FFCP PHASE1:Mm9::chr6:83136154..83136176,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:83136154..83136176,+
|short_description=p5@Dctn1
|description=CAGE_peak_5_at_Dctn1_5end
|association_with_transcript=214bp_to_ENSMUST00000113907_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=13191 | |EntrezGene=13191 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=16 | |||
|TSSclassifier=NA | |||
|UniProt=D3YX34 | |UniProt=D3YX34 | ||
|association_with_transcript=214bp_to_ENSMUST00000113907_5end | |||
|cluster_id=chr6:83136154..83136176,+ | |||
|description=CAGE_peak_5_at_Dctn1_5end | |||
|id=chr6:83136154..83136176,+ | |||
|ontology_enrichment_celltype=CL:0000117!6.22e-13!23;CL:0000337!6.22e-13!23;CL:0000540!2.77e-12!33;CL:0000047!2.77e-12!33;CL:0000031!2.77e-12!33;CL:0000404!2.77e-12!33;CL:0000393!6.28e-09!39;CL:0000211!6.28e-09!39;CL:0000221!2.61e-08!44;CL:0000133!2.61e-08!44;CL:0002319!8.68e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.73e-14,23;CL:0000337,2.73e-14,23;CL:0000540,7.13e-09,33;CL:0000047,7.13e-09,33;CL:0000031,7.13e-09,33;CL:0000404,7.13e-09,33;CL:0002614,3.22e-07,3;CL:0000393,5.49e-07,39;CL:0000211,5.49e-07,39;CL:0000221,9.30e-07,44;CL:0000133,9.30e-07,44;CL:0002610,9.47e-07,3;CL:0000120,9.89e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.14e-30!71;UBERON:0003075!2.14e-30!71;UBERON:0007284!2.14e-30!71;UBERON:0004121!6.64e-28!102;UBERON:0000924!6.64e-28!102;UBERON:0006601!6.64e-28!102;UBERON:0000033!1.78e-27!63;UBERON:0001017!3.42e-25!73;UBERON:0005743!3.42e-25!73;UBERON:0000073!1.05e-24!75;UBERON:0001016!1.05e-24!75;UBERON:0003056!8.69e-23!49;UBERON:0001049!4.29e-22!52;UBERON:0005068!4.29e-22!52;UBERON:0006241!4.29e-22!52;UBERON:0007135!4.29e-22!52;UBERON:0000955!1.85e-20!50;UBERON:0006238!1.85e-20!50;UBERON:0002616!7.56e-20!49;UBERON:0007811!5.59e-16!86;UBERON:0003080!7.54e-16!40;UBERON:0002780!3.97e-15!39;UBERON:0001890!3.97e-15!39;UBERON:0006240!3.97e-15!39;UBERON:0002020!9.37e-15!34;UBERON:0000153!1.41e-13!94;UBERON:0002791!3.98e-11!29;UBERON:0003528!3.98e-11!29;UBERON:0001893!3.98e-11!29;UBERON:0000970!3.05e-08!9;UBERON:0000019!3.05e-08!9;UBERON:0000047!3.05e-08!9;UBERON:0004088!3.05e-08!9;UBERON:0002104!3.05e-08!9;UBERON:0001456!3.05e-08!9;UBERON:0003072!3.05e-08!9;UBERON:0003071!3.05e-08!9;UBERON:0004128!3.05e-08!9;UBERON:0000020!3.25e-08!12;UBERON:0001032!3.25e-08!12;UBERON:0004456!3.25e-08!12;UBERON:0005085!2.81e-07!13;UBERON:0003076!5.67e-07!12;UBERON:0003057!5.67e-07!12;UBERON:0002420!6.94e-07!8;UBERON:0007245!6.94e-07!8;UBERON:0010009!6.94e-07!8;UBERON:0010011!6.94e-07!8;UBERON:0000454!6.94e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.66e-30,64;UBERON:0003075,2.66e-30,64;UBERON:0007284,2.66e-30,64;UBERON:0004121,2.79e-28,95;UBERON:0000924,2.79e-28,95;UBERON:0006601,2.79e-28,95;UBERON:0010371,3.86e-27,73;UBERON:0000073,4.56e-26,54;UBERON:0001017,1.00e-23,73;UBERON:0001049,3.52e-23,52;UBERON:0005068,3.52e-23,52;UBERON:0006241,3.52e-23,52;UBERON:0007135,3.52e-23,52;UBERON:0001016,7.42e-23,75;UBERON:0003056,3.39e-21,49;UBERON:0010314,1.26e-19,92;UBERON:0002616,7.16e-17,46;UBERON:0000955,2.22e-16,47;UBERON:0006238,2.22e-16,47;UBERON:0002020,1.85e-15,34;UBERON:0003080,3.11e-13,40;UBERON:0002780,3.80e-12,39;UBERON:0001890,3.80e-12,39;UBERON:0006240,3.80e-12,39;UBERON:0003076,8.02e-12,12;UBERON:0003057,8.02e-12,12;UBERON:0003528,8.46e-11,29;UBERON:0002791,8.46e-11,29;UBERON:0001893,8.46e-11,29;UBERON:0000970,3.73e-10,9;UBERON:0000019,3.73e-10,9;UBERON:0000047,3.73e-10,9;UBERON:0010312,3.73e-10,9;UBERON:0004088,3.73e-10,9;UBERON:0002104,3.73e-10,9;UBERON:0001456,3.73e-10,9;UBERON:0003072,3.73e-10,9;UBERON:0004128,3.73e-10,9;UBERON:0003071,3.73e-10,9;UBERON:0002021,5.90e-10,10;UBERON:0000411,5.90e-10,10;UBERON:0001950,5.90e-10,10;UBERON:0000020,2.52e-09,12;UBERON:0001032,2.52e-09,12;UBERON:0004456,2.52e-09,12;UBERON:0002950,1.07e-08,4;UBERON:0001891,1.07e-08,4;UBERON:0009616,1.07e-08,4;UBERON:0010286,1.07e-08,4;UBERON:0002240,1.51e-08,6;UBERON:0005174,1.51e-08,6;UBERON:0001137,1.51e-08,6;UBERON:0000033,1.73e-08,13;UBERON:0005085,1.73e-08,13;UBERON:0001444,4.42e-08,11;UBERON:0002038,3.22e-07,3;UBERON:0009663,3.22e-07,3;UBERON:0009661,3.22e-07,3;UBERON:0000125,3.22e-07,3;UBERON:0002308,3.22e-07,3;UBERON:0001948,7.10e-07,5;UBERON:0002315,7.10e-07,5;UBERON:0002619,9.39e-07,17;UBERON:0004684,9.47e-07,3;UBERON:0002275,9.47e-07,3 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82084814773638,3.70293685490423,2.53532561402472,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,4.57041575046086,3.09215957332259,0.61245399607477,0.191690942036473,0,6.60695285996332,2.17068474744819,2.15049146558741,0.923204014111357,1.18933936683133,0.52091337055676,3.07101298901519,5.6276261003168,3.51435969886663,0.589257170947335,2.56269025438385,2.05039390407831,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,1.40843419776681,0,0,0,0,0,0,0,0,0,0.173485326766136,0.304465478312141,0.691846491768175,0.452167921657868,0.352766121407114,0,0,0,0,0,0,0,0,1.17112318804619,1.67557365450764,0,0,0,0,1.79748767285787,0.915001205637253,1.38219787324151,3.30266208365325,2.04572365864264,1.45451631191692,2.27137768294861,0,0,0,2.10441855886474,0.910843100738926,1.37941262660084,1.62055916824814,0.90422890701429,2.38127747029647,4.09963904911519,4.77878795254617,12.4177617954728,0,0,0,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,1.68231958851302,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24770825982909,3.28192722458169,0,0,0.631016438832513,0,0.861693590931196,0,0,0.283076530788832,0,0.292255857911312,0.790575555893047,0.963963949265421,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0.340439605753788,0.900305470156551,0,1.28602221018955,0.354680467284547,0.356737635204141,1.15184314421485,0.913394847343798,0,0.21183207086382,0.220528398054962,0,0,0,0,0,0,2.41052892613663,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0,0.299033092087958,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501572104035363,2.25900737046827,2.30162618253588,1.71868654031819,1.3748254587495,1.37016503954128,1.5107877947794,1.35004500046361,0,0.906284817968409,1.03552062350364,1.14166082342594,2.39414924040619,1.36586884603307,0,0.628839487883947,1.10306105070008,0.222246727801615,0.618105171716683,1.28367683836726,0.252697211763798,0.50695859978048,0,0.37456602987953,0.384150914429216,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0.592302255241736,0.914639864363863,0.789209134313529,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0.309873682371932,0.385813221962283,1.24905288968973,0,0.644613162144895,0,0.441182838239031,0 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| ||
|short_description=p5@Dctn1 | |||
}} | }} |
Latest revision as of 19:04, 1 October 2015
Short description: | p5@Dctn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Dctn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:16 |
Association with transcript: | 214bp_to_ENSMUST00000113907_5end |
EntrezGene: | Dctn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.73e-14 | 23 |
neuroblast (sensu Vertebrata) | 2.73e-14 | 23 |
neuron | 7.13e-09 | 33 |
neuronal stem cell | 7.13e-09 | 33 |
neuroblast | 7.13e-09 | 33 |
electrically signaling cell | 7.13e-09 | 33 |
neuron of the substantia nigra | 3.22e-07 | 3 |
electrically responsive cell | 5.49e-07 | 39 |
electrically active cell | 5.49e-07 | 39 |
ectodermal cell | 9.30e-07 | 44 |
neurectodermal cell | 9.30e-07 | 44 |
raphe nuclei neuron | 9.47e-07 | 3 |
granule cell | 9.89e-07 | 3 |