Personal tools

FFCP PHASE1:Mm9::chrX:139953056..139953071,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chrX:139953056..139953071,+ |short_description=p6@Pak3 |description=CAGE_peak_6_at_Pak3_5end |association_with_transcript=-62bp_to_ENSMUST00000033640,ENSMUST000...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chrX:139953056..139953071,+
|DHSsupport=NA
|short_description=p6@Pak3
|DPIdataset=NA
|description=CAGE_peak_6_at_Pak3_5end
|association_with_transcript=-62bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|EntrezGene=18481
|EntrezGene=18481
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q61036,A3KGC0
|UniProt=Q61036,A3KGC0
|association_with_transcript=-62bp_to_ENSMUST00000033640,ENSMUST00000070348,NM_001195048,uc009umg.2_5end
|cluster_id=chrX:139953056..139953071,+
|description=CAGE_peak_6_at_Pak3_5end
|id=chrX:139953056..139953071,+
|ontology_enrichment_celltype=CL:0000117!1.64e-12!23;CL:0000337!1.64e-12!23;CL:0000393!6.19e-12!39;CL:0000211!6.19e-12!39;CL:0000540!1.59e-11!33;CL:0000047!1.59e-11!33;CL:0000031!1.59e-11!33;CL:0000404!1.59e-11!33;CL:0000055!3.05e-08!50;CL:0000221!3.88e-08!44;CL:0000133!3.88e-08!44;CL:0002319!5.03e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,4.61e-14,23;CL:0000337,4.61e-14,23;CL:0000540,1.35e-09,33;CL:0000047,1.35e-09,33;CL:0000031,1.35e-09,33;CL:0000404,1.35e-09,33;CL:0000393,2.72e-08,39;CL:0000211,2.72e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!1.07e-26!102;UBERON:0000924!1.07e-26!102;UBERON:0006601!1.07e-26!102;UBERON:0000033!1.45e-26!63;UBERON:0000073!1.58e-25!75;UBERON:0001016!1.58e-25!75;UBERON:0001017!3.41e-25!73;UBERON:0005743!3.41e-25!73;UBERON:0002346!1.25e-23!71;UBERON:0003075!1.25e-23!71;UBERON:0007284!1.25e-23!71;UBERON:0001049!1.48e-23!52;UBERON:0005068!1.48e-23!52;UBERON:0006241!1.48e-23!52;UBERON:0007135!1.48e-23!52;UBERON:0000955!2.69e-23!50;UBERON:0006238!2.69e-23!50;UBERON:0003056!5.18e-23!49;UBERON:0002616!1.60e-22!49;UBERON:0003080!8.49e-20!40;UBERON:0002780!5.99e-19!39;UBERON:0001890!5.99e-19!39;UBERON:0006240!5.99e-19!39;UBERON:0002020!2.66e-18!34;UBERON:0002791!5.88e-16!29;UBERON:0003528!5.88e-16!29;UBERON:0001893!5.88e-16!29;UBERON:0007811!3.74e-14!86;UBERON:0000153!8.13e-13!94;UBERON:0000956!1.44e-11!21;UBERON:0001869!1.44e-11!21;UBERON:0000203!1.44e-11!21;UBERON:0002619!5.04e-10!17;UBERON:0002021!1.09e-08!10;UBERON:0000411!1.09e-08!10;UBERON:0001950!1.09e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.40e-28,54;UBERON:0002346,3.93e-28,64;UBERON:0003075,3.93e-28,64;UBERON:0007284,3.93e-28,64;UBERON:0001017,2.29e-27,73;UBERON:0004121,3.36e-27,95;UBERON:0000924,3.36e-27,95;UBERON:0006601,3.36e-27,95;UBERON:0001016,2.61e-26,75;UBERON:0010371,3.26e-26,73;UBERON:0001049,8.15e-26,52;UBERON:0005068,8.15e-26,52;UBERON:0006241,8.15e-26,52;UBERON:0007135,8.15e-26,52;UBERON:0002020,1.04e-23,34;UBERON:0003056,1.45e-23,49;UBERON:0000955,3.79e-22,47;UBERON:0006238,3.79e-22,47;UBERON:0002616,6.09e-21,46;UBERON:0003528,3.02e-20,29;UBERON:0002791,3.02e-20,29;UBERON:0001893,3.02e-20,29;UBERON:0003080,1.37e-19,40;UBERON:0002780,2.88e-18,39;UBERON:0001890,2.88e-18,39;UBERON:0006240,2.88e-18,39;UBERON:0010314,3.68e-17,92;UBERON:0002021,3.25e-15,10;UBERON:0000411,3.25e-15,10;UBERON:0001950,3.25e-15,10;UBERON:0000956,1.22e-13,21;UBERON:0001869,1.22e-13,21;UBERON:0000203,1.22e-13,21;UBERON:0002619,2.52e-13,17;UBERON:0002420,7.20e-08,8;UBERON:0007245,7.20e-08,8;UBERON:0010009,7.20e-08,8;UBERON:0010011,7.20e-08,8;UBERON:0000454,7.20e-08,8;UBERON:0000025,3.70e-07,114;UBERON:0003076,9.11e-07,12;UBERON:0003057,9.11e-07,12;UBERON:0000369,9.97e-07,5;UBERON:0002435,9.97e-07,5;UBERON:0000204,9.97e-07,5;UBERON:0010082,9.97e-07,5
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0.734187008646726,0,0,0,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.420649922702764,1.42825492201902,0.220868540951614,1.46988959057945,0.670918297127655,0.919218786610021,4.40463523997555,4.21368215681119,4.76180253094355,2.37395317914349,2.01272815925301,1.04182674111352,3.07101298901519,0.56276261003168,3.51435969886663,2.94628585473668,3.55929201997757,1.86399445825301,0.37863096666592,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,6.89036941262184,4.11750542536764,1.7591609295801,5.73620256634512,3.83573185995496,5.194701113989,5.19172041816825,0,0,0.252722758433675,0.631325567659422,0,0.459804208866946,1.98068342785884,1.20563854268572,2.51735046859913,2.0498195245576,1.59292931751539,3.10444044886819,0,0.378212160335639,0.879755620819744,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,4.6263788684108,2.05809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,3.98519734413491,1.47541450839008,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.790575555893047,4.17717711348349,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,1.36175842301515,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0,0,0.220528398054962,2.30840754118072,0.484393280087717,0.361877549568935,0.477489376012546,0.820704498725306,0.291480836629851,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.675824501963113,0.352071715937262,0.781226309063701,1.15345278868282,0.724752362478018,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,5.9842280745933,3.43737308063638,3.60891682921744,3.42541259885321,6.0431511791176,3.37511250115903,4.5032120322422,4.53142408984205,7.7664046762773,0.207574695168353,1.59609949360412,1.02440163452481,2.67417388775123,2.09613162627982,1.10306105070008,1.11123363900808,1.44224540067226,1.28367683836726,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.448176066834085,0.861532034334199,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.846146078916765,1.46342378298218,0.263069711437843,0.814824683075171,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.619747364743864,0.192906610981141,1.74867404556562,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00717454380462,0.506884656097573,0.734187008646726,0,0,0,0.58328969722285,0,0,0,0,0,0.257259436035947,0.286533439938757,0,1.82084814773638,2.64495489636016,5.70448263155561,0,0,0,0,0,0,0,1.14058573539325,0.675029691658453,0.420649922702764,1.42825492201902,0.220868540951614,1.46988959057945,0.670918297127655,0.919218786610021,4.40463523997555,4.21368215681119,4.76180253094355,2.37395317914349,2.01272815925301,1.04182674111352,3.07101298901519,0.56276261003168,3.51435969886663,2.94628585473668,3.55929201997757,1.86399445825301,0.37863096666592,0.302286240427142,0.579728977403356,0,0,0,0,0,0.280888840263504,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0,0.11418387971906,0,0.593768556259299,0,0,0,0,0.23517741427141,0.125666591329675,0,0.144599356919912,0,0,0,0,0,1.46390398505774,0.41889341362691,0,0,0,0,6.89036941262184,4.11750542536764,1.7591609295801,5.73620256634512,3.83573185995496,5.194701113989,5.19172041816825,0,0,0.252722758433675,0.631325567659422,0,0.459804208866946,1.98068342785884,1.20563854268572,2.51735046859913,2.0498195245576,1.59292931751539,3.10444044886819,0,0.378212160335639,0.879755620819744,0,0,0.348252166522167,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0,0.16455984991348,0,0,0,0,0,4.6263788684108,2.05809224758569,0,0,0,0,0,0,0,0,0,0.329397909448022,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,3.98519734413491,1.47541450839008,0,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0.566153061577665,0,0.584511715822624,0.790575555893047,4.17717711348349,0.425820255624806,0,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,1.36175842301515,0.18006109403131,0.258717367565509,0.428674070063185,0.709360934569094,0.891844088010353,0.329098041204242,0.608929898229199,0,0,0.220528398054962,2.30840754118072,0.484393280087717,0.361877549568935,0.477489376012546,0.820704498725306,0.291480836629851,5.7481843623258,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.675824501963113,0.352071715937262,0.781226309063701,1.15345278868282,0.724752362478018,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0,0.201652370273681,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,2.82375921308533,5.9842280745933,3.43737308063638,3.60891682921744,3.42541259885321,6.0431511791176,3.37511250115903,4.5032120322422,4.53142408984205,7.7664046762773,0.207574695168353,1.59609949360412,1.02440163452481,2.67417388775123,2.09613162627982,1.10306105070008,1.11123363900808,1.44224540067226,1.28367683836726,0.758091635291392,0.50695859978048,0.565879024158229,0.655490552289177,0.448176066834085,0.861532034334199,0.952587382566147,0.579421629724277,0.192909220463705,0.824171801606613,0.588795680537589,1.71434626192708,0.177475806159338,0.476872379894642,0.436039249896986,0.470546902076653,0.846146078916765,1.46342378298218,0.263069711437843,0.814824683075171,1.68342681497322,0.949080144993393,0.689531376628944,0.409231043169689,0.619747364743864,0.192906610981141,1.74867404556562,0.233931608445408,0.429742108096597,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p6@Pak3
}}
}}

Latest revision as of 16:01, 1 October 2015

Short description:p6@Pak3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_6_at_Pak3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -62bp_to_ENSMUST00000033640, ENSMUST00000070348, NM_001195048, uc009umg.2_5end
EntrezGene:Pak3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p6@Pak3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.76
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.82
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.14
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.68
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.47
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.67
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.37
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.01
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.89
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F11.76
cortex, adult.CNhs10473.12-14D55.74
cortex, neonate N30.CNhs11107.1392-42F23.84
diencephalon, adult.CNhs10482.20-12F25.19
diencephalon, neonate N30.CNhs11201.1388-42B25.19
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.52
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E84.63
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C25.46
medulla oblongata, neonate N30.CNhs11200.1396-42A33.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.48
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.48
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C95.75
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D91.15
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.61
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A43.43
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D22.67
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.46
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.61e-1423
neuroblast (sensu Vertebrata)4.61e-1423
neuron1.35e-0933
neuronal stem cell1.35e-0933
neuroblast1.35e-0933
electrically signaling cell1.35e-0933
electrically responsive cell2.72e-0839
electrically active cell2.72e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.40e-2854
neurectoderm3.93e-2864
neural plate3.93e-2864
presumptive neural plate3.93e-2864
central nervous system2.29e-2773
ectoderm-derived structure3.36e-2795
ectoderm3.36e-2795
presumptive ectoderm3.36e-2795
nervous system2.61e-2675
ecto-epithelium3.26e-2673
neural tube8.15e-2652
neural rod8.15e-2652
future spinal cord8.15e-2652
neural keel8.15e-2652
gray matter1.04e-2334
pre-chordal neural plate1.45e-2349
brain3.79e-2247
future brain3.79e-2247
regional part of brain6.09e-2146
brain grey matter3.02e-2029
regional part of telencephalon3.02e-2029
telencephalon3.02e-2029
anterior neural tube1.37e-1940
regional part of forebrain2.88e-1839
forebrain2.88e-1839
future forebrain2.88e-1839
structure with developmental contribution from neural crest3.68e-1792
occipital lobe3.25e-1510
visual cortex3.25e-1510
neocortex3.25e-1510
cerebral cortex1.22e-1321
cerebral hemisphere1.22e-1321
pallium1.22e-1321
regional part of cerebral cortex2.52e-1317
basal ganglion7.20e-088
nuclear complex of neuraxis7.20e-088
aggregate regional part of brain7.20e-088
collection of basal ganglia7.20e-088
cerebral subcortex7.20e-088
tube3.70e-07114
posterior neural tube9.11e-0712
chordal neural plate9.11e-0712
corpus striatum9.97e-075
striatum9.97e-075
ventral part of telencephalon9.97e-075
future corpus striatum9.97e-075
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:139953056..139953071,%2B&oldid=4310711"