FFCP PHASE1:Mm9::chr15:35867035..35867047,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12864,621837 | |EntrezGene=12864,621837 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9CPQ1 | |UniProt=Q9CPQ1 | ||
|association_with_transcript=352bp_to_ENSMUST00000153512_5end | |association_with_transcript=352bp_to_ENSMUST00000153512_5end | ||
|cluster_id=chr15:35867035..35867047,- | |||
|description=CAGE_peak_3_at_Cox6c_5end,CAGE_peak_3_at_Gm6265_5end | |description=CAGE_peak_3_at_Cox6c_5end,CAGE_peak_3_at_Gm6265_5end | ||
|id=chr15:35867035..35867047,- | |id=chr15:35867035..35867047,- | ||
|ontology_enrichment_celltype=CL:0000548!1.15e-13!115;CL:0000004!1.15e-13!115;CL:0000255!1.15e-13!115;CL:0000055!3.53e-13!50;CL:0002371!5.33e-13!118;CL:0002321!7.11e-13!70;CL:0000220!7.11e-13!70;CL:0002319!3.89e-12!43;CL:0000144!7.13e-12!121;CL:0000012!7.13e-12!121;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0000117!3.07e-10!23;CL:0000337!3.07e-10!23;CL:0000723!3.34e-10!91;CL:0000048!3.34e-10!91;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0000034!1.28e-09!97;CL:0000540!4.05e-09!33;CL:0000047!4.05e-09!33;CL:0000031!4.05e-09!33;CL:0000404!4.05e-09!33 | |ontology_enrichment_celltype=CL:0000548!1.15e-13!115;CL:0000004!1.15e-13!115;CL:0000255!1.15e-13!115;CL:0000055!3.53e-13!50;CL:0002371!5.33e-13!118;CL:0002321!7.11e-13!70;CL:0000220!7.11e-13!70;CL:0002319!3.89e-12!43;CL:0000144!7.13e-12!121;CL:0000012!7.13e-12!121;CL:0000221!2.67e-11!44;CL:0000133!2.67e-11!44;CL:0000117!3.07e-10!23;CL:0000337!3.07e-10!23;CL:0000723!3.34e-10!91;CL:0000048!3.34e-10!91;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0000034!1.28e-09!97;CL:0000540!4.05e-09!33;CL:0000047!4.05e-09!33;CL:0000031!4.05e-09!33;CL:0000404!4.05e-09!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.77e-15,43;CL:0000221,1.37e-14,44;CL:0000133,1.37e-14,44;CL:0002321,2.90e-14,70;CL:0000117,2.44e-13,23;CL:0000337,2.44e-13,23;CL:0000540,1.49e-09,33;CL:0000047,1.49e-09,33;CL:0000031,1.49e-09,33;CL:0000404,1.49e-09,33;CL:0002453,1.66e-09,8;CL:0000393,9.79e-09,39;CL:0000211,9.79e-09,39;CL:0000723,4.78e-08,91;CL:0000048,4.78e-08,91;CL:0000128,1.58e-07,6;CL:0000126,1.58e-07,6;CL:0000127,1.58e-07,6;CL:0000034,1.62e-07,97;CL:0000333,3.57e-07,10;CL:0000095,3.57e-07,10;CL:0000243,3.57e-07,10;CL:0000123,3.57e-07,10;CL:0000125,3.57e-07,10;CL:0000030,3.57e-07,10;CL:0000339,3.57e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.55e-11!73;UBERON:0005743!1.55e-11!73;UBERON:0000073!1.04e-10!75;UBERON:0001016!1.04e-10!75;UBERON:0002020!1.76e-10!34;UBERON:0002791!2.29e-08!29;UBERON:0003528!2.29e-08!29;UBERON:0001893!2.29e-08!29;UBERON:0000025!3.93e-08!114;UBERON:0001049!1.24e-07!52;UBERON:0005068!1.24e-07!52;UBERON:0006241!1.24e-07!52;UBERON:0007135!1.24e-07!52;UBERON:0002616!4.67e-07!49;UBERON:0000955!6.45e-07!50;UBERON:0006238!6.45e-07!50 | |ontology_enrichment_uberon=UBERON:0001017!1.55e-11!73;UBERON:0005743!1.55e-11!73;UBERON:0000073!1.04e-10!75;UBERON:0001016!1.04e-10!75;UBERON:0002020!1.76e-10!34;UBERON:0002791!2.29e-08!29;UBERON:0003528!2.29e-08!29;UBERON:0001893!2.29e-08!29;UBERON:0000025!3.93e-08!114;UBERON:0001049!1.24e-07!52;UBERON:0005068!1.24e-07!52;UBERON:0006241!1.24e-07!52;UBERON:0007135!1.24e-07!52;UBERON:0002616!4.67e-07!49;UBERON:0000955!6.45e-07!50;UBERON:0006238!6.45e-07!50 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.62e-16,34;UBERON:0001017,1.63e-15,73;UBERON:0001016,9.27e-15,75;UBERON:0000073,3.11e-13,54;UBERON:0003528,7.03e-13,29;UBERON:0002791,7.03e-13,29;UBERON:0001893,7.03e-13,29;UBERON:0002619,1.69e-12,17;UBERON:0000025,5.22e-12,114;UBERON:0001049,3.51e-11,52;UBERON:0005068,3.51e-11,52;UBERON:0006241,3.51e-11,52;UBERON:0007135,3.51e-11,52;UBERON:0010314,6.11e-11,92;UBERON:0002021,1.57e-10,10;UBERON:0000411,1.57e-10,10;UBERON:0001950,1.57e-10,10;UBERON:0004111,2.86e-10,122;UBERON:0000956,3.11e-09,21;UBERON:0001869,3.11e-09,21;UBERON:0000203,3.11e-09,21;UBERON:0004121,4.32e-09,95;UBERON:0000924,4.32e-09,95;UBERON:0006601,4.32e-09,95;UBERON:0002616,5.08e-09,46;UBERON:0000955,1.13e-08,47;UBERON:0006238,1.13e-08,47;UBERON:0002780,1.14e-08,39;UBERON:0001890,1.14e-08,39;UBERON:0006240,1.14e-08,39;UBERON:0003080,2.72e-08,40;UBERON:0002346,3.33e-08,64;UBERON:0003075,3.33e-08,64;UBERON:0007284,3.33e-08,64 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.90739263392049,1.50268718983904,0.33575854382378,0.700837921786577,0,0.140788722151667,0.234064526321993,0.34243593645101,0.478632953972018,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,1.39912375625629,0.630924330716475,0.548457734422955,0,0.595303031057488,0.893618560807968,0.261199789138935,1.43993180514066,0.91763712426868,1.72269589234506,3.4460959692726,0.861884930743556,2.09025761402011,1.00812051903972,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.997407872150954,0,0,1.5626706890476,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,2.34717403304412,3.48840250208714,3.73466510648602,2.52758868796568,1.81982348112971,5.75010257459886,0.167782606057736,0.725362142011344,0.336093799142464,1.28629718017973,0.573066879877513,1.03134418455488,4.04632921719196,1.5869729378161,1.26766280701236,3.38844532069132,0.889294796111139,1.3498495759221,1.97773272513395,0,2.69640099466564,3.07374644257244,0.725827286159344,0.675029691658453,0.630974884054146,3.71346279724945,3.09215957332259,2.57230678351403,1.24599112323707,1.83843757322004,1.10115880999389,1.65993539510744,1.53606533256243,2.37395317914349,1.82975287204819,1.56274011167028,4.18774498502071,2.8138130501584,2.75036845998258,2.35702868378934,3.13217697758026,0.559198337475902,0.075726193333184,0.151143120213571,1.44932244350839,1.72084775396277,3.39985666853875,2.15881276655127,4.54843492213368,9.40856462904405,1.26399978118577,0.681721290312231,3.89679006904303,1.06001872353102,0,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,1.94112595522402,0,0,0.693941307064543,1.21786191324856,0,0.452167921657868,0.117588707135705,0.628332956648377,0,1.15679485535929,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,1.02182822083437,0.599075622529601,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,0.407357455401265,0.622034853050465,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0,0.512454881139399,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0,0,0,0,0.796137067273973,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.938104239924385,1.44049649168812,0.23674473558521,0.787056926989615,1.23413690309903,1.62773761325285,0.804820204198858,2.56883753207773,1.31647879930784,2.62667942526552,2.43206428637567,3.21639972335731,1.75640092232841,2.95254121272818,0,0,0.330418782983798,0.264450566663544,0.639864751605702,0,0,0.403367049246685,0,0,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,0.701358198903186,0.632365371242573,0.590440591918409,1.255989822731,1.97435462274881,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0.162135226775035,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,1.07638448113147,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0,0,3.26343410291226,0,0.551873492609465,0.481651769963376,1.17211686592203,0.655739781506702,1.26235463602186,0.631016438832513,1.56175497718655,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.361877549568935,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.836353184057875,0,0.134864346384821,0.165306911450672,0.523511883968059,0.518459893167171,0,1.12738587736838,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0,0.302478555410522,0.0974578807397524,0,0.233753804363138,0.453460767230423,0.443971906748129,0.807424709485281,1.67884616364078,0.386379188064381,0,0.73260649706906,0,0,1.6942555278512,5.9842280745933,2.86447756719698,1.71853182343688,4.11049511862385,1.5107877947794,4.05013500139084,1.35096360967266,5.89085131679466,1.55328093525546,0.31136204275253,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,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|phase1_expression=0.160148847104794,0.348975407639361,0.454999239389536,0.90739263392049,1.50268718983904,0.33575854382378,0.700837921786577,0,0.140788722151667,0.234064526321993,0.34243593645101,0.478632953972018,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,1.39912375625629,0.630924330716475,0.548457734422955,0,0.595303031057488,0.893618560807968,0.261199789138935,1.43993180514066,0.91763712426868,1.72269589234506,3.4460959692726,0.861884930743556,2.09025761402011,1.00812051903972,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.997407872150954,0,0,1.5626706890476,0,0,0,0,0.629484089877886,0.405507724878058,0.734187008646726,2.34717403304412,3.48840250208714,3.73466510648602,2.52758868796568,1.81982348112971,5.75010257459886,0.167782606057736,0.725362142011344,0.336093799142464,1.28629718017973,0.573066879877513,1.03134418455488,4.04632921719196,1.5869729378161,1.26766280701236,3.38844532069132,0.889294796111139,1.3498495759221,1.97773272513395,0,2.69640099466564,3.07374644257244,0.725827286159344,0.675029691658453,0.630974884054146,3.71346279724945,3.09215957332259,2.57230678351403,1.24599112323707,1.83843757322004,1.10115880999389,1.65993539510744,1.53606533256243,2.37395317914349,1.82975287204819,1.56274011167028,4.18774498502071,2.8138130501584,2.75036845998258,2.35702868378934,3.13217697758026,0.559198337475902,0.075726193333184,0.151143120213571,1.44932244350839,1.72084775396277,3.39985666853875,2.15881276655127,4.54843492213368,9.40856462904405,1.26399978118577,0.681721290312231,3.89679006904303,1.06001872353102,0,0,2.54805239706646,0,0,0.253359865475099,1.01104889002957,1.94112595522402,0,0,0.693941307064543,1.21786191324856,0,0.452167921657868,0.117588707135705,0.628332956648377,0,1.15679485535929,0,0,0.220841518460394,0.969750506270444,0,0,0.209446706813455,1.02182822083437,0.599075622529601,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0.41557608911912,0.162241263067758,0.407357455401265,0.622034853050465,0.758168275301024,0.420883711772948,0,0.229902104433473,0.180062129805349,0.30140963567143,0,0.512454881139399,0.187403449119458,0.517406741478031,0,0.189106080167819,0.351902248327898,0,0,0,0,0.796137067273973,0.702213187313235,0.257347907114715,0.852490498186778,0.414251545071004,0.938104239924385,1.44049649168812,0.23674473558521,0.787056926989615,1.23413690309903,1.62773761325285,0.804820204198858,2.56883753207773,1.31647879930784,2.62667942526552,2.43206428637567,3.21639972335731,1.75640092232841,2.95254121272818,0,0,0.330418782983798,0.264450566663544,0.639864751605702,0,0,0.403367049246685,0,0,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.779856348476481,0.898819408654221,1.08069024937347,0.398282546508734,0.189667900953082,0.456994050438915,1.1270773567308,0.203651327845314,0.581857461502877,0.701358198903186,0.632365371242573,0.590440591918409,1.255989822731,1.97435462274881,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0.50925170356284,0,0.162135226775035,0,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,1.07638448113147,0,0,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.518054945597687,0,0,3.26343410291226,0,0.551873492609465,0.481651769963376,1.17211686592203,0.655739781506702,1.26235463602186,0.631016438832513,1.56175497718655,0.861693590931196,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,0.395287777946524,0.321321316421807,0.141940085208269,0.534196811001766,0.325773918707152,0.164970122972535,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.922305443831782,0,0.363533729477506,0,0,0,0,1.02131881726136,0.18006109403131,0.517434735131018,0.428674070063185,0.177340233642274,0.535106452806212,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0.484393280087717,0.361877549568935,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0,0,0.276399947608848,0,0.158167996790568,0.203319467126849,0.108005340821801,0.836353184057875,0,0.134864346384821,0.165306911450672,0.523511883968059,0.518459893167171,0,1.12738587736838,0,0.165458490457098,0,0.258319646955462,0.168956125490778,0.234714477291508,0,0.104859344425711,0,0.576060012515731,0,0.202725215290164,0.410843828659309,0,0.179026695667481,0,0.120195449519969,0,0,0,0.302478555410522,0.0974578807397524,0,0.233753804363138,0.453460767230423,0.443971906748129,0.807424709485281,1.67884616364078,0.386379188064381,0,0.73260649706906,0,0,1.6942555278512,5.9842280745933,2.86447756719698,1.71853182343688,4.11049511862385,1.5107877947794,4.05013500139084,1.35096360967266,5.89085131679466,1.55328093525546,0.31136204275253,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0,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| ||
|short_description=p3@Cox6c,p3@Gm6265 | |short_description=p3@Cox6c,p3@Gm6265 | ||
}} | }} |
Latest revision as of 17:57, 26 September 2015
Short description: | p3@Cox6c, p3@Gm6265 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Cox6c_5end, CAGE_peak_3_at_Gm6265_5end |
Coexpression cluster: | NA |
Association with transcript: | 352bp_to_ENSMUST00000153512_5end |
EntrezGene: | 12864,621837 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.77e-15 | 43 |
ectodermal cell | 1.37e-14 | 44 |
neurectodermal cell | 1.37e-14 | 44 |
embryonic cell | 2.90e-14 | 70 |
CNS neuron (sensu Vertebrata) | 2.44e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.44e-13 | 23 |
neuron | 1.49e-09 | 33 |
neuronal stem cell | 1.49e-09 | 33 |
neuroblast | 1.49e-09 | 33 |
electrically signaling cell | 1.49e-09 | 33 |
oligodendrocyte precursor cell | 1.66e-09 | 8 |
electrically responsive cell | 9.79e-09 | 39 |
electrically active cell | 9.79e-09 | 39 |
somatic stem cell | 4.78e-08 | 91 |
multi fate stem cell | 4.78e-08 | 91 |
oligodendrocyte | 1.58e-07 | 6 |
macroglial cell | 1.58e-07 | 6 |
astrocyte | 1.58e-07 | 6 |
stem cell | 1.62e-07 | 97 |
migratory neural crest cell | 3.57e-07 | 10 |
neuron associated cell | 3.57e-07 | 10 |
glial cell (sensu Vertebrata) | 3.57e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.57e-07 | 10 |
glial cell | 3.57e-07 | 10 |
glioblast | 3.57e-07 | 10 |
glioblast (sensu Vertebrata) | 3.57e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
gray matter | 6.62e-16 | 34 |
central nervous system | 1.63e-15 | 73 |
nervous system | 9.27e-15 | 75 |
regional part of nervous system | 3.11e-13 | 54 |
brain grey matter | 7.03e-13 | 29 |
regional part of telencephalon | 7.03e-13 | 29 |
telencephalon | 7.03e-13 | 29 |
regional part of cerebral cortex | 1.69e-12 | 17 |
tube | 5.22e-12 | 114 |
neural tube | 3.51e-11 | 52 |
neural rod | 3.51e-11 | 52 |
future spinal cord | 3.51e-11 | 52 |
neural keel | 3.51e-11 | 52 |
structure with developmental contribution from neural crest | 6.11e-11 | 92 |
occipital lobe | 1.57e-10 | 10 |
visual cortex | 1.57e-10 | 10 |
neocortex | 1.57e-10 | 10 |
anatomical conduit | 2.86e-10 | 122 |
cerebral cortex | 3.11e-09 | 21 |
cerebral hemisphere | 3.11e-09 | 21 |
pallium | 3.11e-09 | 21 |
ectoderm-derived structure | 4.32e-09 | 95 |
ectoderm | 4.32e-09 | 95 |
presumptive ectoderm | 4.32e-09 | 95 |
regional part of brain | 5.08e-09 | 46 |
brain | 1.13e-08 | 47 |
future brain | 1.13e-08 | 47 |
regional part of forebrain | 1.14e-08 | 39 |
forebrain | 1.14e-08 | 39 |
future forebrain | 1.14e-08 | 39 |
anterior neural tube | 2.72e-08 | 40 |
neurectoderm | 3.33e-08 | 64 |
neural plate | 3.33e-08 | 64 |
presumptive neural plate | 3.33e-08 | 64 |