FFCP PHASE1:Mm9::chr15:80004072..80004113,+: Difference between revisions
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{{FFCP|EntrezGene=17309|HGNC=|UniProt=Q5RKT9|association_with_transcript=-37bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end|description=CAGE_peak_5_at_Mgat3_5end|id=chr15:80004072..80004113,+|ontology_enrichment_celltype=CL:0000221!3.06e-14!44;CL:0000133!3.06e-14!44;CL:0002319!7.57e-14!43;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000055!2.82e-12!50;CL:0000393!1.99e-11!39;CL:0000211!1.99e-11!39;CL:0000117!1.73e-10!23;CL:0000337!1.73e-10!23;CL:0002321!1.69e-08!70;CL:0000220!1.69e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-17,44;CL:0000133,3.23e-17,44;CL:0002319,1.10e-16,43;CL:0000540,6.33e-15,33;CL:0000047,6.33e-15,33;CL:0000031,6.33e-15,33;CL:0000404,6.33e-15,33;CL:0000393,2.14e-13,39;CL:0000211,2.14e-13,39;CL:0000117,2.64e-12,23;CL:0000337,2.64e-12,23;CL:0002321,9.79e-12,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.15e-28!75;UBERON:0001016!2.15e-28!75;UBERON:0001017!1.71e-27!73;UBERON:0005743!1.71e-27!73;UBERON:0004121!4.52e-26!102;UBERON:0000924!4.52e-26!102;UBERON:0006601!4.52e-26!102;UBERON:0002346!7.02e-21!71;UBERON:0003075!7.02e-21!71;UBERON:0007284!7.02e-21!71;UBERON:0000033!2.37e-20!63;UBERON:0001049!4.04e-20!52;UBERON:0005068!4.04e-20!52;UBERON:0006241!4.04e-20!52;UBERON:0007135!4.04e-20!52;UBERON:0000955!4.58e-19!50;UBERON:0006238!4.58e-19!50;UBERON:0002616!2.16e-18!49;UBERON:0002020!4.56e-15!34;UBERON:0003056!1.16e-14!49;UBERON:0003080!1.10e-13!40;UBERON:0002780!3.67e-13!39;UBERON:0001890!3.67e-13!39;UBERON:0006240!3.67e-13!39;UBERON:0007811!6.06e-13!86;UBERON:0002791!3.51e-12!29;UBERON:0003528!3.51e-12!29;UBERON:0001893!3.51e-12!29;UBERON:0000153!4.75e-12!94;UBERON:0000956!7.52e-09!21;UBERON:0001869!7.52e-09!21;UBERON:0000203!7.52e-09!21;UBERON:0003076!2.27e-07!12;UBERON:0003057!2.27e-07!12;UBERON:0002619!3.19e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.98e-36,75;UBERON:0001017,1.35e-34,73;UBERON:0004121,1.59e-29,95;UBERON:0000924,1.59e-29,95;UBERON:0006601,1.59e-29,95;UBERON:0000073,9.18e-26,54;UBERON:0001049,5.71e-24,52;UBERON:0005068,5.71e-24,52;UBERON:0006241,5.71e-24,52;UBERON:0007135,5.71e-24,52;UBERON:0002346,2.34e-23,64;UBERON:0003075,2.34e-23,64;UBERON:0007284,2.34e-23,64;UBERON:0010371,5.15e-20,73;UBERON:0000955,6.38e-20,47;UBERON:0006238,6.38e-20,47;UBERON:0002616,4.69e-19,46;UBERON:0002020,4.80e-18,34;UBERON:0003080,7.51e-16,40;UBERON:0003056,1.53e-15,49;UBERON:0002780,3.72e-15,39;UBERON:0001890,3.72e-15,39;UBERON:0006240,3.72e-15,39;UBERON:0011216,6.80e-15,194;UBERON:0003528,3.61e-14,29;UBERON:0002791,3.61e-14,29;UBERON:0001893,3.61e-14,29;UBERON:0010314,9.58e-14,92;UBERON:0000956,1.13e-09,21;UBERON:0001869,1.13e-09,21;UBERON:0000203,1.13e-09,21;UBERON:0003076,5.20e-09,12;UBERON:0003057,5.20e-09,12;UBERON:0002021,1.29e-08,10;UBERON:0000411,1.29e-08,10;UBERON:0001950,1.29e-08,10;UBERON:0004111,1.66e-07,122;UBERON:0002619,1.67e-07,17;UBERON:0000025,3.52e-07,114|phase1_expression=1.44133962394315,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.7008658030214,0,0,0,0,0,0,0.215471232685889,0.760093677825496,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,1.10128051297009,3.9119567217402,0.65407546914134,0.659058548203415,1.74986909166855,1.25987779462826,0,0,0,0,0.514518872071894,0.85960031981627,0,3.23706337375356,3.1739458756322,2.53532561402472,3.04960078862219,4.4464739805557,0.449949858640699,0.988866362566974,0.7104801149461,5.69240209984969,7.68436610643109,2.59224030771194,1.89008313664367,2.73422449756797,5.42736870367227,5.74258206474195,0.857435594504678,1.43768206527355,0.919218786610021,5.50579404996943,8.17198963745201,6.29786786350598,1.05509030184155,1.46380229763855,1.56274011167028,8.65467296904281,5.06486349028512,5.19514042441154,6.48182888042069,4.41352210477219,4.10078780815661,1.59025005999687,3.09843396437821,0.579728977403356,0,0,0,0,0,0.421333260395256,0.511290967734173,0.779358013808606,0.70667914902068,2.25349471642689,1.28326477414318,5.09610479413291,0,6.49473123033642,5.32055717497707,8.08839112023653,0.79928715803342,0,0.890652834388949,0.867426633830679,1.21786191324856,0.230615497256059,1.20578112442098,1.29347577849275,0.753999547978053,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0,1.86391761218122,3.80615036115011,9.21565509979202,0.255457055208591,0,0,0,4.49371918214468,5.49000723382352,3.39266750704734,5.04090528557602,5.37002460393694,6.2336413367868,5.02947915510049,0.712875546952214,0.622034853050465,0.252722758433675,1.05220927943237,0.780722657776222,1.37941262660084,0.900310649026746,1.50704817835715,1.08858398642125,1.15302348256365,2.06143794031403,0.776110112217047,0.431135985865684,0.945530400839096,0.703804496655795,0.876782929710299,1.39023624612799,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,0,0.234526059981096,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17309 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q5RKT9 | |||
|association_with_transcript=-37bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | |||
|cluster_id=chr15:80004072..80004113,+ | |||
|description=CAGE_peak_5_at_Mgat3_5end | |||
|id=chr15:80004072..80004113,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.06e-14!44;CL:0000133!3.06e-14!44;CL:0002319!7.57e-14!43;CL:0000540!2.36e-12!33;CL:0000047!2.36e-12!33;CL:0000031!2.36e-12!33;CL:0000404!2.36e-12!33;CL:0000055!2.82e-12!50;CL:0000393!1.99e-11!39;CL:0000211!1.99e-11!39;CL:0000117!1.73e-10!23;CL:0000337!1.73e-10!23;CL:0002321!1.69e-08!70;CL:0000220!1.69e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.23e-17,44;CL:0000133,3.23e-17,44;CL:0002319,1.10e-16,43;CL:0000540,6.33e-15,33;CL:0000047,6.33e-15,33;CL:0000031,6.33e-15,33;CL:0000404,6.33e-15,33;CL:0000393,2.14e-13,39;CL:0000211,2.14e-13,39;CL:0000117,2.64e-12,23;CL:0000337,2.64e-12,23;CL:0002321,9.79e-12,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.15e-28!75;UBERON:0001016!2.15e-28!75;UBERON:0001017!1.71e-27!73;UBERON:0005743!1.71e-27!73;UBERON:0004121!4.52e-26!102;UBERON:0000924!4.52e-26!102;UBERON:0006601!4.52e-26!102;UBERON:0002346!7.02e-21!71;UBERON:0003075!7.02e-21!71;UBERON:0007284!7.02e-21!71;UBERON:0000033!2.37e-20!63;UBERON:0001049!4.04e-20!52;UBERON:0005068!4.04e-20!52;UBERON:0006241!4.04e-20!52;UBERON:0007135!4.04e-20!52;UBERON:0000955!4.58e-19!50;UBERON:0006238!4.58e-19!50;UBERON:0002616!2.16e-18!49;UBERON:0002020!4.56e-15!34;UBERON:0003056!1.16e-14!49;UBERON:0003080!1.10e-13!40;UBERON:0002780!3.67e-13!39;UBERON:0001890!3.67e-13!39;UBERON:0006240!3.67e-13!39;UBERON:0007811!6.06e-13!86;UBERON:0002791!3.51e-12!29;UBERON:0003528!3.51e-12!29;UBERON:0001893!3.51e-12!29;UBERON:0000153!4.75e-12!94;UBERON:0000956!7.52e-09!21;UBERON:0001869!7.52e-09!21;UBERON:0000203!7.52e-09!21;UBERON:0003076!2.27e-07!12;UBERON:0003057!2.27e-07!12;UBERON:0002619!3.19e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.98e-36,75;UBERON:0001017,1.35e-34,73;UBERON:0004121,1.59e-29,95;UBERON:0000924,1.59e-29,95;UBERON:0006601,1.59e-29,95;UBERON:0000073,9.18e-26,54;UBERON:0001049,5.71e-24,52;UBERON:0005068,5.71e-24,52;UBERON:0006241,5.71e-24,52;UBERON:0007135,5.71e-24,52;UBERON:0002346,2.34e-23,64;UBERON:0003075,2.34e-23,64;UBERON:0007284,2.34e-23,64;UBERON:0010371,5.15e-20,73;UBERON:0000955,6.38e-20,47;UBERON:0006238,6.38e-20,47;UBERON:0002616,4.69e-19,46;UBERON:0002020,4.80e-18,34;UBERON:0003080,7.51e-16,40;UBERON:0003056,1.53e-15,49;UBERON:0002780,3.72e-15,39;UBERON:0001890,3.72e-15,39;UBERON:0006240,3.72e-15,39;UBERON:0011216,6.80e-15,194;UBERON:0003528,3.61e-14,29;UBERON:0002791,3.61e-14,29;UBERON:0001893,3.61e-14,29;UBERON:0010314,9.58e-14,92;UBERON:0000956,1.13e-09,21;UBERON:0001869,1.13e-09,21;UBERON:0000203,1.13e-09,21;UBERON:0003076,5.20e-09,12;UBERON:0003057,5.20e-09,12;UBERON:0002021,1.29e-08,10;UBERON:0000411,1.29e-08,10;UBERON:0001950,1.29e-08,10;UBERON:0004111,1.66e-07,122;UBERON:0002619,1.67e-07,17;UBERON:0000025,3.52e-07,114 | |||
|phase1_expression=1.44133962394315,0.348975407639361,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.7008658030214,0,0,0,0,0,0,0.215471232685889,0.760093677825496,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,1.52065396829272,1.10128051297009,3.9119567217402,0.65407546914134,0.659058548203415,1.74986909166855,1.25987779462826,0,0,0,0,0.514518872071894,0.85960031981627,0,3.23706337375356,3.1739458756322,2.53532561402472,3.04960078862219,4.4464739805557,0.449949858640699,0.988866362566974,0.7104801149461,5.69240209984969,7.68436610643109,2.59224030771194,1.89008313664367,2.73422449756797,5.42736870367227,5.74258206474195,0.857435594504678,1.43768206527355,0.919218786610021,5.50579404996943,8.17198963745201,6.29786786350598,1.05509030184155,1.46380229763855,1.56274011167028,8.65467296904281,5.06486349028512,5.19514042441154,6.48182888042069,4.41352210477219,4.10078780815661,1.59025005999687,3.09843396437821,0.579728977403356,0,0,0,0,0,0.421333260395256,0.511290967734173,0.779358013808606,0.70667914902068,2.25349471642689,1.28326477414318,5.09610479413291,0,6.49473123033642,5.32055717497707,8.08839112023653,0.79928715803342,0,0.890652834388949,0.867426633830679,1.21786191324856,0.230615497256059,1.20578112442098,1.29347577849275,0.753999547978053,0.494389935468748,0.289198713839823,0,0.485300549842228,0.220841518460394,0,1.86391761218122,3.80615036115011,9.21565509979202,0.255457055208591,0,0,0,4.49371918214468,5.49000723382352,3.39266750704734,5.04090528557602,5.37002460393694,6.2336413367868,5.02947915510049,0.712875546952214,0.622034853050465,0.252722758433675,1.05220927943237,0.780722657776222,1.37941262660084,0.900310649026746,1.50704817835715,1.08858398642125,1.15302348256365,2.06143794031403,0.776110112217047,0.431135985865684,0.945530400839096,0.703804496655795,0.876782929710299,1.39023624612799,0.348252166522167,0.411564272815887,0.995171334092466,0,0,0,0,0.234526059981096,0.180062061461015,0,0.393528463494808,0.462801338662135,0.232533944750408,0.268273401399619,0,0.493679549740441,0.164167464079095,0,0.438599962275997,0.439100230582101,0.134206418760372,4.6263788684108,1.54356918568927,0,0,1.49301775374664,1.39342003116263,0.77320476793256,0.605050573870028,0.444756087689741,0.380451252225118,0.474529061544512,0.494096864172033,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0.864552199498777,0.995706366271836,0.569003702859245,1.25673363870702,0,0.203651327845314,1.16371492300575,0.911765658574141,0.885311519739602,1.03327103585722,1.72698600625512,3.70191491765402,0.296452627087149,0.500535317148282,0.589676985339609,0,0.202860121388503,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,1.84753190166605,0.947457058852424,0.325929952884052,1.18821560042632,0.704070744865506,1.00503754465089,0.714130922658041,2.14647012643579,0.788175720530955,0.664394068946325,1.2756381492599,1.14704320301017,1.89953480052485,1.15719246865209,0,0,0,0.551873492609465,5.9403718295483,7.61875962849321,0.983609672260053,0.252470927204373,0.315508219416257,1.17131623288992,1.29254038639679,1.43381278771531,2.45078541490634,2.26461224631066,2.42886421004937,2.04579100537918,1.58115111178609,6.74774764485795,0.425820255624806,1.42452482933804,1.14020871547503,1.48473110675282,0,0.728341908464944,1.81394134178851,0.188605079755898,0.590603785761546,0,0.258428293168221,0,0.712994756769443,0.316036757935816,0,0,0,0.540183282093931,1.4229455216103,1.28602221018955,1.41872186913819,1.60531935841864,2.13913726782757,0.913394847343798,0.938686832254841,0.21183207086382,0.882113592219848,0.32977250588296,0.322928853391811,0.120625849856312,0.358117032009409,0.328281799490123,1.45740418314925,7.6024373824309,0,0.82554747185289,0.370389054739423,0,0.136694227721025,0,0,0,0,1.90934123603023,1.58167996790568,1.21991680276109,2.80813886136683,3.3454127362315,3.49380101993884,1.07891477107857,1.90102948168273,2.35580347785627,1.8146096260851,0.621339313086926,0,0.747582730219894,0.827292452285488,0,0.516639293910924,0.506868376472335,0.117357238645754,0.2604087696879,0.524296722128554,0,0.288030006257865,0.632022241256357,1.01362607645082,0.924398614483445,0.649604114888975,0.179026695667481,0.39736270956253,0.721172697119813,1.03382669022204,0.201932899896295,0.381034033274999,0.302478555410522,0.487289403698762,0.481059208201647,0.350630706544707,0.680191150845634,0.221985953374065,0.269141569828427,0.503653849092235,4.056981474676,0.750729901804728,0.36630324853453,1.07184189539533,0,3.95326289831947,3.22227665555024,3.43737308063638,7.21783365843488,7.53590771747707,7.55393897389701,3.37511250115903,4.95353323546643,3.17199686288943,5.1776031175182,0.93408612825759,1.59609949360412,1.02440163452481,0.243106717068294,1.04806581313991,0.551530525350042,0.44449345560323,0.206035057238894,0,0.252697211763798,0.50695859978048,0.943131706930381,0.749132059759059,1.08842759088278,0.976402972245426,0.952587382566147,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| |||
|short_description=p5@Mgat3 | |||
}} |
Latest revision as of 03:33, 27 September 2015
Short description: | p5@Mgat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Mgat3_5end |
Coexpression cluster: | NA |
Association with transcript: | -37bp_to_ENSMUST00000044970, NM_010795, uc007wvf.1_5end |
EntrezGene: | Mgat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.23e-17 | 44 |
neurectodermal cell | 3.23e-17 | 44 |
neural cell | 1.10e-16 | 43 |
neuron | 6.33e-15 | 33 |
neuronal stem cell | 6.33e-15 | 33 |
neuroblast | 6.33e-15 | 33 |
electrically signaling cell | 6.33e-15 | 33 |
electrically responsive cell | 2.14e-13 | 39 |
electrically active cell | 2.14e-13 | 39 |
CNS neuron (sensu Vertebrata) | 2.64e-12 | 23 |
neuroblast (sensu Vertebrata) | 2.64e-12 | 23 |
embryonic cell | 9.79e-12 | 70 |