FFCP PHASE1:Mm9::chr18:37984235..37984288,+: Difference between revisions
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{{FFCP|EntrezGene=93705|HGNC=|MCL_coexpression_id=1133|UniProt=|association_with_transcript=222bp_to_uc008erh.1_5end|description=CAGE_peak_1_at_Pcdhgb8_5end|id=chr18:37984235..37984288,+|ontology_enrichment_celltype=CL:0000221!2.61e-18!44;CL:0000133!2.61e-18!44;CL:0002319!6.56e-18!43;CL:0000055!1.28e-15!50;CL:0000540!1.75e-12!33;CL:0000047!1.75e-12!33;CL:0000031!1.75e-12!33;CL:0000404!1.75e-12!33;CL:0000393!2.65e-11!39;CL:0000211!2.65e-11!39;CL:0000117!3.01e-11!23;CL:0000337!3.01e-11!23;CL:0002321!6.66e-08!70;CL:0000220!6.66e-08!70|ontology_enrichment_celltype_v019_2=CL:0000221,3.00e-24,44;CL:0000133,3.00e-24,44;CL:0002319,1.07e-23,43;CL:0000540,4.51e-17,33;CL:0000047,4.51e-17,33;CL:0000031,4.51e-17,33;CL:0000404,4.51e-17,33;CL:0000393,1.87e-15,39;CL:0000211,1.87e-15,39;CL:0000117,7.43e-15,23;CL:0000337,7.43e-15,23;CL:0002321,1.35e-14,70;CL:0002453,3.12e-08,8;CL:0000333,1.68e-07,10;CL:0000095,1.68e-07,10;CL:0000243,1.68e-07,10;CL:0000123,1.68e-07,10;CL:0000125,1.68e-07,10;CL:0000030,1.68e-07,10;CL:0000339,1.68e-07,10|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.87e-36!75;UBERON:0001016!4.87e-36!75;UBERON:0001017!1.54e-35!73;UBERON:0005743!1.54e-35!73;UBERON:0004121!1.25e-33!102;UBERON:0000924!1.25e-33!102;UBERON:0006601!1.25e-33!102;UBERON:0001049!1.89e-26!52;UBERON:0005068!1.89e-26!52;UBERON:0006241!1.89e-26!52;UBERON:0007135!1.89e-26!52;UBERON:0000033!1.20e-25!63;UBERON:0002346!1.36e-25!71;UBERON:0003075!1.36e-25!71;UBERON:0007284!1.36e-25!71;UBERON:0000955!2.13e-25!50;UBERON:0006238!2.13e-25!50;UBERON:0002616!1.11e-24!49;UBERON:0003080!1.83e-19!40;UBERON:0003056!4.80e-19!49;UBERON:0002780!8.95e-19!39;UBERON:0001890!8.95e-19!39;UBERON:0006240!8.95e-19!39;UBERON:0002020!2.73e-18!34;UBERON:0002791!1.75e-15!29;UBERON:0003528!1.75e-15!29;UBERON:0001893!1.75e-15!29;UBERON:0007811!1.82e-13!86;UBERON:0000153!2.74e-13!94;UBERON:0000956!1.62e-11!21;UBERON:0001869!1.62e-11!21;UBERON:0000203!1.62e-11!21;UBERON:0002619!4.20e-10!17;UBERON:0004111!6.50e-08!122;UBERON:0003076!1.69e-07!12;UBERON:0003057!1.69e-07!12;UBERON:0000025!3.39e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.10e-48,73;UBERON:0001016,8.44e-48,75;UBERON:0004121,5.12e-40,95;UBERON:0000924,5.12e-40,95;UBERON:0006601,5.12e-40,95;UBERON:0000073,9.14e-37,54;UBERON:0001049,5.82e-35,52;UBERON:0005068,5.82e-35,52;UBERON:0006241,5.82e-35,52;UBERON:0007135,5.82e-35,52;UBERON:0002346,8.89e-33,64;UBERON:0003075,8.89e-33,64;UBERON:0007284,8.89e-33,64;UBERON:0000955,4.87e-31,47;UBERON:0006238,4.87e-31,47;UBERON:0002616,4.48e-30,46;UBERON:0010371,1.63e-28,73;UBERON:0003080,2.21e-25,40;UBERON:0002020,1.55e-24,34;UBERON:0002780,1.93e-24,39;UBERON:0001890,1.93e-24,39;UBERON:0006240,1.93e-24,39;UBERON:0003056,2.95e-23,49;UBERON:0003528,1.12e-20,29;UBERON:0002791,1.12e-20,29;UBERON:0001893,1.12e-20,29;UBERON:0010314,1.44e-19,92;UBERON:0000956,3.17e-15,21;UBERON:0001869,3.17e-15,21;UBERON:0000203,3.17e-15,21;UBERON:0002619,2.76e-13,17;UBERON:0004111,1.80e-10,122;UBERON:0003076,1.02e-09,12;UBERON:0003057,1.02e-09,12;UBERON:0000025,1.41e-09,114;UBERON:0002021,1.32e-08,10;UBERON:0000411,1.32e-08,10;UBERON:0001950,1.32e-08,10;UBERON:0011216,7.43e-08,194|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.01376931219515,1.46837401729345,2.34717403304412,27.4711697039363,14.4992880604751,10.6936444490856,7.55926676776958,15.8127820801469,0,0,0,0,0.286533439938757,0.515672092277442,7.28339259094552,3.70293685490423,2.53532561402472,0.677689064138264,0.889294796111139,0,0,0.7104801149461,23.3688086204356,48.4115064705159,1.45165457231869,2.43010688997043,2.3135745748652,7.42692559449889,11.4851641294839,1.46988959057945,2.68367318851062,5.51531271966013,8.8092704799511,6.00130489000382,7.21950706304344,2.90149833006426,3.01909223887952,2.6045668527838,9.21303896704557,6.19038871034848,9.0150966188318,7.07108605136802,7.40332740155335,4.10078780815661,0.832988126665025,3.40072020480535,0.579728977403356,0,0,0,0,0,0.561777680527007,2.21559419351475,0.779358013808606,1.7666978725517,2.81686839553361,7.69958864485907,7.64415719119937,14.2213340630666,0,0.253359865475099,0,0.68510327831436,0,1.92974780784272,0.867426633830679,1.21786191324856,0.461230994512117,0.753613202763113,0.940709657085638,0.628332956648377,0,0.86759614151947,0,1.13236794963186,0.220841518460394,0.484875253135222,0,7.90508151931177,6.70229461803056,0,0,0,0,10.6351353977424,14.640019290196,5.27748278874031,10.9509321721134,9.2057564638919,10.5971902725376,8.27430441645564,1.12023300235348,0.622034853050465,0.758168275301024,3.15662783829711,0.390361328888111,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.2811372028485,1.12442069471675,3.10444044886819,0.431135985865684,0.189106080167819,1.40760899331159,1.97276159184817,1.11218899690239,1.39300866608867,0.61734640922383,0.1990342668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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93705 | |||
|HGNC= | |||
|MCL_coexpression_id=1133 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=222bp_to_uc008erh.1_5end | |||
|cluster_id=chr18:37984235..37984288,+ | |||
|description=CAGE_peak_1_at_Pcdhgb8_5end | |||
|id=chr18:37984235..37984288,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.61e-18!44;CL:0000133!2.61e-18!44;CL:0002319!6.56e-18!43;CL:0000055!1.28e-15!50;CL:0000540!1.75e-12!33;CL:0000047!1.75e-12!33;CL:0000031!1.75e-12!33;CL:0000404!1.75e-12!33;CL:0000393!2.65e-11!39;CL:0000211!2.65e-11!39;CL:0000117!3.01e-11!23;CL:0000337!3.01e-11!23;CL:0002321!6.66e-08!70;CL:0000220!6.66e-08!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,3.00e-24,44;CL:0000133,3.00e-24,44;CL:0002319,1.07e-23,43;CL:0000540,4.51e-17,33;CL:0000047,4.51e-17,33;CL:0000031,4.51e-17,33;CL:0000404,4.51e-17,33;CL:0000393,1.87e-15,39;CL:0000211,1.87e-15,39;CL:0000117,7.43e-15,23;CL:0000337,7.43e-15,23;CL:0002321,1.35e-14,70;CL:0002453,3.12e-08,8;CL:0000333,1.68e-07,10;CL:0000095,1.68e-07,10;CL:0000243,1.68e-07,10;CL:0000123,1.68e-07,10;CL:0000125,1.68e-07,10;CL:0000030,1.68e-07,10;CL:0000339,1.68e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.87e-36!75;UBERON:0001016!4.87e-36!75;UBERON:0001017!1.54e-35!73;UBERON:0005743!1.54e-35!73;UBERON:0004121!1.25e-33!102;UBERON:0000924!1.25e-33!102;UBERON:0006601!1.25e-33!102;UBERON:0001049!1.89e-26!52;UBERON:0005068!1.89e-26!52;UBERON:0006241!1.89e-26!52;UBERON:0007135!1.89e-26!52;UBERON:0000033!1.20e-25!63;UBERON:0002346!1.36e-25!71;UBERON:0003075!1.36e-25!71;UBERON:0007284!1.36e-25!71;UBERON:0000955!2.13e-25!50;UBERON:0006238!2.13e-25!50;UBERON:0002616!1.11e-24!49;UBERON:0003080!1.83e-19!40;UBERON:0003056!4.80e-19!49;UBERON:0002780!8.95e-19!39;UBERON:0001890!8.95e-19!39;UBERON:0006240!8.95e-19!39;UBERON:0002020!2.73e-18!34;UBERON:0002791!1.75e-15!29;UBERON:0003528!1.75e-15!29;UBERON:0001893!1.75e-15!29;UBERON:0007811!1.82e-13!86;UBERON:0000153!2.74e-13!94;UBERON:0000956!1.62e-11!21;UBERON:0001869!1.62e-11!21;UBERON:0000203!1.62e-11!21;UBERON:0002619!4.20e-10!17;UBERON:0004111!6.50e-08!122;UBERON:0003076!1.69e-07!12;UBERON:0003057!1.69e-07!12;UBERON:0000025!3.39e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.10e-48,73;UBERON:0001016,8.44e-48,75;UBERON:0004121,5.12e-40,95;UBERON:0000924,5.12e-40,95;UBERON:0006601,5.12e-40,95;UBERON:0000073,9.14e-37,54;UBERON:0001049,5.82e-35,52;UBERON:0005068,5.82e-35,52;UBERON:0006241,5.82e-35,52;UBERON:0007135,5.82e-35,52;UBERON:0002346,8.89e-33,64;UBERON:0003075,8.89e-33,64;UBERON:0007284,8.89e-33,64;UBERON:0000955,4.87e-31,47;UBERON:0006238,4.87e-31,47;UBERON:0002616,4.48e-30,46;UBERON:0010371,1.63e-28,73;UBERON:0003080,2.21e-25,40;UBERON:0002020,1.55e-24,34;UBERON:0002780,1.93e-24,39;UBERON:0001890,1.93e-24,39;UBERON:0006240,1.93e-24,39;UBERON:0003056,2.95e-23,49;UBERON:0003528,1.12e-20,29;UBERON:0002791,1.12e-20,29;UBERON:0001893,1.12e-20,29;UBERON:0010314,1.44e-19,92;UBERON:0000956,3.17e-15,21;UBERON:0001869,3.17e-15,21;UBERON:0000203,3.17e-15,21;UBERON:0002619,2.76e-13,17;UBERON:0004111,1.80e-10,122;UBERON:0003076,1.02e-09,12;UBERON:0003057,1.02e-09,12;UBERON:0000025,1.41e-09,114;UBERON:0002021,1.32e-08,10;UBERON:0000411,1.32e-08,10;UBERON:0001950,1.32e-08,10;UBERON:0011216,7.43e-08,194 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0.57423196411502,0,0.215471232685889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76255545165808,1.01376931219515,1.46837401729345,2.34717403304412,27.4711697039363,14.4992880604751,10.6936444490856,7.55926676776958,15.8127820801469,0,0,0,0,0.286533439938757,0.515672092277442,7.28339259094552,3.70293685490423,2.53532561402472,0.677689064138264,0.889294796111139,0,0,0.7104801149461,23.3688086204356,48.4115064705159,1.45165457231869,2.43010688997043,2.3135745748652,7.42692559449889,11.4851641294839,1.46988959057945,2.68367318851062,5.51531271966013,8.8092704799511,6.00130489000382,7.21950706304344,2.90149833006426,3.01909223887952,2.6045668527838,9.21303896704557,6.19038871034848,9.0150966188318,7.07108605136802,7.40332740155335,4.10078780815661,0.832988126665025,3.40072020480535,0.579728977403356,0,0,0,0,0,0.561777680527007,2.21559419351475,0.779358013808606,1.7666978725517,2.81686839553361,7.69958864485907,7.64415719119937,14.2213340630666,0,0.253359865475099,0,0.68510327831436,0,1.92974780784272,0.867426633830679,1.21786191324856,0.461230994512117,0.753613202763113,0.940709657085638,0.628332956648377,0,0.86759614151947,0,1.13236794963186,0.220841518460394,0.484875253135222,0,7.90508151931177,6.70229461803056,0,0,0,0,10.6351353977424,14.640019290196,5.27748278874031,10.9509321721134,9.2057564638919,10.5971902725376,8.27430441645564,1.12023300235348,0.622034853050465,0.758168275301024,3.15662783829711,0.390361328888111,0.229902104433473,0.720248519221397,0.753524089178575,1.02054748726992,1.2811372028485,1.12442069471675,3.10444044886819,0.431135985865684,0.189106080167819,1.40760899331159,1.97276159184817,1.11218899690239,1.39300866608867,0.61734640922383,0.199034266818493,0,0,0,0,0.469052119962192,0.180062061461015,0,0.590292695242212,0.617068451549513,0.232533944750408,0.268273401399619,0.817357396570186,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.219550115291051,0.134206418760372,9.46304768538573,8.23236899034275,0,0,0.426576501070468,0,0.515469845288373,0.201683524623343,0.444756087689741,0.570676878337677,0.474529061544512,0.329397909448022,0.754005626400808,0.795825888164603,0.38992817423824,0,0.216138049874694,0.398282546508734,0.758671603812327,0.456994050438915,1.1270773567308,0.814605311381257,0.193952487167626,0.701358198903186,1.13825766823663,0.590440591918409,0.627994911365499,0.370191491765402,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0.505157755894224,0.179397413521912,0,0.369506380333209,0.37898282354097,0.651859905768103,0.678980343100753,0.234690248288502,1.17254380209271,0.476087281772027,0.585400943573396,0.472905432318573,1.32878813789265,1.91345722388985,0.163863314715738,0.518054945597687,0.289298117163023,0,0,0.491764273019036,0.275936746304732,8.50918126935297,4.80567915028033,0,0,1.26203287766503,0,3.87762115919038,1.43381278771531,2.22798674082394,1.69845918473299,1.21443210502468,1.16902343164525,2.76701444562566,9.63963949265421,1.27746076687442,1.6025904330053,0.977321756121456,3.46437258242324,0,0.971122544619926,0.302323556964751,0.188605079755898,0.590603785761546,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,6.46835250932197,0.720244376125241,1.29358683782755,1.07168517515796,2.30542303734956,2.67553226403106,3.62007845324666,4.56697423671899,0.469343416127421,0.21183207086382,1.10264199027481,0.8244312647074,0.484393280087717,0.603129249281559,0.596861720015682,0.328281799490123,0.582961673259701,5.56275906031529,0,0.206386867963223,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.632671987162271,0.813277868507395,0.540026704109006,0.627264888043406,0.218362563746178,0.809186078308924,1.32245529160537,0.523511883968059,0.518459893167171,2.4853572523477,0,0.598066184175915,0.330916980914195,1.36115831840833,0.774958940866387,1.520605129417,0.704143431874524,1.5624526181274,0.524296722128554,0.241584120826006,0.288030006257865,0,0.608175645870493,0.308132871494482,0.25984164595559,0,0.39736270956253,0,0,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.443971906748129,0,0,0.772758376128762,0.93841237725591,1.64836461840539,0,1.50471631210609,11.2950368523413,8.28585425712918,7.44764167471216,9.10821866421544,6.85082519770642,6.0431511791176,6.75022500231806,5.85417564191487,5.89085131679466,7.7664046762773,0.31136204275253,0.798049746802062,0.682934423016537,0.972426868273176,1.04806581313991,0.919217542250071,1.33348036680969,0.824140228955577,1.92551525755089,0.758091635291392,3.04175159868288,1.69763707247469,1.40462261204824,0.832326981263301,1.09127391015665,1.42888107384922,0.579421629724277,0.38581844092741,0.412085900803307,0.588795680537589,2.05721551431249,0.532427418478012,1.1921809497366,1.16277133305863,1.03520318456864,0.846146078916765,1.09756783723664,1.05227884575137,0.679020569229309,1.12228454331548,1.18635018124174,0.591026894253381,0.409231043169689,0.77468420592983,0.57871983294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| |||
|short_description=p1@Pcdhgb8 | |||
}} |
Latest revision as of 06:02, 27 September 2015
Short description: | p1@Pcdhgb8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhgb8_5end |
Coexpression cluster: | MCL_coexpression_mm9:1133 |
Association with transcript: | 222bp_to_uc008erh.1_5end |
EntrezGene: | Pcdhgb8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 3.00e-24 | 44 |
neurectodermal cell | 3.00e-24 | 44 |
neural cell | 1.07e-23 | 43 |
neuron | 4.51e-17 | 33 |
neuronal stem cell | 4.51e-17 | 33 |
neuroblast | 4.51e-17 | 33 |
electrically signaling cell | 4.51e-17 | 33 |
electrically responsive cell | 1.87e-15 | 39 |
electrically active cell | 1.87e-15 | 39 |
CNS neuron (sensu Vertebrata) | 7.43e-15 | 23 |
neuroblast (sensu Vertebrata) | 7.43e-15 | 23 |
embryonic cell | 1.35e-14 | 70 |
oligodendrocyte precursor cell | 3.12e-08 | 8 |
migratory neural crest cell | 1.68e-07 | 10 |
neuron associated cell | 1.68e-07 | 10 |
glial cell (sensu Vertebrata) | 1.68e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.68e-07 | 10 |
glial cell | 1.68e-07 | 10 |
glioblast | 1.68e-07 | 10 |
glioblast (sensu Vertebrata) | 1.68e-07 | 10 |