FFCP PHASE1:Mm9::chrX:12339216..12339239,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26896 | |EntrezGene=26896 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2539 | |||
|TSSclassifier=NA | |||
|UniProt=A2BDN7,A2ABV5 | |UniProt=A2BDN7,A2ABV5 | ||
|association_with_transcript=-17bp_to_ENSMUST00000076016,ENSMUST00000096495,ENSMUST00000124053_5end | |association_with_transcript=-17bp_to_ENSMUST00000076016,ENSMUST00000096495,ENSMUST00000124053_5end | ||
|cluster_id=chrX:12339216..12339239,- | |||
|description=CAGE_peak_4_at_Med14_5end | |description=CAGE_peak_4_at_Med14_5end | ||
|id=chrX:12339216..12339239,- | |id=chrX:12339216..12339239,- | ||
|ontology_enrichment_celltype=CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000117!4.25e-10!23;CL:0000337!4.25e-10!23;CL:0000393!1.34e-07!39;CL:0000211!1.34e-07!39 | |ontology_enrichment_celltype=CL:0000540!1.10e-10!33;CL:0000047!1.10e-10!33;CL:0000031!1.10e-10!33;CL:0000404!1.10e-10!33;CL:0000117!4.25e-10!23;CL:0000337!4.25e-10!23;CL:0000393!1.34e-07!39;CL:0000211!1.34e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.72e-11,33;CL:0000047,2.72e-11,33;CL:0000031,2.72e-11,33;CL:0000404,2.72e-11,33;CL:0000117,4.44e-11,23;CL:0000337,4.44e-11,23;CL:0000393,6.24e-08,39;CL:0000211,6.24e-08,39;CL:0000221,5.00e-07,44;CL:0000133,5.00e-07,44;CL:0002319,6.93e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!2.85e-18!86;UBERON:0000153!1.58e-16!94;UBERON:0002020!3.90e-15!34;UBERON:0000073!2.67e-14!75;UBERON:0001016!2.67e-14!75;UBERON:0001017!6.11e-14!73;UBERON:0005743!6.11e-14!73;UBERON:0002791!2.02e-13!29;UBERON:0003528!2.02e-13!29;UBERON:0001893!2.02e-13!29;UBERON:0001049!7.92e-13!52;UBERON:0005068!7.92e-13!52;UBERON:0006241!7.92e-13!52;UBERON:0007135!7.92e-13!52;UBERON:0004121!1.36e-12!102;UBERON:0000924!1.36e-12!102;UBERON:0006601!1.36e-12!102;UBERON:0000033!6.21e-12!63;UBERON:0000955!6.42e-12!50;UBERON:0006238!6.42e-12!50;UBERON:0003056!1.72e-11!49;UBERON:0002616!1.80e-11!49;UBERON:0003080!3.21e-11!40;UBERON:0002780!9.01e-11!39;UBERON:0001890!9.01e-11!39;UBERON:0006240!9.01e-11!39;UBERON:0002346!2.36e-10!71;UBERON:0003075!2.36e-10!71;UBERON:0007284!2.36e-10!71;UBERON:0000956!3.42e-10!21;UBERON:0001869!3.42e-10!21;UBERON:0000203!3.42e-10!21;UBERON:0000477!3.62e-08!154;UBERON:0000064!4.73e-08!99;UBERON:0002021!4.85e-08!10;UBERON:0000411!4.85e-08!10;UBERON:0001950!4.85e-08!10;UBERON:0002619!5.52e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.04e-17,34;UBERON:0004121,3.08e-16,95;UBERON:0000924,3.08e-16,95;UBERON:0006601,3.08e-16,95;UBERON:0003528,2.45e-15,29;UBERON:0002791,2.45e-15,29;UBERON:0001893,2.45e-15,29;UBERON:0001016,6.31e-15,75;UBERON:0001017,1.58e-14,73;UBERON:0010371,1.76e-14,73;UBERON:0002346,8.61e-14,64;UBERON:0003075,8.61e-14,64;UBERON:0007284,8.61e-14,64;UBERON:0000073,2.38e-13,54;UBERON:0001049,6.38e-13,52;UBERON:0005068,6.38e-13,52;UBERON:0006241,6.38e-13,52;UBERON:0007135,6.38e-13,52;UBERON:0003056,3.04e-12,49;UBERON:0003080,7.50e-12,40;UBERON:0000956,9.78e-12,21;UBERON:0001869,9.78e-12,21;UBERON:0000203,9.78e-12,21;UBERON:0002780,2.33e-11,39;UBERON:0001890,2.33e-11,39;UBERON:0006240,2.33e-11,39;UBERON:0000955,4.14e-11,47;UBERON:0006238,4.14e-11,47;UBERON:0002616,1.24e-10,46;UBERON:0002619,2.96e-09,17;UBERON:0002021,8.69e-09,10;UBERON:0000411,8.69e-09,10;UBERON:0001950,8.69e-09,10;UBERON:0010314,5.03e-08,92;UBERON:0002370,9.85e-08,23;UBERON:0000974,9.85e-08,23;UBERON:0004807,9.85e-08,23;UBERON:0005058,9.85e-08,23;UBERON:0003351,9.85e-08,23;UBERON:0009113,9.85e-08,23;UBERON:0003295,9.85e-08,23;UBERON:0009722,9.85e-08,23;UBERON:0005562,9.85e-08,23;UBERON:0007690,9.85e-08,23;UBERON:0006562,1.04e-07,24;UBERON:0001557,1.04e-07,24;UBERON:0001042,1.04e-07,24;UBERON:0008814,1.04e-07,24;UBERON:0009145,1.04e-07,24;UBERON:0000483,2.50e-07,174;UBERON:0007811,4.80e-07,36;UBERON:0003408,4.88e-07,24;UBERON:0000119,7.02e-07,176 | |||
|phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,0,0.839396359559449,0,2.45334314538995,18.3025338797167,17.5548394741495,9.75942418885378,6.94017783259427,2.73921167889929,3.93391810885488,0.999329285446988,1.41732687172878,0,0.946386496074713,0.959801035240171,0.42438965179803,3.23164502574065,0.496454756004426,0.261199789138935,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.443461021310609,3.81018404075779,3.69038872550742,15.8481681015439,0.577703239502549,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0,0,0,0.251793635951155,0.709638518536602,1.10128051297009,0.782391344348039,0.872100625521786,0,0.388859798148567,0.279972843250725,0,1.67782606057736,10.8804321301702,8.06625117941913,0.771778308107841,0,0.515672092277442,4.24864567805155,6.34789175126439,5.70448263155561,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,6.53244557543409,8.10035629990144,6.09942387919008,3.42781181284564,3.09215957332259,7.22695715368229,5.94241920313065,6.43453150627015,1.10115880999389,6.2566795661742,4.30098293117482,2.90149833006426,2.47016637726506,2.08365348222704,4.18774498502071,5.06486349028512,4.27835093775068,1.76777151284201,4.55589378557129,4.84638559145781,2.04460721999597,1.5870027622425,0,0,0.679971333707751,1.07940638327563,0,0.896053774194671,1.26399978118577,0.511290967734173,0,0,1.69012103732017,1.28326477414318,0,0,0.865964164044856,0.506719730950197,1.51657333504435,1.02765491747154,1.03575153458869,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,0.502666365318702,0.247194967734374,1.44599356919912,3.5384422077995,1.13236794963186,1.98757366614354,1.93950101254089,0,1.17112318804619,0.628340120440365,0.766371165625774,0.479260498023681,0.599902730993408,0.381210681219194,5.09288173976397,7.32000964509802,9.29842205635197,10.081810571152,9.2057564638919,3.32460871295296,4.38051410282946,0.712875546952214,0.870848794270651,0.505445516867349,0.420883711772948,1.30120442962704,2.06911893990126,1.26043490863744,1.35634336052144,1.76894897793452,2.17793324484245,2.62364828767241,1.55222022443409,0.862271971731369,1.70195472151037,1.05570674498369,0.43839146485515,0,1.74126083261083,0.823128545631774,0.796137067273973,0.702213187313235,0,0,0.414251545071004,1.17263029990548,1.2604344302271,2.13070262026689,0.590292695242212,1.3884040159864,1.16266972375204,1.60964040839772,1.75148013550754,0.987359099480883,1.14917224855367,1.29710095273369,1.02339991197733,1.09775057645525,0.939444931322602,8.83217783969334,5.65975368086064,0.660837565967596,0.528901133327089,0.639864751605702,0.928946687441754,1.9330119198314,1.00841762311671,0.667134131534611,0.380451252225118,0,0.823494773620054,0.754005626400808,0.596869416123452,0.58489226135736,0,1.08069024937347,0.597423819763102,0.189667900953082,0.685491075658373,0,1.4255592949172,0.387904974335251,0.701358198903186,0.505892296994058,0.590440591918409,0.470996183524124,1.23397163921801,0.296452627087149,1.16791574001266,1.76903095601883,1.57403478669398,1.62288097110802,1.20588579876208,0.25462585178142,0.575392274901621,0.810676133875177,1.64736847912849,4.31304619582064,1.11642284300551,0.312037673114561,1.01031551178845,0.179397413521912,1.92977408545347,0.739012760666419,0.947457058852424,1.14075483509418,0.678980343100753,1.40814148973101,1.67506257441816,0.476087281772027,0.975668239288994,0.630540576424764,1.7717175171902,1.2756381492599,0.491589944147214,0.518054945597687,1.59113964439663,0,1.63171705145613,0.491764273019036,1.10374698521893,4.65596710964597,2.81308047821288,0.819674726883377,1.76729649043061,1.57754109708128,1.17131623288992,1.93881057959519,1.91175038362042,2.67358408898873,2.83076530788832,3.64329631507405,1.16902343164525,1.58115111178609,5.14114106274891,0.425820255624806,0.534196811001766,1.62886959353576,1.15479086080775,0,0.485561272309963,0.906970670894253,0.754420319023592,0,0.922305443831782,1.03371317267288,0,0,0.632073515871632,0,2.06271086496374,1.02131881726136,0.900305470156551,0.388076051348264,0.643011105094777,1.24138163549592,0.535106452806212,1.31639216481697,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,1.97863503529776,3.06782410722221,3.67908842061751,2.38744688006273,2.79039529566604,0.291480836629851,3.70850604021019,1.02522528478712,0.206386867963223,0.925972636848558,0.376736914009382,1.23024804948923,2.0590035588587,0.339956859987711,0.559805809294632,0.967399816630967,0,0.632671987162271,0.609958401380546,0.756037385752609,0.209088296014469,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,2.24274819065968,0.330916980914195,2.72231663681667,1.6790777052105,1.520605129417,1.76035857968631,1.95306577265925,1.25831213310853,0.241584120826006,1.44015003128933,6.32022241256356,0.405450430580328,1.02710957164827,2.98817892848929,3.58053391334963,4.56967115996909,4.08664528367894,5.61220203263393,6.86571859647404,6.32516495236499,5.94874492307359,5.84747284438514,5.96513418170043,7.24636793525727,1.36038230169127,0.221985953374065,0.0897138566094757,0.167884616364078,0.579568782096571,0.375364950902364,0.183151624267265,1.2862102744744,0.501572104035363,11.2950368523413,17.0320337507655,14.8952833494243,19.7631159695241,23.9778881919725,12.8416962556249,13.5004500046361,11.7083512838297,10.8754178156209,12.4262474820437,1.3492355185943,3.19219898720825,2.21953687480374,2.18796045361465,1.04806581313991,1.2869045591501,0.888986911206461,1.85431551515005,2.56735367673452,1.26348605881899,1.01391719956096,2.07488975524684,0.842773567228942,1.47257850531199,1.95280594449085,1.90517476513229,2.54945517078682,2.12200142510076,1.23625770240992,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,1.0174249164263,1.12931256498397,1.26921911837515,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,1.77952527186261,1.67457620038458,1.63692417267876,1.85924209423159,1.35034627686799,1.49886346762768,2.8071793013449,0.644613162144895,0.956441660344217,1.76473135295612,1.15933917810211 | |phase1_expression=0.960893082628764,0.348975407639361,0,0.60492842261366,0,0.839396359559449,0,2.45334314538995,18.3025338797167,17.5548394741495,9.75942418885378,6.94017783259427,2.73921167889929,3.93391810885488,0.999329285446988,1.41732687172878,0,0.946386496074713,0.959801035240171,0.42438965179803,3.23164502574065,0.496454756004426,0.261199789138935,0.159992422793407,0.68822784320151,0,0,0.215471232685889,0.190023419456374,0.756090389279792,0.443461021310609,3.81018404075779,3.69038872550742,15.8481681015439,0.577703239502549,0.498703936075477,0.408338712524738,0,0.7813353445238,0,0,0,0,0.251793635951155,0.709638518536602,1.10128051297009,0.782391344348039,0.872100625521786,0,0.388859798148567,0.279972843250725,0,1.67782606057736,10.8804321301702,8.06625117941913,0.771778308107841,0,0.515672092277442,4.24864567805155,6.34789175126439,5.70448263155561,0,0,0,0,0.7104801149461,0.299600110518405,0.384218305321555,6.53244557543409,8.10035629990144,6.09942387919008,3.42781181284564,3.09215957332259,7.22695715368229,5.94241920313065,6.43453150627015,1.10115880999389,6.2566795661742,4.30098293117482,2.90149833006426,2.47016637726506,2.08365348222704,4.18774498502071,5.06486349028512,4.27835093775068,1.76777151284201,4.55589378557129,4.84638559145781,2.04460721999597,1.5870027622425,0,0,0.679971333707751,1.07940638327563,0,0.896053774194671,1.26399978118577,0.511290967734173,0,0,1.69012103732017,1.28326477414318,0,0,0.865964164044856,0.506719730950197,1.51657333504435,1.02765491747154,1.03575153458869,0.29688427812965,0.173485326766136,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,0.502666365318702,0.247194967734374,1.44599356919912,3.5384422077995,1.13236794963186,1.98757366614354,1.93950101254089,0,1.17112318804619,0.628340120440365,0.766371165625774,0.479260498023681,0.599902730993408,0.381210681219194,5.09288173976397,7.32000964509802,9.29842205635197,10.081810571152,9.2057564638919,3.32460871295296,4.38051410282946,0.712875546952214,0.870848794270651,0.505445516867349,0.420883711772948,1.30120442962704,2.06911893990126,1.26043490863744,1.35634336052144,1.76894897793452,2.17793324484245,2.62364828767241,1.55222022443409,0.862271971731369,1.70195472151037,1.05570674498369,0.43839146485515,0,1.74126083261083,0.823128545631774,0.796137067273973,0.702213187313235,0,0,0.414251545071004,1.17263029990548,1.2604344302271,2.13070262026689,0.590292695242212,1.3884040159864,1.16266972375204,1.60964040839772,1.75148013550754,0.987359099480883,1.14917224855367,1.29710095273369,1.02339991197733,1.09775057645525,0.939444931322602,8.83217783969334,5.65975368086064,0.660837565967596,0.528901133327089,0.639864751605702,0.928946687441754,1.9330119198314,1.00841762311671,0.667134131534611,0.380451252225118,0,0.823494773620054,0.754005626400808,0.596869416123452,0.58489226135736,0,1.08069024937347,0.597423819763102,0.189667900953082,0.685491075658373,0,1.4255592949172,0.387904974335251,0.701358198903186,0.505892296994058,0.590440591918409,0.470996183524124,1.23397163921801,0.296452627087149,1.16791574001266,1.76903095601883,1.57403478669398,1.62288097110802,1.20588579876208,0.25462585178142,0.575392274901621,0.810676133875177,1.64736847912849,4.31304619582064,1.11642284300551,0.312037673114561,1.01031551178845,0.179397413521912,1.92977408545347,0.739012760666419,0.947457058852424,1.14075483509418,0.678980343100753,1.40814148973101,1.67506257441816,0.476087281772027,0.975668239288994,0.630540576424764,1.7717175171902,1.2756381492599,0.491589944147214,0.518054945597687,1.59113964439663,0,1.63171705145613,0.491764273019036,1.10374698521893,4.65596710964597,2.81308047821288,0.819674726883377,1.76729649043061,1.57754109708128,1.17131623288992,1.93881057959519,1.91175038362042,2.67358408898873,2.83076530788832,3.64329631507405,1.16902343164525,1.58115111178609,5.14114106274891,0.425820255624806,0.534196811001766,1.62886959353576,1.15479086080775,0,0.485561272309963,0.906970670894253,0.754420319023592,0,0.922305443831782,1.03371317267288,0,0,0.632073515871632,0,2.06271086496374,1.02131881726136,0.900305470156551,0.388076051348264,0.643011105094777,1.24138163549592,0.535106452806212,1.31639216481697,0.913394847343798,0.23467170806371,0.42366414172764,0.441056796109924,1.97863503529776,3.06782410722221,3.67908842061751,2.38744688006273,2.79039529566604,0.291480836629851,3.70850604021019,1.02522528478712,0.206386867963223,0.925972636848558,0.376736914009382,1.23024804948923,2.0590035588587,0.339956859987711,0.559805809294632,0.967399816630967,0,0.632671987162271,0.609958401380546,0.756037385752609,0.209088296014469,0.436725127492355,0.674321731924103,0.826534557253359,0.26175594198403,0.259229946583586,0.621339313086926,0.56369293868419,2.24274819065968,0.330916980914195,2.72231663681667,1.6790777052105,1.520605129417,1.76035857968631,1.95306577265925,1.25831213310853,0.241584120826006,1.44015003128933,6.32022241256356,0.405450430580328,1.02710957164827,2.98817892848929,3.58053391334963,4.56967115996909,4.08664528367894,5.61220203263393,6.86571859647404,6.32516495236499,5.94874492307359,5.84747284438514,5.96513418170043,7.24636793525727,1.36038230169127,0.221985953374065,0.0897138566094757,0.167884616364078,0.579568782096571,0.375364950902364,0.183151624267265,1.2862102744744,0.501572104035363,11.2950368523413,17.0320337507655,14.8952833494243,19.7631159695241,23.9778881919725,12.8416962556249,13.5004500046361,11.7083512838297,10.8754178156209,12.4262474820437,1.3492355185943,3.19219898720825,2.21953687480374,2.18796045361465,1.04806581313991,1.2869045591501,0.888986911206461,1.85431551515005,2.56735367673452,1.26348605881899,1.01391719956096,2.07488975524684,0.842773567228942,1.47257850531199,1.95280594449085,1.90517476513229,2.54945517078682,2.12200142510076,1.23625770240992,1.03039244094078,0.685738504770831,0.532427418478012,1.90748951957857,1.0174249164263,1.12931256498397,1.26921911837515,1.09756783723664,1.05227884575137,1.22223702461276,1.68342681497322,1.77952527186261,1.67457620038458,1.63692417267876,1.85924209423159,1.35034627686799,1.49886346762768,2.8071793013449,0.644613162144895,0.956441660344217,1.76473135295612,1.15933917810211 | ||
|short_description=p4@Med14 | |short_description=p4@Med14 | ||
}} | }} |
Latest revision as of 13:35, 1 October 2015
Short description: | p4@Med14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Med14_5end |
Coexpression cluster: | MCL_coexpression_mm9:2539 |
Association with transcript: | -17bp_to_ENSMUST00000076016, ENSMUST00000096495, ENSMUST00000124053_5end |
EntrezGene: | Med14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.72e-11 | 33 |
neuronal stem cell | 2.72e-11 | 33 |
neuroblast | 2.72e-11 | 33 |
electrically signaling cell | 2.72e-11 | 33 |
CNS neuron (sensu Vertebrata) | 4.44e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.44e-11 | 23 |
electrically responsive cell | 6.24e-08 | 39 |
electrically active cell | 6.24e-08 | 39 |
ectodermal cell | 5.00e-07 | 44 |
neurectodermal cell | 5.00e-07 | 44 |
neural cell | 6.93e-07 | 43 |