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FFCP PHASE1:Mm9::chrX:56820525..56820545,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=14168
|EntrezGene=14168
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=B1AU21
|UniProt=B1AU21
|association_with_transcript=103bp_to_ENSMUST00000124402_5end
|association_with_transcript=103bp_to_ENSMUST00000124402_5end
|cluster_id=chrX:56820525..56820545,-
|description=CAGE_peak_4_at_Fgf13_5end
|description=CAGE_peak_4_at_Fgf13_5end
|id=chrX:56820525..56820545,-
|id=chrX:56820525..56820545,-
|ontology_enrichment_celltype=CL:0000540!1.15e-18!33;CL:0000047!1.15e-18!33;CL:0000031!1.15e-18!33;CL:0000404!1.15e-18!33;CL:0000117!6.83e-15!23;CL:0000337!6.83e-15!23;CL:0002319!7.57e-15!43;CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0000393!1.31e-12!39;CL:0000211!1.31e-12!39;CL:0000055!7.88e-10!50
|ontology_enrichment_celltype=CL:0000540!1.15e-18!33;CL:0000047!1.15e-18!33;CL:0000031!1.15e-18!33;CL:0000404!1.15e-18!33;CL:0000117!6.83e-15!23;CL:0000337!6.83e-15!23;CL:0002319!7.57e-15!43;CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0000393!1.31e-12!39;CL:0000211!1.31e-12!39;CL:0000055!7.88e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.87e-25,33;CL:0000047,1.87e-25,33;CL:0000031,1.87e-25,33;CL:0000404,1.87e-25,33;CL:0000117,2.40e-20,23;CL:0000337,2.40e-20,23;CL:0000393,1.70e-19,39;CL:0000211,1.70e-19,39;CL:0002319,1.71e-16,43;CL:0000221,7.79e-16,44;CL:0000133,7.79e-16,44;CL:0000107,2.39e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.74e-30!73;UBERON:0005743!2.74e-30!73;UBERON:0000073!6.79e-30!75;UBERON:0001016!6.79e-30!75;UBERON:0004121!2.59e-27!102;UBERON:0000924!2.59e-27!102;UBERON:0006601!2.59e-27!102;UBERON:0002346!1.13e-24!71;UBERON:0003075!1.13e-24!71;UBERON:0007284!1.13e-24!71;UBERON:0001049!1.95e-22!52;UBERON:0005068!1.95e-22!52;UBERON:0006241!1.95e-22!52;UBERON:0007135!1.95e-22!52;UBERON:0000033!5.37e-22!63;UBERON:0000955!2.13e-21!50;UBERON:0006238!2.13e-21!50;UBERON:0003056!1.04e-20!49;UBERON:0002616!1.28e-20!49;UBERON:0002020!4.34e-19!34;UBERON:0003080!1.13e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!7.14e-16!29;UBERON:0003528!7.14e-16!29;UBERON:0001893!7.14e-16!29;UBERON:0007811!2.09e-15!86;UBERON:0000153!3.94e-15!94;UBERON:0000956!1.69e-11!21;UBERON:0001869!1.69e-11!21;UBERON:0000203!1.69e-11!21;UBERON:0002619!1.90e-09!17
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.72e-34,73;UBERON:0001016,5.94e-33,75;UBERON:0002346,8.63e-31,64;UBERON:0003075,8.63e-31,64;UBERON:0007284,8.63e-31,64;UBERON:0004121,6.76e-30,95;UBERON:0000924,6.76e-30,95;UBERON:0006601,6.76e-30,95;UBERON:0000073,8.18e-27,54;UBERON:0010314,5.94e-26,92;UBERON:0001049,8.70e-25,52;UBERON:0005068,8.70e-25,52;UBERON:0006241,8.70e-25,52;UBERON:0007135,8.70e-25,52;UBERON:0010371,1.84e-24,73;UBERON:0002020,2.24e-24,34;UBERON:0003056,6.45e-22,49;UBERON:0000955,8.37e-21,47;UBERON:0006238,8.37e-21,47;UBERON:0003528,6.79e-20,29;UBERON:0002791,6.79e-20,29;UBERON:0001893,6.79e-20,29;UBERON:0002616,8.13e-20,46;UBERON:0003080,1.41e-18,40;UBERON:0002780,8.21e-18,39;UBERON:0001890,8.21e-18,39;UBERON:0006240,8.21e-18,39;UBERON:0000956,8.52e-14,21;UBERON:0001869,8.52e-14,21;UBERON:0000203,8.52e-14,21;UBERON:0002619,6.02e-11,17;UBERON:0002021,8.24e-09,10;UBERON:0000411,8.24e-09,10;UBERON:0001950,8.24e-09,10;UBERON:0000025,1.04e-08,114;UBERON:0002410,2.39e-07,9;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8;UBERON:0004111,4.07e-07,122;UBERON:0003076,8.61e-07,12;UBERON:0003057,8.61e-07,12
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.513602189793617,0.699363219351979,0,0,0,0.157731082679119,0.411343300817216,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.388859798148567,0,0,0,2.17608642603403,2.35265659399725,0,0,0,6.47412674750713,13.2247744818008,6.97214543856797,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,4.76972216618997,5.67024940993101,4.20649922702764,5.14171771926846,5.96345060569357,8.08439274818697,10.0637744569148,9.19218786610021,7.70811166995721,8.17198963745201,4.76180253094355,10.8146755938759,13.8146341839639,11.9810075228055,1.67509799400829,2.25105044012672,3.36156145108982,6.77645746589436,7.83044244395066,8.38797506213853,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0.255457055208591,0.239630249011841,0,0,5.39246301857362,4.57500602818627,8.04187853522332,4.69325664519146,2.55715457330331,10.1816141834184,5.51620294430376,0,0,0,0.841767423545896,1.43132487258974,2.5289231487682,2.34080768746954,2.10986744970001,3.12967896096108,2.562274405697,1.78033276663485,3.10444044886819,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,2.3674473558521,1.57411385397923,1.85120535464854,3.25547522650571,1.07309360559848,2.21854150497622,2.30383789878873,1.80584210487005,0.729619285912702,1.02339991197733,0.658650345873152,0.805238512562231,3.15434922846191,8.33527360272204,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,1.36474860983384,0,0.432276099749388,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.325929952884052,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.827810238914197,3.69266356971921,2.10981035865966,0,0,4.73262329124385,3.12350995437311,5.81643173878557,1.67278158566786,2.89638276307112,4.24614796183249,4.04810701674894,7.01414058987149,7.11518000303742,19.921921618152,0.141940085208269,0,0.81443479676788,0.164970122972535,0,0,0,0.754420319023592,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.905510786479282,1.50035924522115,1.41872186913819,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,2.96680483216816,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.419854356970974,0.967399816630967,0,0.316335993581135,0.203319467126849,0.756037385752609,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.15241361331,0.302478555410522,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0.428736758158132,0,10.7302850097243,6.90487854760765,8.02053718815155,5.84300819968538,2.74033007908257,5.2877572817279,4.72515750162264,4.5032120322422,5.43770890781046,2.5888015587591,1.14166082342594,1.59609949360412,1.87806966329548,1.45864030240976,2.72497111416377,1.65459157605013,2.00022055021454,0.824140228955577,1.28367683836726,2.02157769411038,1.77435509923168,1.50901073108861,1.591905626988,1.28050304809739,1.49332219284595,3.33405583898152,1.39061191133827,1.92909220463705,0.824171801606613,1.76638704161277,1.37147700954166,1.4198064492747,2.62279808942053,1.45346416632329,1.88218760830661,0.846146078916765,2.74391959309159,1.57841826862706,1.90125759384206,5.05028044491965,0.830445126869219,1.18205378850676,1.22769312950907,1.54936841185966,1.35034627686799,2.74791635731741,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.513602189793617,0.699363219351979,0,0,0,0.157731082679119,0.411343300817216,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.388859798148567,0,0,0,2.17608642603403,2.35265659399725,0,0,0,6.47412674750713,13.2247744818008,6.97214543856797,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,4.76972216618997,5.67024940993101,4.20649922702764,5.14171771926846,5.96345060569357,8.08439274818697,10.0637744569148,9.19218786610021,7.70811166995721,8.17198963745201,4.76180253094355,10.8146755938759,13.8146341839639,11.9810075228055,1.67509799400829,2.25105044012672,3.36156145108982,6.77645746589436,7.83044244395066,8.38797506213853,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0.255457055208591,0.239630249011841,0,0,5.39246301857362,4.57500602818627,8.04187853522332,4.69325664519146,2.55715457330331,10.1816141834184,5.51620294430376,0,0,0,0.841767423545896,1.43132487258974,2.5289231487682,2.34080768746954,2.10986744970001,3.12967896096108,2.562274405697,1.78033276663485,3.10444044886819,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,2.3674473558521,1.57411385397923,1.85120535464854,3.25547522650571,1.07309360559848,2.21854150497622,2.30383789878873,1.80584210487005,0.729619285912702,1.02339991197733,0.658650345873152,0.805238512562231,3.15434922846191,8.33527360272204,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,1.36474860983384,0,0.432276099749388,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.325929952884052,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.827810238914197,3.69266356971921,2.10981035865966,0,0,4.73262329124385,3.12350995437311,5.81643173878557,1.67278158566786,2.89638276307112,4.24614796183249,4.04810701674894,7.01414058987149,7.11518000303742,19.921921618152,0.141940085208269,0,0.81443479676788,0.164970122972535,0,0,0,0.754420319023592,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.905510786479282,1.50035924522115,1.41872186913819,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,2.96680483216816,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.419854356970974,0.967399816630967,0,0.316335993581135,0.203319467126849,0.756037385752609,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.15241361331,0.302478555410522,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0.428736758158132,0,10.7302850097243,6.90487854760765,8.02053718815155,5.84300819968538,2.74033007908257,5.2877572817279,4.72515750162264,4.5032120322422,5.43770890781046,2.5888015587591,1.14166082342594,1.59609949360412,1.87806966329548,1.45864030240976,2.72497111416377,1.65459157605013,2.00022055021454,0.824140228955577,1.28367683836726,2.02157769411038,1.77435509923168,1.50901073108861,1.591905626988,1.28050304809739,1.49332219284595,3.33405583898152,1.39061191133827,1.92909220463705,0.824171801606613,1.76638704161277,1.37147700954166,1.4198064492747,2.62279808942053,1.45346416632329,1.88218760830661,0.846146078916765,2.74391959309159,1.57841826862706,1.90125759384206,5.05028044491965,0.830445126869219,1.18205378850676,1.22769312950907,1.54936841185966,1.35034627686799,2.74791635731741,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264
|short_description=p4@Fgf13
|short_description=p4@Fgf13
}}
}}

Latest revision as of 22:27, 1 October 2015

Short description:p4@Fgf13
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Fgf13_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 103bp_to_ENSMUST00000124402_5end
EntrezGene:Fgf13
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Fgf13

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.35
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.47
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.67
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.08
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.06
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D37.71
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F413.81
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D811.98
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.39
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I25.66
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.39
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F18.04
cortex, adult.CNhs10473.12-14D54.69
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F210.18
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E22.53
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D42.11
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.04
heart, embryo E12.CNhs11015.353-12F51.64
heart, embryo E13.CNhs11013.376-3I91.80
heart, embryo E14.CNhs10597.403-26D42.37
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E32.22
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.73
heart, neonate N20.CNhs11127.821-26I61.02
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G18.34
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A51.36
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C23.69
medulla oblongata, neonate N30.CNhs11200.1396-42A32.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.73
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E35.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.90
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D94.25
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.01
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D67.12
olfactory brain, adult.CNhs10489.18-22I919.92
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C92.97
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.76
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.35
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.84
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A85.44
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.88
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F21.65
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system1.72e-3473
nervous system5.94e-3375
neurectoderm8.63e-3164
neural plate8.63e-3164
presumptive neural plate8.63e-3164
ectoderm-derived structure6.76e-3095
ectoderm6.76e-3095
presumptive ectoderm6.76e-3095
regional part of nervous system8.18e-2754
structure with developmental contribution from neural crest5.94e-2692
neural tube8.70e-2552
neural rod8.70e-2552
future spinal cord8.70e-2552
neural keel8.70e-2552
ecto-epithelium1.84e-2473
gray matter2.24e-2434
pre-chordal neural plate6.45e-2249
brain8.37e-2147
future brain8.37e-2147
brain grey matter6.79e-2029
regional part of telencephalon6.79e-2029
telencephalon6.79e-2029
regional part of brain8.13e-2046
anterior neural tube1.41e-1840
regional part of forebrain8.21e-1839
forebrain8.21e-1839
future forebrain8.21e-1839
cerebral cortex8.52e-1421
cerebral hemisphere8.52e-1421
pallium8.52e-1421
regional part of cerebral cortex6.02e-1117
occipital lobe8.24e-0910
visual cortex8.24e-0910
neocortex8.24e-0910
tube1.04e-08114
autonomic nervous system2.39e-079
basal ganglion2.56e-078
nuclear complex of neuraxis2.56e-078
aggregate regional part of brain2.56e-078
collection of basal ganglia2.56e-078
cerebral subcortex2.56e-078
anatomical conduit4.07e-07122
posterior neural tube8.61e-0712
chordal neural plate8.61e-0712
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