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FFCP PHASE1:Mm9::chr15:76352832..76352900,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=170729
|EntrezGene=170729
|HGNC=
|HGNC=
|MCL_coexpression_id=100
|TSSclassifier=NA
|UniProt=Q99M85
|UniProt=Q99M85
|association_with_transcript=-273bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|association_with_transcript=-273bp_to_ENSMUST00000096365,NM_130893,uc007wko.1_5end
|cluster_id=chr15:76352832..76352900,-
|description=CAGE_peak_1_at_Scrt1_5end
|description=CAGE_peak_1_at_Scrt1_5end
|id=chr15:76352832..76352900,-
|id=chr15:76352832..76352900,-
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!4.62e-16!23;CL:0000337!4.62e-16!23;CL:0000221!5.97e-13!44;CL:0000133!5.97e-13!44;CL:0002319!1.12e-12!43;CL:0000393!4.76e-12!39;CL:0000211!4.76e-12!39;CL:0000055!3.64e-09!50;CL:0002609!6.74e-07!6
|ontology_enrichment_celltype=CL:0000540!1.68e-16!33;CL:0000047!1.68e-16!33;CL:0000031!1.68e-16!33;CL:0000404!1.68e-16!33;CL:0000117!4.62e-16!23;CL:0000337!4.62e-16!23;CL:0000221!5.97e-13!44;CL:0000133!5.97e-13!44;CL:0002319!1.12e-12!43;CL:0000393!4.76e-12!39;CL:0000211!4.76e-12!39;CL:0000055!3.64e-09!50;CL:0002609!6.74e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000117,3.68e-20,23;CL:0000337,3.68e-20,23;CL:0000540,1.29e-14,33;CL:0000047,1.29e-14,33;CL:0000031,1.29e-14,33;CL:0000404,1.29e-14,33;CL:0000393,4.67e-11,39;CL:0000211,4.67e-11,39;CL:0000221,1.37e-09,44;CL:0000133,1.37e-09,44;CL:0002319,2.82e-09,43;CL:0002609,2.49e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.22e-34!71;UBERON:0003075!9.22e-34!71;UBERON:0007284!9.22e-34!71;UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0004121!8.11e-31!102;UBERON:0000924!8.11e-31!102;UBERON:0006601!8.11e-31!102;UBERON:0000073!3.12e-30!75;UBERON:0001016!3.12e-30!75;UBERON:0000033!2.67e-27!63;UBERON:0001049!7.88e-27!52;UBERON:0005068!7.88e-27!52;UBERON:0006241!7.88e-27!52;UBERON:0007135!7.88e-27!52;UBERON:0003056!1.82e-25!49;UBERON:0000955!3.38e-23!50;UBERON:0006238!3.38e-23!50;UBERON:0002616!1.91e-22!49;UBERON:0002020!1.16e-21!34;UBERON:0003080!1.61e-20!40;UBERON:0002780!3.46e-20!39;UBERON:0001890!3.46e-20!39;UBERON:0006240!3.46e-20!39;UBERON:0002791!1.19e-17!29;UBERON:0003528!1.19e-17!29;UBERON:0001893!1.19e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000956!7.71e-13!21;UBERON:0001869!7.71e-13!21;UBERON:0000203!7.71e-13!21;UBERON:0000153!3.18e-12!94;UBERON:0002619!1.21e-09!17;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!8.06e-07!12;UBERON:0003057!8.06e-07!12
|ontology_enrichment_uberon=UBERON:0002346!9.22e-34!71;UBERON:0003075!9.22e-34!71;UBERON:0007284!9.22e-34!71;UBERON:0001017!5.54e-31!73;UBERON:0005743!5.54e-31!73;UBERON:0004121!8.11e-31!102;UBERON:0000924!8.11e-31!102;UBERON:0006601!8.11e-31!102;UBERON:0000073!3.12e-30!75;UBERON:0001016!3.12e-30!75;UBERON:0000033!2.67e-27!63;UBERON:0001049!7.88e-27!52;UBERON:0005068!7.88e-27!52;UBERON:0006241!7.88e-27!52;UBERON:0007135!7.88e-27!52;UBERON:0003056!1.82e-25!49;UBERON:0000955!3.38e-23!50;UBERON:0006238!3.38e-23!50;UBERON:0002616!1.91e-22!49;UBERON:0002020!1.16e-21!34;UBERON:0003080!1.61e-20!40;UBERON:0002780!3.46e-20!39;UBERON:0001890!3.46e-20!39;UBERON:0006240!3.46e-20!39;UBERON:0002791!1.19e-17!29;UBERON:0003528!1.19e-17!29;UBERON:0001893!1.19e-17!29;UBERON:0007811!2.69e-15!86;UBERON:0000956!7.71e-13!21;UBERON:0001869!7.71e-13!21;UBERON:0000203!7.71e-13!21;UBERON:0000153!3.18e-12!94;UBERON:0002619!1.21e-09!17;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003076!8.06e-07!12;UBERON:0003057!8.06e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.43e-31,64;UBERON:0003075,1.43e-31,64;UBERON:0007284,1.43e-31,64;UBERON:0001049,1.56e-28,52;UBERON:0005068,1.56e-28,52;UBERON:0006241,1.56e-28,52;UBERON:0007135,1.56e-28,52;UBERON:0000073,1.82e-28,54;UBERON:0010371,1.57e-27,73;UBERON:0002020,1.75e-27,34;UBERON:0001017,8.00e-27,73;UBERON:0001016,1.26e-25,75;UBERON:0003056,1.30e-25,49;UBERON:0004121,3.14e-25,95;UBERON:0000924,3.14e-25,95;UBERON:0006601,3.14e-25,95;UBERON:0000955,9.63e-24,47;UBERON:0006238,9.63e-24,47;UBERON:0002616,7.77e-23,46;UBERON:0003528,2.22e-22,29;UBERON:0002791,2.22e-22,29;UBERON:0001893,2.22e-22,29;UBERON:0003080,1.15e-21,40;UBERON:0002780,3.08e-21,39;UBERON:0001890,3.08e-21,39;UBERON:0006240,3.08e-21,39;UBERON:0010314,6.07e-19,92;UBERON:0000956,2.91e-16,21;UBERON:0001869,2.91e-16,21;UBERON:0000203,2.91e-16,21;UBERON:0002619,3.43e-12,17;UBERON:0002021,2.31e-09,10;UBERON:0000411,2.31e-09,10;UBERON:0001950,2.31e-09,10;UBERON:0003076,2.69e-07,12;UBERON:0003057,2.69e-07,12;UBERON:0002420,3.03e-07,8;UBERON:0007245,3.03e-07,8;UBERON:0010009,3.03e-07,8;UBERON:0010011,3.03e-07,8;UBERON:0000454,3.03e-07,8;UBERON:0002240,6.82e-07,6;UBERON:0005174,6.82e-07,6;UBERON:0001137,6.82e-07,6
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,29.1335703637821,25.9205579843296,22.8179305262225,0,0,0,0,0,0.299600110518405,0.768436610643109,48.630428172676,55.2174287776615,51.1089656083858,12.5686433137674,10.6016899656774,48.9963196859816,48.7853447482823,35.8495326777908,0,4.72443150915195,3.5329502648936,30.7295050411352,23.9697626238313,21.3574481928272,1.3959149950069,1.68828783009504,1.68078072554491,12.6690291753677,9.681274294339,22.3679334990361,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,6.70229461803056,0,0,0,0,2.09706895166752,5.03250663100489,30.4083532113132,4.69325664519146,6.64860189058859,2.49345653471472,5.353961681236,0,0,0,0.420883711772948,0.650602214813519,3.21862946206862,5.76198815377118,7.68594570962147,7.96027040070536,9.86475646193343,7.02762934197966,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,26.1377715443382,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.04750385139728,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,2.37172666767914,8.67567554338879,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.29358683782755,0.214337035031592,0.532020700926821,1.96205699362278,1.48094118541909,0.913394847343798,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,13.8097570952153,20.0513429703789,8.76451229952807,3.42541259885321,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,4.65984280576638,2.69847103718859,9.17757208822371,3.58540572083682,4.86213434136588,4.19226325255965,4.22840069435032,4.4449345560323,2.47242068686673,4.1719497246936,4.54854981174835,2.5347929989024,2.45214243801899,2.24739617927718,3.39333307745807,3.79074095107048,4.76293691283074,4.98302601562879,3.8581844092741,3.70877310722976,3.53277408322554,4.11443102862498,3.19456451086807,3.33810665926249,2.61623549938191,3.29382831453657,2.70766745253365,3.29270351170991,1.31534855718921,3.80251518768413,1.12228454331548,3.08451047122853,3.25064791839359,1.22769312950907,3.25367366490529,2.89359916471712,12.2407183189594,3.04111090979031,3.65280791882107,0.191288332068843,0.441182838239031,0
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,0,29.1335703637821,25.9205579843296,22.8179305262225,0,0,0,0,0,0.299600110518405,0.768436610643109,48.630428172676,55.2174287776615,51.1089656083858,12.5686433137674,10.6016899656774,48.9963196859816,48.7853447482823,35.8495326777908,0,4.72443150915195,3.5329502648936,30.7295050411352,23.9697626238313,21.3574481928272,1.3959149950069,1.68828783009504,1.68078072554491,12.6690291753677,9.681274294339,22.3679334990361,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.346970653532272,1.21786191324856,0.230615497256059,0.301445281105245,0.352766121407114,0.125666591329675,0,0,0,0,0,0,0,4.68449275218475,6.70229461803056,0,0,0,0,2.09706895166752,5.03250663100489,30.4083532113132,4.69325664519146,6.64860189058859,2.49345653471472,5.353961681236,0,0,0,0.420883711772948,0.650602214813519,3.21862946206862,5.76198815377118,7.68594570962147,7.96027040070536,9.86475646193343,7.02762934197966,2.84573707812917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83666881697493,26.1377715443382,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0,0.329397909448022,0,0,0,0,0,0,0,0.342745537829186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37156238974363,3.04750385139728,0,0,0.631016438832513,0.390438744296638,1.07711698866399,0,0.668396022247182,0.566153061577665,0.404810701674894,0.584511715822624,2.37172666767914,8.67567554338879,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,1.26042765821917,1.29358683782755,0.214337035031592,0.532020700926821,1.96205699362278,1.48094118541909,0.913394847343798,0,0,0,0,0,0,0,0,0,3.8939313422207,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.218362563746178,0.269728692769641,0,0,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0,0,0.483168241652012,0.288030006257865,0,0.810900861160657,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0720589637461,13.8097570952153,20.0513429703789,8.76451229952807,3.42541259885321,9.06472676867641,4.72515750162264,3.60256962579376,4.07828168085784,4.65984280576638,2.69847103718859,9.17757208822371,3.58540572083682,4.86213434136588,4.19226325255965,4.22840069435032,4.4449345560323,2.47242068686673,4.1719497246936,4.54854981174835,2.5347929989024,2.45214243801899,2.24739617927718,3.39333307745807,3.79074095107048,4.76293691283074,4.98302601562879,3.8581844092741,3.70877310722976,3.53277408322554,4.11443102862498,3.19456451086807,3.33810665926249,2.61623549938191,3.29382831453657,2.70766745253365,3.29270351170991,1.31534855718921,3.80251518768413,1.12228454331548,3.08451047122853,3.25064791839359,1.22769312950907,3.25367366490529,2.89359916471712,12.2407183189594,3.04111090979031,3.65280791882107,0.191288332068843,0.441182838239031,0
|short_description=p1@Scrt1
|short_description=p1@Scrt1
}}
}}

Latest revision as of 00:51, 27 September 2015

Short description:p1@Scrt1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scrt1_5end
Coexpression cluster:MCL_coexpression_mm9:100
Association with transcript: -273bp_to_ENSMUST00000096365, NM_130893, uc007wko.1_5end
EntrezGene:Scrt1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scrt1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C329.13
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C722.82
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D548.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F555.22
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D951.11
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F112.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.60
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D249.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F248.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D635.85
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D430.73
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F423.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D821.36
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.68
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I26.70
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.10
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F130.41
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B25.35
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E23.22
eyeball, embryo E15.CNhs10593.426-16C95.76
eyeball, embryo E17.CNhs11023.1261-18D47.69
eyeball, neonate N00.CNhs11207.633-15C67.96
eyeball, neonate N01.CNhs11140.1532-43E79.86
eyeball, neonate N02.CNhs11205.1551-44G87.03
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.84
hippocampus, neonate N00.CNhs11228.627-43G126.14
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I98.68
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.26
pituitary gland, embryo E13.CNhs11009.370-44C71.29
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.96
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.89
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A118.07
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A213.81
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I82.70
whole body, embryo E12.CNhs10587.857-27C99.18
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.17
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.55
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.79
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G54.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.86
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.71
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.25
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B33.04
whole body, neonate N00.CNhs10525.657-19C23.65
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm1.43e-3164
neural plate1.43e-3164
presumptive neural plate1.43e-3164
neural tube1.56e-2852
neural rod1.56e-2852
future spinal cord1.56e-2852
neural keel1.56e-2852
regional part of nervous system1.82e-2854
ecto-epithelium1.57e-2773
gray matter1.75e-2734
central nervous system8.00e-2773
nervous system1.26e-2575
pre-chordal neural plate1.30e-2549
ectoderm-derived structure3.14e-2595
ectoderm3.14e-2595
presumptive ectoderm3.14e-2595
brain9.63e-2447
future brain9.63e-2447
regional part of brain7.77e-2346
brain grey matter2.22e-2229
regional part of telencephalon2.22e-2229
telencephalon2.22e-2229
anterior neural tube1.15e-2140
regional part of forebrain3.08e-2139
forebrain3.08e-2139
future forebrain3.08e-2139
structure with developmental contribution from neural crest6.07e-1992
cerebral cortex2.91e-1621
cerebral hemisphere2.91e-1621
pallium2.91e-1621
regional part of cerebral cortex3.43e-1217
occipital lobe2.31e-0910
visual cortex2.31e-0910
neocortex2.31e-0910
posterior neural tube2.69e-0712
chordal neural plate2.69e-0712
basal ganglion3.03e-078
nuclear complex of neuraxis3.03e-078
aggregate regional part of brain3.03e-078
collection of basal ganglia3.03e-078
cerebral subcortex3.03e-078
spinal cord6.82e-076
dorsal region element6.82e-076
dorsum6.82e-076
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