FFCP PHASE1:Mm9::chr17:37183500..37183545,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54393 | |EntrezGene=54393 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=87 | |||
|TSSclassifier=NA | |||
|UniProt=Q3TWR2 | |UniProt=Q3TWR2 | ||
|association_with_transcript=0bp_to_ENSMUST00000172789,uc008cmc.1_5end | |association_with_transcript=0bp_to_ENSMUST00000172789,uc008cmc.1_5end | ||
|cluster_id=chr17:37183500..37183545,+ | |||
|description=CAGE_peak_4_at_Gabbr1_5end | |description=CAGE_peak_4_at_Gabbr1_5end | ||
|id=chr17:37183500..37183545,+ | |id=chr17:37183500..37183545,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.96e-15!33;CL:0000047!1.96e-15!33;CL:0000031!1.96e-15!33;CL:0000404!1.96e-15!33;CL:0000117!7.15e-15!23;CL:0000337!7.15e-15!23;CL:0000393!2.88e-14!39;CL:0000211!2.88e-14!39;CL:0002319!6.71e-14!43;CL:0000221!1.50e-13!44;CL:0000133!1.50e-13!44;CL:0000055!1.78e-12!50 | |ontology_enrichment_celltype=CL:0000540!1.96e-15!33;CL:0000047!1.96e-15!33;CL:0000031!1.96e-15!33;CL:0000404!1.96e-15!33;CL:0000117!7.15e-15!23;CL:0000337!7.15e-15!23;CL:0000393!2.88e-14!39;CL:0000211!2.88e-14!39;CL:0002319!6.71e-14!43;CL:0000221!1.50e-13!44;CL:0000133!1.50e-13!44;CL:0000055!1.78e-12!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.87e-21,23;CL:0000337,6.87e-21,23;CL:0000540,1.05e-20,33;CL:0000047,1.05e-20,33;CL:0000031,1.05e-20,33;CL:0000404,1.05e-20,33;CL:0000393,1.08e-17,39;CL:0000211,1.08e-17,39;CL:0002319,3.22e-16,43;CL:0000221,1.43e-15,44;CL:0000133,1.43e-15,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.83e-27!73;UBERON:0005743!4.83e-27!73;UBERON:0000073!1.06e-26!75;UBERON:0001016!1.06e-26!75;UBERON:0002346!2.42e-24!71;UBERON:0003075!2.42e-24!71;UBERON:0007284!2.42e-24!71;UBERON:0004121!8.94e-24!102;UBERON:0000924!8.94e-24!102;UBERON:0006601!8.94e-24!102;UBERON:0001049!1.36e-21!52;UBERON:0005068!1.36e-21!52;UBERON:0006241!1.36e-21!52;UBERON:0007135!1.36e-21!52;UBERON:0000955!3.98e-19!50;UBERON:0006238!3.98e-19!50;UBERON:0002616!7.70e-19!49;UBERON:0000033!1.22e-18!63;UBERON:0003056!4.94e-18!49;UBERON:0002020!8.45e-17!34;UBERON:0003080!4.28e-16!40;UBERON:0002780!1.91e-15!39;UBERON:0001890!1.91e-15!39;UBERON:0006240!1.91e-15!39;UBERON:0002791!2.84e-13!29;UBERON:0003528!2.84e-13!29;UBERON:0001893!2.84e-13!29;UBERON:0007811!9.63e-10!86;UBERON:0000153!4.30e-09!94;UBERON:0000956!2.72e-08!21;UBERON:0001869!2.72e-08!21;UBERON:0000203!2.72e-08!21 | |ontology_enrichment_uberon=UBERON:0001017!4.83e-27!73;UBERON:0005743!4.83e-27!73;UBERON:0000073!1.06e-26!75;UBERON:0001016!1.06e-26!75;UBERON:0002346!2.42e-24!71;UBERON:0003075!2.42e-24!71;UBERON:0007284!2.42e-24!71;UBERON:0004121!8.94e-24!102;UBERON:0000924!8.94e-24!102;UBERON:0006601!8.94e-24!102;UBERON:0001049!1.36e-21!52;UBERON:0005068!1.36e-21!52;UBERON:0006241!1.36e-21!52;UBERON:0007135!1.36e-21!52;UBERON:0000955!3.98e-19!50;UBERON:0006238!3.98e-19!50;UBERON:0002616!7.70e-19!49;UBERON:0000033!1.22e-18!63;UBERON:0003056!4.94e-18!49;UBERON:0002020!8.45e-17!34;UBERON:0003080!4.28e-16!40;UBERON:0002780!1.91e-15!39;UBERON:0001890!1.91e-15!39;UBERON:0006240!1.91e-15!39;UBERON:0002791!2.84e-13!29;UBERON:0003528!2.84e-13!29;UBERON:0001893!2.84e-13!29;UBERON:0007811!9.63e-10!86;UBERON:0000153!4.30e-09!94;UBERON:0000956!2.72e-08!21;UBERON:0001869!2.72e-08!21;UBERON:0000203!2.72e-08!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.11e-31,73;UBERON:0001016,1.20e-30,75;UBERON:0002346,3.61e-27,64;UBERON:0003075,3.61e-27,64;UBERON:0007284,3.61e-27,64;UBERON:0004121,1.02e-26,95;UBERON:0000924,1.02e-26,95;UBERON:0006601,1.02e-26,95;UBERON:0000073,1.71e-25,54;UBERON:0001049,3.19e-24,52;UBERON:0005068,3.19e-24,52;UBERON:0006241,3.19e-24,52;UBERON:0007135,3.19e-24,52;UBERON:0002020,1.35e-21,34;UBERON:0010371,1.92e-21,73;UBERON:0000955,5.22e-19,47;UBERON:0006238,5.22e-19,47;UBERON:0002616,1.32e-18,46;UBERON:0003056,1.35e-18,49;UBERON:0003080,1.48e-17,40;UBERON:0010314,6.76e-17,92;UBERON:0002780,1.11e-16,39;UBERON:0001890,1.11e-16,39;UBERON:0006240,1.11e-16,39;UBERON:0003528,1.35e-16,29;UBERON:0002791,1.35e-16,29;UBERON:0001893,1.35e-16,29;UBERON:0000956,1.27e-09,21;UBERON:0001869,1.27e-09,21;UBERON:0000203,1.27e-09,21;UBERON:0002420,7.53e-09,8;UBERON:0007245,7.53e-09,8;UBERON:0010009,7.53e-09,8;UBERON:0010011,7.53e-09,8;UBERON:0000454,7.53e-09,8;UBERON:0002619,2.70e-07,17;UBERON:0003076,2.74e-07,12;UBERON:0003057,2.74e-07,12;UBERON:0002240,3.09e-07,6;UBERON:0005174,3.09e-07,6;UBERON:0001137,3.09e-07,6 | |||
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| ||
|short_description=p4@Gabbr1 | |short_description=p4@Gabbr1 | ||
}} | }} |
Latest revision as of 11:30, 26 September 2015
Short description: | p4@Gabbr1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Gabbr1_5end |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | 0bp_to_ENSMUST00000172789, uc008cmc.1_5end |
EntrezGene: | Gabbr1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.87e-21 | 23 |
neuroblast (sensu Vertebrata) | 6.87e-21 | 23 |
neuron | 1.05e-20 | 33 |
neuronal stem cell | 1.05e-20 | 33 |
neuroblast | 1.05e-20 | 33 |
electrically signaling cell | 1.05e-20 | 33 |
electrically responsive cell | 1.08e-17 | 39 |
electrically active cell | 1.08e-17 | 39 |
neural cell | 3.22e-16 | 43 |
ectodermal cell | 1.43e-15 | 44 |
neurectodermal cell | 1.43e-15 | 44 |