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FFCP PHASE1:Mm9::chr12:47920030..47920045,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=664883
|EntrezGene=664883
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=Q9JKN6
|UniProt=Q9JKN6
|association_with_transcript=-268bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|association_with_transcript=-268bp_to_ENSMUST00000021438,NM_021361,uc007nmd.2,uc007nme.2_5end
|cluster_id=chr12:47920030..47920045,-
|description=CAGE_peak_4_at_Nova1_5end
|description=CAGE_peak_4_at_Nova1_5end
|id=chr12:47920030..47920045,-
|id=chr12:47920030..47920045,-
|ontology_enrichment_celltype=CL:0000117!9.99e-13!23;CL:0000337!9.99e-13!23;CL:0000540!1.05e-12!33;CL:0000047!1.05e-12!33;CL:0000031!1.05e-12!33;CL:0000404!1.05e-12!33;CL:0002319!1.36e-10!43;CL:0000221!6.09e-10!44;CL:0000133!6.09e-10!44;CL:0000393!4.53e-09!39;CL:0000211!4.53e-09!39;CL:0000055!2.11e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.77e-16,23;CL:0000337,1.77e-16,23;CL:0000540,3.18e-12,33;CL:0000047,3.18e-12,33;CL:0000031,3.18e-12,33;CL:0000404,3.18e-12,33;CL:0002319,3.73e-09,43;CL:0000393,3.97e-09,39;CL:0000211,3.97e-09,39;CL:0000221,9.17e-09,44;CL:0000133,9.17e-09,44
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!9.60e-25!73;UBERON:0005743!9.60e-25!73;UBERON:0004121!2.20e-24!102;UBERON:0000924!2.20e-24!102;UBERON:0006601!2.20e-24!102;UBERON:0000073!4.50e-24!75;UBERON:0001016!4.50e-24!75;UBERON:0001049!2.09e-19!52;UBERON:0005068!2.09e-19!52;UBERON:0006241!2.09e-19!52;UBERON:0007135!2.09e-19!52;UBERON:0002346!2.44e-19!71;UBERON:0003075!2.44e-19!71;UBERON:0007284!2.44e-19!71;UBERON:0000033!7.23e-19!63;UBERON:0000955!1.27e-17!50;UBERON:0006238!1.27e-17!50;UBERON:0002616!3.89e-17!49;UBERON:0003056!2.84e-16!49;UBERON:0002020!3.01e-15!34;UBERON:0003080!1.93e-14!40;UBERON:0002780!8.59e-14!39;UBERON:0001890!8.59e-14!39;UBERON:0006240!8.59e-14!39;UBERON:0002791!8.39e-12!29;UBERON:0003528!8.39e-12!29;UBERON:0001893!8.39e-12!29;UBERON:0000468!1.32e-07!333;UBERON:0007811!1.94e-07!86;UBERON:0000956!3.91e-07!21;UBERON:0001869!3.91e-07!21;UBERON:0000203!3.91e-07!21;UBERON:0002619!4.36e-07!17;UBERON:0000153!9.26e-07!94
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-22,73;UBERON:0004121,2.06e-21,95;UBERON:0000924,2.06e-21,95;UBERON:0006601,2.06e-21,95;UBERON:0000073,2.21e-21,54;UBERON:0001016,3.26e-21,75;UBERON:0001049,1.30e-19,52;UBERON:0005068,1.30e-19,52;UBERON:0006241,1.30e-19,52;UBERON:0007135,1.30e-19,52;UBERON:0002346,9.86e-19,64;UBERON:0003075,9.86e-19,64;UBERON:0007284,9.86e-19,64;UBERON:0002020,2.13e-17,34;UBERON:0010371,2.26e-17,73;UBERON:0000955,9.91e-15,47;UBERON:0006238,9.91e-15,47;UBERON:0002616,4.25e-14,46;UBERON:0003056,8.05e-13,49;UBERON:0003528,1.46e-12,29;UBERON:0002791,1.46e-12,29;UBERON:0001893,1.46e-12,29;UBERON:0003080,5.47e-12,40;UBERON:0002780,3.50e-11,39;UBERON:0001890,3.50e-11,39;UBERON:0006240,3.50e-11,39;UBERON:0010314,2.08e-09,92;UBERON:0003076,4.53e-09,12;UBERON:0003057,4.53e-09,12;UBERON:0002420,6.38e-09,8;UBERON:0007245,6.38e-09,8;UBERON:0010009,6.38e-09,8;UBERON:0010011,6.38e-09,8;UBERON:0000454,6.38e-09,8;UBERON:0002240,7.39e-08,6;UBERON:0005174,7.39e-08,6;UBERON:0001137,7.39e-08,6;UBERON:0002619,2.89e-07,17;UBERON:0001948,8.27e-07,5;UBERON:0002315,8.27e-07,5
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.878744730937887,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,0,0,17.3992156339254,22.7466121086974,16.4796164911607,0,0,0,0,0,0.599200221036809,1.92109152660777,0.518448061542388,0.405017814995072,0.210324961351382,12.8542942981712,10.8225585066291,1.46988959057945,1.53352753629178,1.83843757322004,7.70811166995721,8.04430229936683,13.3637683932932,13.3205150607496,15.9188499868193,13.5437476344758,10.0505879640497,6.75315132038016,6.26472815884921,16.7938293719991,18.0812034614861,14.7255562201987,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,0,0.647067399789637,0.662524555381181,0,0,9.07620470735796,7.12118803165747,0,0,0,0,11.2342979553617,4.57500602818627,2.38743269014442,3.47648640384553,1.27857728665165,9.76603809429932,5.19172041816825,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,1.04096354370163,0.689706313300419,1.62055916824814,0.90422890701429,1.7009124787832,1.5373646434182,1.12442069471675,1.03481348295606,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,2.10289948564127,1.44066457330998,0,0,0.426576501070468,0.464473343720877,0,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.315270288212382,0,0,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0.827810238914197,9.79358598925531,8.20481806145422,0.163934945376675,1.76729649043061,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,1.33679204449436,1.13230612315533,2.42886421004937,0.584511715822624,0.395287777946524,2.24924921495265,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,0.948110273807448,2.10837217149998,0,1.02131881726136,0.720244376125241,0.517434735131018,0.643011105094777,1.06404140185364,0.891844088010353,0.658196082408484,0.913394847343798,0.469343416127421,0,0.441056796109924,3.95727007059552,1.29171541356724,1.20625849856312,0.477489376012546,0.820704498725306,0.291480836629851,13.7214723487777,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.655087691238533,0.404593039154462,0.41326727862668,0,0.129614973291793,0.621339313086926,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,0,0.579568782096571,1.12609485270709,2.38097111547445,1.07184189539533,0,2.82375921308533,2.76195141904306,3.43737308063638,2.92150409984269,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.62513927187364,2.5888015587591,1.66059756134683,2.79317411380722,1.70733605754134,2.43106717068294,3.35381060204772,1.10306105070008,1.77797382241292,2.47242068686673,1.60459604795908,2.77966932940177,1.77435509923168,1.69763707247469,2.06011316433741,2.17685518176556,2.75690250986944,4.28664322154766,1.50649623728312,1.73618298417335,0.824171801606613,1.47198920134397,1.37147700954166,1.59728225543404,1.66905332963125,2.18019624948493,2.07040636913727,1.94613598150856,1.64635175585495,2.89376682581627,1.7654534799962,1.68342681497322,2.25406534435931,1.28055827088233,2.45538625901814,0.619747364743864,0.964533054905707,1.99848462350357,1.40358965067245,1.71896843238639,2.86932498103265,0.441182838239031,1.15933917810211
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.878744730937887,1.36100929351998,0.55994568650145,0,0,0,0,0.257259436035947,0,0,17.3992156339254,22.7466121086974,16.4796164911607,0,0,0,0,0,0.599200221036809,1.92109152660777,0.518448061542388,0.405017814995072,0.210324961351382,12.8542942981712,10.8225585066291,1.46988959057945,1.53352753629178,1.83843757322004,7.70811166995721,8.04430229936683,13.3637683932932,13.3205150607496,15.9188499868193,13.5437476344758,10.0505879640497,6.75315132038016,6.26472815884921,16.7938293719991,18.0812034614861,14.7255562201987,0.075726193333184,0.226714680320357,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.520455980298408,0,0.230615497256059,0.150722640552623,0.117588707135705,0.125666591329675,0,0.722996784599558,0,0.647067399789637,0.662524555381181,0,0,9.07620470735796,7.12118803165747,0,0,0,0,11.2342979553617,4.57500602818627,2.38743269014442,3.47648640384553,1.27857728665165,9.76603809429932,5.19172041816825,0.305518091550949,0.373220911830279,0.252722758433675,0.420883711772948,1.04096354370163,0.689706313300419,1.62055916824814,0.90422890701429,1.7009124787832,1.5373646434182,1.12442069471675,1.03481348295606,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.61734640922383,0,0,0,0,0.207125772535502,0.703578179943289,0,0.473489471170421,0,0.154267112887378,0.232533944750408,0,0,0.16455984991348,0,0.162137619091711,0.292399974850665,0.219550115291051,0.134206418760372,2.10289948564127,1.44066457330998,0,0,0.426576501070468,0.464473343720877,0,0,0,0.190225626112559,0,0.164698954724011,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0,0.189667900953082,0,0,0.610953983535943,0.193952487167626,0,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.315270288212382,0,0,0.327726629431476,0.863424909329478,0.433947175744535,0,0,0,0.827810238914197,9.79358598925531,8.20481806145422,0.163934945376675,1.76729649043061,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,1.33679204449436,1.13230612315533,2.42886421004937,0.584511715822624,0.395287777946524,2.24924921495265,0.283880170416537,0.178065603667255,0.162886959353576,0.494910368917606,1.32745138339963,0.242780636154981,0,0.754420319023592,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,1.42598951353889,0.948110273807448,2.10837217149998,0,1.02131881726136,0.720244376125241,0.517434735131018,0.643011105094777,1.06404140185364,0.891844088010353,0.658196082408484,0.913394847343798,0.469343416127421,0,0.441056796109924,3.95727007059552,1.29171541356724,1.20625849856312,0.477489376012546,0.820704498725306,0.291480836629851,13.7214723487777,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.216010681643603,0,0.655087691238533,0.404593039154462,0.41326727862668,0,0.129614973291793,0.621339313086926,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0.168956125490778,0.352071715937262,0,0.104859344425711,0.241584120826006,0.576060012515731,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,0,0.579568782096571,1.12609485270709,2.38097111547445,1.07184189539533,0,2.82375921308533,2.76195141904306,3.43737308063638,2.92150409984269,0.685082519770642,0.755393897389701,2.02506750069542,1.35096360967266,3.62513927187364,2.5888015587591,1.66059756134683,2.79317411380722,1.70733605754134,2.43106717068294,3.35381060204772,1.10306105070008,1.77797382241292,2.47242068686673,1.60459604795908,2.77966932940177,1.77435509923168,1.69763707247469,2.06011316433741,2.17685518176556,2.75690250986944,4.28664322154766,1.50649623728312,1.73618298417335,0.824171801606613,1.47198920134397,1.37147700954166,1.59728225543404,1.66905332963125,2.18019624948493,2.07040636913727,1.94613598150856,1.64635175585495,2.89376682581627,1.7654534799962,1.68342681497322,2.25406534435931,1.28055827088233,2.45538625901814,0.619747364743864,0.964533054905707,1.99848462350357,1.40358965067245,1.71896843238639,2.86932498103265,0.441182838239031,1.15933917810211
|short_description=p4@Nova1
|short_description=p4@Nova1
}}
}}

Latest revision as of 15:25, 26 September 2015

Short description:p4@Nova1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Nova1_5end
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: -268bp_to_ENSMUST00000021438, NM_021361, uc007nmd.2, uc007nme.2_5end
EntrezGene:Nova1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Nova1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C317.40
Mouse Granule cells, donor2.CNhs12357.11731-123E322.75
Mouse Granule cells, donor3.CNhs12108.11636-122C716.48
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.82
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.53
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D713.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.32
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.26
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F618.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.73
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B29.08
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A411.23
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.39
cortex, adult.CNhs10473.12-14D53.48
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F29.77
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.54
eyeball, neonate N02.CNhs11205.1551-44G81.12
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G11.44
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C29.79
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.64
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.96
skin, neonate N00.CNhs11124.650-25G41.29
skin, neonate N03.CNhs11215.662-22H31.21
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C913.72
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.92
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.63
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.66
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H21.71
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.70
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.76
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.77e-1623
neuroblast (sensu Vertebrata)1.77e-1623
neuron3.18e-1233
neuronal stem cell3.18e-1233
neuroblast3.18e-1233
electrically signaling cell3.18e-1233
neural cell3.73e-0943
electrically responsive cell3.97e-0939
electrically active cell3.97e-0939
ectodermal cell9.17e-0944
neurectodermal cell9.17e-0944

Uber anatomy
Ontology termp-valuen
central nervous system2.88e-2273
ectoderm-derived structure2.06e-2195
ectoderm2.06e-2195
presumptive ectoderm2.06e-2195
regional part of nervous system2.21e-2154
nervous system3.26e-2175
neural tube1.30e-1952
neural rod1.30e-1952
future spinal cord1.30e-1952
neural keel1.30e-1952
neurectoderm9.86e-1964
neural plate9.86e-1964
presumptive neural plate9.86e-1964
gray matter2.13e-1734
ecto-epithelium2.26e-1773
brain9.91e-1547
future brain9.91e-1547
regional part of brain4.25e-1446
pre-chordal neural plate8.05e-1349
brain grey matter1.46e-1229
regional part of telencephalon1.46e-1229
telencephalon1.46e-1229
anterior neural tube5.47e-1240
regional part of forebrain3.50e-1139
forebrain3.50e-1139
future forebrain3.50e-1139
structure with developmental contribution from neural crest2.08e-0992
posterior neural tube4.53e-0912
chordal neural plate4.53e-0912
basal ganglion6.38e-098
nuclear complex of neuraxis6.38e-098
aggregate regional part of brain6.38e-098
collection of basal ganglia6.38e-098
cerebral subcortex6.38e-098
spinal cord7.39e-086
dorsal region element7.39e-086
dorsum7.39e-086
regional part of cerebral cortex2.89e-0717
regional part of spinal cord8.27e-075
gray matter of spinal cord8.27e-075
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