FFCP PHASE1:Mm9::chr1:25886902..25886922,-: Difference between revisions
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{{FFCP|EntrezGene=210933|HGNC=|MCL_coexpression_id=1|UniProt=G3XA05,Q6ZQ96,Q8BJ13,Q8K0A3|association_with_transcript=-350bp_to_ENSMUST00000151309,NM_175642,uc011wis.1_5end|description=CAGE_peak_3_at_Bai3_5end|id=chr1:25886902..25886922,-|ontology_enrichment_celltype=CL:0000117!1.89e-13!23;CL:0000337!1.89e-13!23;CL:0000540!2.26e-13!33;CL:0000047!2.26e-13!33;CL:0000031!2.26e-13!33;CL:0000404!2.26e-13!33;CL:0002319!7.02e-12!43;CL:0000221!2.86e-11!44;CL:0000133!2.86e-11!44;CL:0000393!2.65e-09!39;CL:0000211!2.65e-09!39;CL:0000055!3.13e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-17,23;CL:0000337,3.10e-17,23;CL:0000540,8.06e-12,33;CL:0000047,8.06e-12,33;CL:0000031,8.06e-12,33;CL:0000404,8.06e-12,33;CL:0000393,7.23e-09,39;CL:0000211,7.23e-09,39;CL:0002319,4.71e-08,43;CL:0000221,1.04e-07,44;CL:0000133,1.04e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0002346!2.82e-32!71;UBERON:0003075!2.82e-32!71;UBERON:0007284!2.82e-32!71;UBERON:0000073!9.99e-32!75;UBERON:0001016!9.99e-32!75;UBERON:0004121!2.02e-30!102;UBERON:0000924!2.02e-30!102;UBERON:0006601!2.02e-30!102;UBERON:0000033!2.33e-29!63;UBERON:0001049!9.44e-28!52;UBERON:0005068!9.44e-28!52;UBERON:0006241!9.44e-28!52;UBERON:0007135!9.44e-28!52;UBERON:0000955!2.42e-26!50;UBERON:0006238!2.42e-26!50;UBERON:0003056!9.14e-26!49;UBERON:0002616!1.15e-25!49;UBERON:0003080!4.64e-21!40;UBERON:0002020!1.36e-20!34;UBERON:0002780!2.89e-20!39;UBERON:0001890!2.89e-20!39;UBERON:0006240!2.89e-20!39;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0007811!1.25e-14!86;UBERON:0000153!5.94e-14!94;UBERON:0000956!2.37e-12!21;UBERON:0001869!2.37e-12!21;UBERON:0000203!2.37e-12!21;UBERON:0002619!1.03e-10!17;UBERON:0002021!5.07e-09!10;UBERON:0000411!5.07e-09!10;UBERON:0001950!5.07e-09!10;UBERON:0003076!3.73e-07!12;UBERON:0003057!3.73e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.23e-36,64;UBERON:0003075,4.23e-36,64;UBERON:0007284,4.23e-36,64;UBERON:0000073,1.89e-33,54;UBERON:0001049,2.37e-31,52;UBERON:0005068,2.37e-31,52;UBERON:0006241,2.37e-31,52;UBERON:0007135,2.37e-31,52;UBERON:0001017,5.09e-30,73;UBERON:0010371,2.34e-29,73;UBERON:0001016,1.00e-28,75;UBERON:0004121,2.83e-28,95;UBERON:0000924,2.83e-28,95;UBERON:0006601,2.83e-28,95;UBERON:0003056,3.46e-27,49;UBERON:0000955,2.14e-26,47;UBERON:0006238,2.14e-26,47;UBERON:0002616,1.68e-25,46;UBERON:0002020,4.28e-25,34;UBERON:0003080,8.24e-22,40;UBERON:0010314,1.17e-21,92;UBERON:0002780,9.16e-21,39;UBERON:0001890,9.16e-21,39;UBERON:0006240,9.16e-21,39;UBERON:0003528,2.17e-20,29;UBERON:0002791,2.17e-20,29;UBERON:0001893,2.17e-20,29;UBERON:0000956,1.38e-13,21;UBERON:0001869,1.38e-13,21;UBERON:0000203,1.38e-13,21;UBERON:0002021,3.19e-12,10;UBERON:0000411,3.19e-12,10;UBERON:0001950,3.19e-12,10;UBERON:0002619,3.20e-11,17;UBERON:0003076,6.29e-10,12;UBERON:0003057,6.29e-10,12;UBERON:0002420,4.31e-08,8;UBERON:0007245,4.31e-08,8;UBERON:0010009,4.31e-08,8;UBERON:0010011,4.31e-08,8;UBERON:0000454,4.31e-08,8;UBERON:0002240,7.10e-07,6;UBERON:0005174,7.10e-07,6;UBERON:0001137,7.10e-07,6|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,3.1739458756322,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,1.24427534770173,1.21505344498522,1.68259969081106,4.28476476605705,4.41737081903227,1.95985278743926,1.15014565221884,0.919218786610021,14.3150645299205,5.49055553766307,6.60508093001847,4.48413378282659,3.01909223887952,6.77187381723788,3.35019598801657,4.50210088025344,3.81995619442025,10.0173719061047,8.54230084794618,6.52398060388552,0,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.913396434936424,0.461230994512117,1.50722640552623,2.11659672844269,0,0,0,0,0,0,0,0,22.5441213698891,17.5935233723302,0,0,0,0,13.3313669070292,14.1825186873774,2.51308704225729,12.3415267336516,15.8543583544805,9.55825004973976,6.81413304884582,0.509196819251581,0.124406970610093,0,2.73574412652416,1.69156575851515,0.689706313300419,1.98068342785884,3.0140963567143,2.24520447199382,2.43416068541215,2.90475346135159,5.69147415625834,0.215567992932842,0.378212160335639,0.351902248327898,0,1.39023624612799,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.88362758251398,2.88132914661996,0,0,0.639864751605702,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.86697890940181,6.44664276257117,0,0,0.94652465824877,1.56175497718655,0,0.238968797952552,0.6683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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=210933 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=G3XA05,Q6ZQ96,Q8BJ13,Q8K0A3 | |||
|association_with_transcript=-350bp_to_ENSMUST00000151309,NM_175642,uc011wis.1_5end | |||
|cluster_id=chr1:25886902..25886922,- | |||
|description=CAGE_peak_3_at_Bai3_5end | |||
|id=chr1:25886902..25886922,- | |||
|ontology_enrichment_celltype=CL:0000117!1.89e-13!23;CL:0000337!1.89e-13!23;CL:0000540!2.26e-13!33;CL:0000047!2.26e-13!33;CL:0000031!2.26e-13!33;CL:0000404!2.26e-13!33;CL:0002319!7.02e-12!43;CL:0000221!2.86e-11!44;CL:0000133!2.86e-11!44;CL:0000393!2.65e-09!39;CL:0000211!2.65e-09!39;CL:0000055!3.13e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.10e-17,23;CL:0000337,3.10e-17,23;CL:0000540,8.06e-12,33;CL:0000047,8.06e-12,33;CL:0000031,8.06e-12,33;CL:0000404,8.06e-12,33;CL:0000393,7.23e-09,39;CL:0000211,7.23e-09,39;CL:0002319,4.71e-08,43;CL:0000221,1.04e-07,44;CL:0000133,1.04e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0002346!2.82e-32!71;UBERON:0003075!2.82e-32!71;UBERON:0007284!2.82e-32!71;UBERON:0000073!9.99e-32!75;UBERON:0001016!9.99e-32!75;UBERON:0004121!2.02e-30!102;UBERON:0000924!2.02e-30!102;UBERON:0006601!2.02e-30!102;UBERON:0000033!2.33e-29!63;UBERON:0001049!9.44e-28!52;UBERON:0005068!9.44e-28!52;UBERON:0006241!9.44e-28!52;UBERON:0007135!9.44e-28!52;UBERON:0000955!2.42e-26!50;UBERON:0006238!2.42e-26!50;UBERON:0003056!9.14e-26!49;UBERON:0002616!1.15e-25!49;UBERON:0003080!4.64e-21!40;UBERON:0002020!1.36e-20!34;UBERON:0002780!2.89e-20!39;UBERON:0001890!2.89e-20!39;UBERON:0006240!2.89e-20!39;UBERON:0002791!3.12e-17!29;UBERON:0003528!3.12e-17!29;UBERON:0001893!3.12e-17!29;UBERON:0007811!1.25e-14!86;UBERON:0000153!5.94e-14!94;UBERON:0000956!2.37e-12!21;UBERON:0001869!2.37e-12!21;UBERON:0000203!2.37e-12!21;UBERON:0002619!1.03e-10!17;UBERON:0002021!5.07e-09!10;UBERON:0000411!5.07e-09!10;UBERON:0001950!5.07e-09!10;UBERON:0003076!3.73e-07!12;UBERON:0003057!3.73e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.23e-36,64;UBERON:0003075,4.23e-36,64;UBERON:0007284,4.23e-36,64;UBERON:0000073,1.89e-33,54;UBERON:0001049,2.37e-31,52;UBERON:0005068,2.37e-31,52;UBERON:0006241,2.37e-31,52;UBERON:0007135,2.37e-31,52;UBERON:0001017,5.09e-30,73;UBERON:0010371,2.34e-29,73;UBERON:0001016,1.00e-28,75;UBERON:0004121,2.83e-28,95;UBERON:0000924,2.83e-28,95;UBERON:0006601,2.83e-28,95;UBERON:0003056,3.46e-27,49;UBERON:0000955,2.14e-26,47;UBERON:0006238,2.14e-26,47;UBERON:0002616,1.68e-25,46;UBERON:0002020,4.28e-25,34;UBERON:0003080,8.24e-22,40;UBERON:0010314,1.17e-21,92;UBERON:0002780,9.16e-21,39;UBERON:0001890,9.16e-21,39;UBERON:0006240,9.16e-21,39;UBERON:0003528,2.17e-20,29;UBERON:0002791,2.17e-20,29;UBERON:0001893,2.17e-20,29;UBERON:0000956,1.38e-13,21;UBERON:0001869,1.38e-13,21;UBERON:0000203,1.38e-13,21;UBERON:0002021,3.19e-12,10;UBERON:0000411,3.19e-12,10;UBERON:0001950,3.19e-12,10;UBERON:0002619,3.20e-11,17;UBERON:0003076,6.29e-10,12;UBERON:0003057,6.29e-10,12;UBERON:0002420,4.31e-08,8;UBERON:0007245,4.31e-08,8;UBERON:0010009,4.31e-08,8;UBERON:0010011,4.31e-08,8;UBERON:0000454,4.31e-08,8;UBERON:0002240,7.10e-07,6;UBERON:0005174,7.10e-07,6;UBERON:0001137,7.10e-07,6 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,5.46254444320914,3.1739458756322,7.60597684207415,0.338844532069132,0,0,0,0,0.599200221036809,0.384218305321555,1.24427534770173,1.21505344498522,1.68259969081106,4.28476476605705,4.41737081903227,1.95985278743926,1.15014565221884,0.919218786610021,14.3150645299205,5.49055553766307,6.60508093001847,4.48413378282659,3.01909223887952,6.77187381723788,3.35019598801657,4.50210088025344,3.81995619442025,10.0173719061047,8.54230084794618,6.52398060388552,0,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.867426633830679,0.913396434936424,0.461230994512117,1.50722640552623,2.11659672844269,0,0,0,0,0,0,0,0,22.5441213698891,17.5935233723302,0,0,0,0,13.3313669070292,14.1825186873774,2.51308704225729,12.3415267336516,15.8543583544805,9.55825004973976,6.81413304884582,0.509196819251581,0.124406970610093,0,2.73574412652416,1.69156575851515,0.689706313300419,1.98068342785884,3.0140963567143,2.24520447199382,2.43416068541215,2.90475346135159,5.69147415625834,0.215567992932842,0.378212160335639,0.351902248327898,0,1.39023624612799,0.348252166522167,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.88362758251398,2.88132914661996,0,0,0.639864751605702,0,0.38660238396628,0.403367049246685,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0,0,0,0.216138049874694,0,0,0.342745537829186,0,0.203651327845314,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0.162964976442026,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,7.86697890940181,6.44664276257117,0,0,0.94652465824877,1.56175497718655,0,0.238968797952552,0.668396022247182,0.566153061577665,0.404810701674894,1.16902343164525,0.395287777946524,4.4984984299053,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0.485561272309963,0.302323556964751,0.188605079755898,0,0.307435147943927,0.775284879504663,0,0,0,0,0,0.680879211507576,3.06103859853227,1.03486947026204,0.428674070063185,1.59606210278046,0.535106452806212,1.15184314421485,0.608929898229199,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,8.34413859047294,0,1.23832120777933,0.925972636848558,0.376736914009382,0,0.228778173206523,0,0,0,0.954670618015114,0.474503990371703,0.406638934253697,0.324016022465404,0.418176592028937,0.436725127492355,0,0.330613822901344,0,0,0,0.56369293868419,0,0,0.777804753376191,0,1.520605129417,0.821500670520278,0.2604087696879,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0.73260649706906,0,0,13.5540442228096,18.8733346967943,16.6139698897425,19.5912627871804,11.6464028361009,12.8416962556249,14.8504950050997,10.8077088773813,12.2348450425735,8.80192529978094,0.415149390336707,0.399024873401031,1.87806966329548,1.70174701947806,0,0.919217542250071,1.11123363900808,1.23621034343337,2.56735367673452,1.51618327058278,1.2673964994512,2.07488975524684,1.21733959710847,1.47257850531199,1.43588672389033,0,1.0429589335037,1.35036454324594,1.64834360321323,1.47198920134397,1.02860775715625,1.4198064492747,1.43061713968393,1.59881058295561,1.50575008664529,1.4384483341585,1.46342378298218,1.31534855718921,2.03706170768793,1.12228454331548,1.66089025373844,1.37906275325789,0.818462086339379,1.39443157067369,0.964533054905707,1.49886346762768,1.16965804222704,1.07435527024149,0.191288332068843,0,0 | |||
|short_description=p3@Bai3 | |||
}} |
Latest revision as of 01:29, 27 September 2015
Short description: | p3@Bai3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bai3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -350bp_to_ENSMUST00000151309, NM_175642, uc011wis.1_5end |
EntrezGene: | Bai3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.10e-17 | 23 |
neuroblast (sensu Vertebrata) | 3.10e-17 | 23 |
neuron | 8.06e-12 | 33 |
neuronal stem cell | 8.06e-12 | 33 |
neuroblast | 8.06e-12 | 33 |
electrically signaling cell | 8.06e-12 | 33 |
electrically responsive cell | 7.23e-09 | 39 |
electrically active cell | 7.23e-09 | 39 |
neural cell | 4.71e-08 | 43 |
ectodermal cell | 1.04e-07 | 44 |
neurectodermal cell | 1.04e-07 | 44 |