159181_5end | |||
|cluster_id=chr1:137271496..137271510,- | |||
|description=CAGE_peak_4_at_Shisa4_5end | |||
|id=chr1:137271496..137271510,- | |||
|ontology_enrichment_celltype=CL:0000221!3.87e-14!44;CL:0000133!3.87e-14!44;CL:0002319!5.78e-14!43;CL:0000055!5.85e-14!50;CL:0000393!1.89e-09!39;CL:0000211!1.89e-09!39;CL:0000540!1.07e-08!33;CL:0000047!1.07e-08!33;CL:0000031!1.07e-08!33;CL:0000404!1.07e-08!33;CL:0002321!2.48e-07!70;CL:0000220!2.48e-07!70;CL:0000333!6.38e-07!10;CL:0000095!6.38e-07!10;CL:0000243!6.38e-07!10;CL:0000123!6.38e-07!10;CL:0000125!6.38e-07!10;CL:0000030!6.38e-07!10;CL:0000339!6.38e-07!10;CL:0000117!7.97e-07!23;CL:0000337!7.97e-07!23;CL:0002453!9.46e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.13e-15,43;CL:0000221,3.93e-15,44;CL:0000133,3.93e-15,44;CL:0002453,9.99e-12,8;CL:0000333,3.89e-11,10;CL:0000095,3.89e-11,10;CL:0000243,3.89e-11,10;CL:0000123,3.89e-11,10;CL:0000125,3.89e-11,10;CL:0000030,3.89e-11,10;CL:0000339,3.89e-11,10;CL:0002321,8.53e-11,70;CL:0000128,6.85e-09,6;CL:0000126,6.85e-09,6;CL:0000127,6.85e-09,6;CL:0000393,1.66e-08,39;CL:0000211,1.66e-08,39;CL:0000117,6.64e-08,23;CL:0000337,6.64e-08,23;CL:0000540,8.77e-08,33;CL:0000047,8.77e-08,33;CL:0000031,8.77e-08,33;CL:0000404,8.77e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.00e-25!75;UBERON:0001016!4.00e-25!75;UBERON:0001017!1.44e-24!73;UBERON:0005743!1.44e-24!73;UBERON:0004121!4.12e-23!102;UBERON:0000924!4.12e-23!102;UBERON:0006601!4.12e-23!102;UBERON:0000033!7.89e-18!63;UBERON:0002346!1.82e-16!71;UBERON:0003075!1.82e-16!71;UBERON:0007284!1.82e-16!71;UBERON:0001049!4.54e-16!52;UBERON:0005068!4.54e-16!52;UBERON:0006241!4.54e-16!52;UBERON:0007135!4.54e-16!52;UBERON:0000955!1.67e-15!50;UBERON:0006238!1.67e-15!50;UBERON:0002616!4.46e-15!49;UBERON:0002020!3.13e-13!34;UBERON:0003056!2.45e-11!49;UBERON:0002791!4.58e-11!29;UBERON:0003528!4.58e-11!29;UBERON:0001893!4.58e-11!29;UBERON:0003080!3.78e-10!40;UBERON:0007811!8.33e-10!86;UBERON:0000153!1.25e-09!94;UBERON:0002780!1.28e-09!39;UBERON:0001890!1.28e-09!39;UBERON:0006240!1.28e-09!39;UBERON:0000956!8.19e-08!21;UBERON:0001869!8.19e-08!21;UBERON:0000203!8.19e-08!21;UBERON:0002619!1.12e-07!17;UBERON:0002021!1.77e-07!10;UBERON:0000411!1.77e-07!10;UBERON:0001950!1.77e-07!10;UBERON:0003076!2.73e-07!12;UBERON:0003057!2.73e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.04e-34,75;UBERON:0001017,1.71e-33,73;UBERON:0000073,3.14e-26,54;UBERON:0004121,5.39e-26,95;UBERON:0000924,5.39e-26,95;UBERON:0006601,5.39e-26,95;UBERON:0001049,7.03e-24,52;UBERON:0005068,7.03e-24,52;UBERON:0006241,7.03e-24,52;UBERON:0007135,7.03e-24,52;UBERON:0000955,4.43e-20,47;UBERON:0006238,4.43e-20,47;UBERON:0002346,1.40e-19,64;UBERON:0003075,1.40e-19,64;UBERON:0007284,1.40e-19,64;UBERON:0002616,2.56e-19,46;UBERON:0002020,2.62e-19,34;UBERON:0003528,4.96e-16,29;UBERON:0002791,4.96e-16,29;UBERON:0001893,4.96e-16,29;UBERON:0010371,8.44e-16,73;UBERON:0003080,7.52e-14,40;UBERON:0002619,1.16e-13,17;UBERON:0002021,3.85e-13,10;UBERON:0000411,3.85e-13,10;UBERON:0001950,3.85e-13,10;UBERON:0002780,6.45e-13,39;UBERON:0001890,6.45e-13,39;UBERON:0006240,6.45e-13,39;UBERON:0000956,5.38e-12,21;UBERON:0001869,5.38e-12,21;UBERON:0000203,5.38e-12,21;UBERON:0003076,9.13e-12,12;UBERON:0003057,9.13e-12,12;UBERON:0003056,6.79e-11,49;UBERON:0010314,2.38e-10,92;UBERON:0004733,1.39e-07,6;UBERON:0004732,1.39e-07,6;UBERON:0002028,1.39e-07,6;UBERON:0007277,1.39e-07,6;UBERON:0011216,3.08e-07,194;UBERON:0004111,3.70e-07,122;UBERON:0000025,4.07e-07,114 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.92616169317078,1.83546752161682,2.34717403304412,11.1192829754028,6.15121311656521,10.304784650937,3.91961980551015,2.87505128729943,0,0,0,0.771778308107841,0.286533439938757,0,0.404632921719196,1.05798195854407,1.26766280701236,2.03306719241479,0.889294796111139,0,1.97773272513395,0,8.68840320503374,21.9004434033286,0.414758449233911,0.270011876663381,0.210324961351382,4.28476476605705,3.75476519617743,0.244981598429908,0.0958454710182364,0,8.8092704799511,3.70293280447044,3.99376986466233,0.791317726381163,1.00636407962651,1.04182674111352,8.37548997004143,3.93933827022176,2.29197371665215,2.65165726926301,1.70846016958924,0.372798891650601,0.302904773332736,2.34271836331035,0.289864488701678,0,0,0,0,0,1.54488862144927,1.87473354835864,2.33807404142582,2.12003744706204,0.563373679106722,2.56652954828636,0,7.11066703153331,0.432982082022428,0,0,0.11418387971906,0,0.29688427812965,0.520455980298408,0.304465478312141,0.461230994512117,0,0.23517741427141,0.125666591329675,0,0.433798070759735,0,1.29413479957927,0.662524555381181,0,1.86391761218122,1.17112318804619,1.04723353406728,0,0,0,0,3.59497534571574,4.57500602818627,0.376963056338593,3.30266208365325,2.55715457330331,2.90903262383384,3.24482526135515,0.611036183101898,0.124406970610093,0.252722758433675,0.210441855886474,0.650602214813519,0.229902104433473,0.540186389416048,0.30140963567143,0.612328492361951,0.640568601424249,0.749613796477831,1.03481348295606,0.215567992932842,0.189106080167819,0.351902248327898,0.876782929710299,0,0.696504333044333,0.411564272815887,0.199034266818493,0,0,0,0,0.938104239924385,0.540186184383045,0.710234206755631,0.393528463494808,0.308534225774757,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,3.15434922846191,1.02904612379284,0,0,0.426576501070468,0.232236671860439,0.38660238396628,0,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.38992817423824,0,0,0,0.569003702859245,0,1.1270773567308,0.407302655690628,0.387904974335251,0.631222379012867,0.442655759869801,0.738050739898011,0.31399745568275,0.246794327843601,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0,0.518054945597687,0,0,0,0,0.275936746304732,5.61927064957272,3.6335622843583,0.655739781506702,2.27223834483936,0.631016438832513,0,1.07711698866399,1.91175038362042,1.11399337041197,1.69845918473299,0.809621403349789,0.584511715822624,0.790575555893047,1.28528526568723,0,0,0,0.494910368917606,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.712994756769443,0,0,2.06271086496374,0,0.540183282093931,0.258717367565509,0.428674070063185,0,0,0.164549020602121,0.304464949114599,0.469343416127421,0,0.661585194164886,0,0.161464426695906,0.241251699712623,0,0,0,7.04616147639937,0.341741761595705,0,0,0,0,0,0,0,0,0,0.474503990371703,0,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,1.86401793926078,0,0,0,0.194451188344048,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.205421914329655,0,0.179026695667481,0,0,0,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0.116876902181569,0.680191150845634,0.221985953374065,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,2.50786052017682,3.3885110557024,3.22227665555024,5.15605962095457,2.92150409984269,1.37016503954128,3.7769694869485,3.37511250115903,5.85417564191487,7.25027854374727,8.80192529978094,0.62272408550506,0.399024873401031,0.682934423016537,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0,0.50695859978048,0,0.187283014939765,0.512201219238954,0.287177344778066,0.952587382566147,0.347652977834566,0.38581844092741,1.23625770240992,0.588795680537589,1.02860775715625,0.354951612318675,0.476872379894642,0.290692833264657,0.188218760830661,0.25384382367503,0.548783918618318,0.263069711437843,0.135804113845862,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.464810523557898,0.192906610981141,0.999242311751784,0.701794825336225,0.644613162144895,0.765153328275374,2.64709702943419,1.15933917810211 | |||
|short_description=p4@Shisa4 | |||
}} |
Latest revision as of 10:42, 26 September 2015
Short description: | p4@Shisa4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Shisa4_5end |
Coexpression cluster: | MCL_coexpression_mm9:303 |
Association with transcript: | 143bp_to_ENSMUST00000159181_5end |
EntrezGene: | Shisa4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.13e-15 | 43 |
ectodermal cell | 3.93e-15 | 44 |
neurectodermal cell | 3.93e-15 | 44 |
oligodendrocyte precursor cell | 9.99e-12 | 8 |
migratory neural crest cell | 3.89e-11 | 10 |
neuron associated cell | 3.89e-11 | 10 |
glial cell (sensu Vertebrata) | 3.89e-11 | 10 |
neuron associated cell (sensu Vertebrata) | 3.89e-11 | 10 |
glial cell | 3.89e-11 | 10 |
glioblast | 3.89e-11 | 10 |
glioblast (sensu Vertebrata) | 3.89e-11 | 10 |
embryonic cell | 8.53e-11 | 70 |
oligodendrocyte | 6.85e-09 | 6 |
macroglial cell | 6.85e-09 | 6 |
astrocyte | 6.85e-09 | 6 |
electrically responsive cell | 1.66e-08 | 39 |
electrically active cell | 1.66e-08 | 39 |
CNS neuron (sensu Vertebrata) | 6.64e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.64e-08 | 23 |
neuron | 8.77e-08 | 33 |
neuronal stem cell | 8.77e-08 | 33 |
neuroblast | 8.77e-08 | 33 |
electrically signaling cell | 8.77e-08 | 33 |