Personal tools

FFCP PHASE1:Mm9::chr6:144996245..144996277,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=12035
|EntrezGene=12035
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=B2KFA9
|UniProt=B2KFA9
|association_with_transcript=-64bp_to_ENSMUST00000149769_5end
|association_with_transcript=-64bp_to_ENSMUST00000149769_5end
|cluster_id=chr6:144996245..144996277,-
|description=CAGE_peak_8_at_Bcat1_5end
|description=CAGE_peak_8_at_Bcat1_5end
|id=chr6:144996245..144996277,-
|id=chr6:144996245..144996277,-
|ontology_enrichment_celltype=CL:0000117!2.42e-17!23;CL:0000337!2.42e-17!23;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!2.60e-15!43;CL:0000393!1.79e-12!39;CL:0000211!1.79e-12!39;CL:0000055!1.30e-11!50
|ontology_enrichment_celltype=CL:0000117!2.42e-17!23;CL:0000337!2.42e-17!23;CL:0000540!1.98e-16!33;CL:0000047!1.98e-16!33;CL:0000031!1.98e-16!33;CL:0000404!1.98e-16!33;CL:0000221!2.11e-15!44;CL:0000133!2.11e-15!44;CL:0002319!2.60e-15!43;CL:0000393!1.79e-12!39;CL:0000211!1.79e-12!39;CL:0000055!1.30e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,1.46e-23,23;CL:0000337,1.46e-23,23;CL:0000540,4.89e-15,33;CL:0000047,4.89e-15,33;CL:0000031,4.89e-15,33;CL:0000404,4.89e-15,33;CL:0002319,2.83e-12,43;CL:0000221,8.58e-12,44;CL:0000133,8.58e-12,44;CL:0000393,1.96e-11,39;CL:0000211,1.96e-11,39;CL:0002609,1.86e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.52e-30!71;UBERON:0003075!1.52e-30!71;UBERON:0007284!1.52e-30!71;UBERON:0000073!1.63e-30!75;UBERON:0001016!1.63e-30!75;UBERON:0001017!2.96e-30!73;UBERON:0005743!2.96e-30!73;UBERON:0004121!3.05e-29!102;UBERON:0000924!3.05e-29!102;UBERON:0006601!3.05e-29!102;UBERON:0000033!8.77e-28!63;UBERON:0001049!3.16e-26!52;UBERON:0005068!3.16e-26!52;UBERON:0006241!3.16e-26!52;UBERON:0007135!3.16e-26!52;UBERON:0003056!6.10e-26!49;UBERON:0000955!1.86e-24!50;UBERON:0006238!1.86e-24!50;UBERON:0002616!1.00e-23!49;UBERON:0002020!1.44e-21!34;UBERON:0003080!3.35e-20!40;UBERON:0002780!1.11e-19!39;UBERON:0001890!1.11e-19!39;UBERON:0006240!1.11e-19!39;UBERON:0002791!3.29e-18!29;UBERON:0003528!3.29e-18!29;UBERON:0001893!3.29e-18!29;UBERON:0000153!1.94e-14!94;UBERON:0007811!2.25e-14!86;UBERON:0000956!6.55e-13!21;UBERON:0001869!6.55e-13!21;UBERON:0000203!6.55e-13!21;UBERON:0002619!7.09e-10!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.75e-37,64;UBERON:0003075,6.75e-37,64;UBERON:0007284,6.75e-37,64;UBERON:0000073,7.26e-34,54;UBERON:0001049,2.00e-32,52;UBERON:0005068,2.00e-32,52;UBERON:0006241,2.00e-32,52;UBERON:0007135,2.00e-32,52;UBERON:0003056,1.49e-30,49;UBERON:0010371,4.43e-30,73;UBERON:0001017,9.17e-30,73;UBERON:0002020,1.82e-29,34;UBERON:0004121,4.43e-29,95;UBERON:0000924,4.43e-29,95;UBERON:0006601,4.43e-29,95;UBERON:0001016,1.74e-28,75;UBERON:0000955,1.05e-27,47;UBERON:0006238,1.05e-27,47;UBERON:0002616,9.96e-27,46;UBERON:0003528,8.99e-25,29;UBERON:0002791,8.99e-25,29;UBERON:0001893,8.99e-25,29;UBERON:0003080,7.88e-24,40;UBERON:0002780,4.06e-23,39;UBERON:0001890,4.06e-23,39;UBERON:0006240,4.06e-23,39;UBERON:0010314,8.79e-23,92;UBERON:0000956,2.25e-17,21;UBERON:0001869,2.25e-17,21;UBERON:0000203,2.25e-17,21;UBERON:0002619,3.81e-13,17;UBERON:0000025,5.10e-09,114;UBERON:0003076,7.66e-09,12;UBERON:0003057,7.66e-09,12;UBERON:0002420,1.71e-08,8;UBERON:0007245,1.71e-08,8;UBERON:0010009,1.71e-08,8;UBERON:0010011,1.71e-08,8;UBERON:0000454,1.71e-08,8;UBERON:0004111,1.51e-07,122;UBERON:0002021,1.81e-07,10;UBERON:0000411,1.81e-07,10;UBERON:0001950,1.81e-07,10;UBERON:0000970,2.50e-07,9;UBERON:0000019,2.50e-07,9;UBERON:0000047,2.50e-07,9;UBERON:0010312,2.50e-07,9;UBERON:0004088,2.50e-07,9;UBERON:0002104,2.50e-07,9;UBERON:0001456,2.50e-07,9;UBERON:0003072,2.50e-07,9;UBERON:0004128,2.50e-07,9;UBERON:0003071,2.50e-07,9;UBERON:0001954,3.46e-07,7;UBERON:0003022,3.46e-07,7;UBERON:0002421,3.46e-07,7;UBERON:0000349,3.46e-07,7;UBERON:0002600,3.46e-07,7
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.55543919259427,0.55994568650145,0,0,0,0,0,0.286533439938757,0,8.6996078169627,11.6378015439847,9.50747105259269,0,0,0,0,0,0,0.384218305321555,14.4128561108784,16.0657066614712,17.8776217148675,2.85650984403804,2.42955395046775,9.92175473641128,12.0765293482978,10.1114066527102,2.20231761998777,1.91531007127782,2.61131106535614,10.4190167306853,8.59983849862651,10.4182674111352,2.79182999001381,1.68828783009504,2.75036845998258,3.24091444021034,3.27454865837937,8.01517617048792,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.904335843315735,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.09706895166752,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,2.28566849015516,2.27137768294861,0.101839363850316,0,0,1.05220927943237,5.85541993332167,2.98872735763515,6.84236093260327,4.67184935290717,5.17077393550092,8.07116437794554,6.55912071918102,0.517406741478031,1.5089759505299,1.13463648100692,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0,0,0,0.284163499395593,1.03562886267751,1.17263029990548,1.08037236876609,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.21962071731931,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.445597348164788,0.849229592366497,1.61924280669958,0.292255857911312,0.395287777946524,3.85585579706168,6.10342366395555,0.890328018336276,0,1.97964147567043,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,2.88097750450096,1.4229455216103,0.428674070063185,0,0.356737635204141,0.493647061806363,1.8267896946876,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44279178808428,3.84618410961257,0.214368379079066,0,1.12950368523413,2.76195141904306,1.71868654031819,2.57779773515531,2.05524755931193,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,1.55328093525546,3.94391920819871,3.59122386060928,2.39027048055788,0.486213434136588,0.838452650511929,0.551530525350042,1.55572709461131,0.618105171716683,0.962757628775446,1.51618327058278,2.28131369901216,1.13175804831646,1.31098110457835,1.40855335290712,1.32101578597911,0,1.27472758539341,1.73618298417335,3.70877310722976,2.50238164228475,0.342869252385415,0.70990322463735,0.953744759789284,0.726732083161643,1.78807822789128,1.26921911837515,0.548783918618318,1.57841826862706,1.22223702461276,2.24456908663095,0.949080144993393,1.77308068276014,1.63692417267876,1.08455788830176,1.15743966588685,2.74791635731741,1.63752125911786,0.214871054048298,0.57386499620653,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,1.31811709640683,1.55543919259427,0.55994568650145,0,0,0,0,0,0.286533439938757,0,8.6996078169627,11.6378015439847,9.50747105259269,0,0,0,0,0,0,0.384218305321555,14.4128561108784,16.0657066614712,17.8776217148675,2.85650984403804,2.42955395046775,9.92175473641128,12.0765293482978,10.1114066527102,2.20231761998777,1.91531007127782,2.61131106535614,10.4190167306853,8.59983849862651,10.4182674111352,2.79182999001381,1.68828783009504,2.75036845998258,3.24091444021034,3.27454865837937,8.01517617048792,0.227178579999552,0.755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0.867426633830679,0,0.230615497256059,0.904335843315735,0.470354828542819,0,0,0,0,0.161766849947409,0,0,0,1.75668478206928,2.09446706813455,0,0,0,0,2.09706895166752,2.28750301409313,5.02617408451458,2.43354048269187,1.27857728665165,2.28566849015516,2.27137768294861,0.101839363850316,0,0,1.05220927943237,5.85541993332167,2.98872735763515,6.84236093260327,4.67184935290717,5.17077393550092,8.07116437794554,6.55912071918102,0.517406741478031,1.5089759505299,1.13463648100692,0.703804496655795,0.657587197282725,0.556094498451196,0,0,0,0,0,0.284163499395593,1.03562886267751,1.17263029990548,1.08037236876609,0.473489471170421,0,0,0,0,0,0,0,0,0,0,0.134206418760372,1.89260953707715,7.61494131606705,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.342745537829186,0,0.407302655690628,0.193952487167626,0.210407459670956,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.17431533968259,4.21962071731931,0,0,0.315508219416257,0.390438744296638,0.861693590931196,0.238968797952552,0.445597348164788,0.849229592366497,1.61924280669958,0.292255857911312,0.395287777946524,3.85585579706168,6.10342366395555,0.890328018336276,0,1.97964147567043,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,2.88097750450096,1.4229455216103,0.428674070063185,0,0.356737635204141,0.493647061806363,1.8267896946876,0.23467170806371,0,0,0,0.161464426695906,0,0,0,0,2.96680483216816,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0.168956125490778,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44279178808428,3.84618410961257,0.214368379079066,0,1.12950368523413,2.76195141904306,1.71868654031819,2.57779773515531,2.05524755931193,2.2661816921691,2.70009000092722,1.80128481289688,1.81256963593682,1.55328093525546,3.94391920819871,3.59122386060928,2.39027048055788,0.486213434136588,0.838452650511929,0.551530525350042,1.55572709461131,0.618105171716683,0.962757628775446,1.51618327058278,2.28131369901216,1.13175804831646,1.31098110457835,1.40855335290712,1.32101578597911,0,1.27472758539341,1.73618298417335,3.70877310722976,2.50238164228475,0.342869252385415,0.70990322463735,0.953744759789284,0.726732083161643,1.78807822789128,1.26921911837515,0.548783918618318,1.57841826862706,1.22223702461276,2.24456908663095,0.949080144993393,1.77308068276014,1.63692417267876,1.08455788830176,1.15743966588685,2.74791635731741,1.63752125911786,0.214871054048298,0.57386499620653,0,0
|short_description=p8@Bcat1
|short_description=p8@Bcat1
}}
}}

Latest revision as of 21:52, 26 September 2015

Short description:p8@Bcat1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Bcat1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -64bp_to_ENSMUST00000149769_5end
EntrezGene:Bcat1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Bcat1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.31
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.56
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C38.70
Mouse Granule cells, donor2.CNhs12357.11731-123E311.64
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.41
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.88
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.92
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F212.08
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.42
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.60
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.02
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.76
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.76
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F15.03
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C65.86
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C96.84
eyeball, embryo E17.CNhs11023.1261-18D44.67
eyeball, neonate N00.CNhs11207.633-15C65.17
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G86.56
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A34.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I76.10
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G61.98
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E62.88
pituitary gland, embryo E13.CNhs11009.370-44C71.42
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F55.44
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.72
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.58
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I83.94
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.74
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm6.75e-3764
neural plate6.75e-3764
presumptive neural plate6.75e-3764
regional part of nervous system7.26e-3454
neural tube2.00e-3252
neural rod2.00e-3252
future spinal cord2.00e-3252
neural keel2.00e-3252
pre-chordal neural plate1.49e-3049
ecto-epithelium4.43e-3073
central nervous system9.17e-3073
gray matter1.82e-2934
ectoderm-derived structure4.43e-2995
ectoderm4.43e-2995
presumptive ectoderm4.43e-2995
nervous system1.74e-2875
brain1.05e-2747
future brain1.05e-2747
regional part of brain9.96e-2746
brain grey matter8.99e-2529
regional part of telencephalon8.99e-2529
telencephalon8.99e-2529
anterior neural tube7.88e-2440
regional part of forebrain4.06e-2339
forebrain4.06e-2339
future forebrain4.06e-2339
structure with developmental contribution from neural crest8.79e-2392
cerebral cortex2.25e-1721
cerebral hemisphere2.25e-1721
pallium2.25e-1721
regional part of cerebral cortex3.81e-1317
tube5.10e-09114
posterior neural tube7.66e-0912
chordal neural plate7.66e-0912
basal ganglion1.71e-088
nuclear complex of neuraxis1.71e-088
aggregate regional part of brain1.71e-088
collection of basal ganglia1.71e-088
cerebral subcortex1.71e-088
anatomical conduit1.51e-07122
occipital lobe1.81e-0710
visual cortex1.81e-0710
neocortex1.81e-0710
eye2.50e-079
camera-type eye2.50e-079
simple eye2.50e-079
immature eye2.50e-079
ocular region2.50e-079
visual system2.50e-079
face2.50e-079
optic cup2.50e-079
optic vesicle2.50e-079
eye primordium2.50e-079
Ammon's horn3.46e-077
lobe parts of cerebral cortex3.46e-077
hippocampal formation3.46e-077
limbic system3.46e-077
limbic lobe3.46e-077
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:144996245..144996277,-&oldid=4276321"