FFCP PHASE1:Mm9::chrX:56820525..56820545,-: Difference between revisions
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{{FFCP|EntrezGene=14168|HGNC=|MCL_coexpression_id=13|UniProt=B1AU21|association_with_transcript=103bp_to_ENSMUST00000124402_5end|description=CAGE_peak_4_at_Fgf13_5end|id=chrX:56820525..56820545,-|ontology_enrichment_celltype=CL:0000540!1.15e-18!33;CL:0000047!1.15e-18!33;CL:0000031!1.15e-18!33;CL:0000404!1.15e-18!33;CL:0000117!6.83e-15!23;CL:0000337!6.83e-15!23;CL:0002319!7.57e-15!43;CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0000393!1.31e-12!39;CL:0000211!1.31e-12!39;CL:0000055!7.88e-10!50|ontology_enrichment_celltype_v019_2=CL:0000540,1.87e-25,33;CL:0000047,1.87e-25,33;CL:0000031,1.87e-25,33;CL:0000404,1.87e-25,33;CL:0000117,2.40e-20,23;CL:0000337,2.40e-20,23;CL:0000393,1.70e-19,39;CL:0000211,1.70e-19,39;CL:0002319,1.71e-16,43;CL:0000221,7.79e-16,44;CL:0000133,7.79e-16,44;CL:0000107,2.39e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.74e-30!73;UBERON:0005743!2.74e-30!73;UBERON:0000073!6.79e-30!75;UBERON:0001016!6.79e-30!75;UBERON:0004121!2.59e-27!102;UBERON:0000924!2.59e-27!102;UBERON:0006601!2.59e-27!102;UBERON:0002346!1.13e-24!71;UBERON:0003075!1.13e-24!71;UBERON:0007284!1.13e-24!71;UBERON:0001049!1.95e-22!52;UBERON:0005068!1.95e-22!52;UBERON:0006241!1.95e-22!52;UBERON:0007135!1.95e-22!52;UBERON:0000033!5.37e-22!63;UBERON:0000955!2.13e-21!50;UBERON:0006238!2.13e-21!50;UBERON:0003056!1.04e-20!49;UBERON:0002616!1.28e-20!49;UBERON:0002020!4.34e-19!34;UBERON:0003080!1.13e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!7.14e-16!29;UBERON:0003528!7.14e-16!29;UBERON:0001893!7.14e-16!29;UBERON:0007811!2.09e-15!86;UBERON:0000153!3.94e-15!94;UBERON:0000956!1.69e-11!21;UBERON:0001869!1.69e-11!21;UBERON:0000203!1.69e-11!21;UBERON:0002619!1.90e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.72e-34,73;UBERON:0001016,5.94e-33,75;UBERON:0002346,8.63e-31,64;UBERON:0003075,8.63e-31,64;UBERON:0007284,8.63e-31,64;UBERON:0004121,6.76e-30,95;UBERON:0000924,6.76e-30,95;UBERON:0006601,6.76e-30,95;UBERON:0000073,8.18e-27,54;UBERON:0010314,5.94e-26,92;UBERON:0001049,8.70e-25,52;UBERON:0005068,8.70e-25,52;UBERON:0006241,8.70e-25,52;UBERON:0007135,8.70e-25,52;UBERON:0010371,1.84e-24,73;UBERON:0002020,2.24e-24,34;UBERON:0003056,6.45e-22,49;UBERON:0000955,8.37e-21,47;UBERON:0006238,8.37e-21,47;UBERON:0003528,6.79e-20,29;UBERON:0002791,6.79e-20,29;UBERON:0001893,6.79e-20,29;UBERON:0002616,8.13e-20,46;UBERON:0003080,1.41e-18,40;UBERON:0002780,8.21e-18,39;UBERON:0001890,8.21e-18,39;UBERON:0006240,8.21e-18,39;UBERON:0000956,8.52e-14,21;UBERON:0001869,8.52e-14,21;UBERON:0000203,8.52e-14,21;UBERON:0002619,6.02e-11,17;UBERON:0002021,8.24e-09,10;UBERON:0000411,8.24e-09,10;UBERON:0001950,8.24e-09,10;UBERON:0000025,1.04e-08,114;UBERON:0002410,2.39e-07,9;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8;UBERON:0004111,4.07e-07,122;UBERON:0003076,8.61e-07,12;UBERON:0003057,8.61e-07,12|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.513602189793617,0.699363219351979,0,0,0,0.157731082679119,0.411343300817216,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.388859798148567,0,0,0,2.17608642603403,2.35265659399725,0,0,0,6.47412674750713,13.2247744818008,6.97214543856797,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,4.76972216618997,5.67024940993101,4.20649922702764,5.14171771926846,5.96345060569357,8.08439274818697,10.0637744569148,9.19218786610021,7.70811166995721,8.17198963745201,4.76180253094355,10.8146755938759,13.8146341839639,11.9810075228055,1.67509799400829,2.25105044012672,3.36156145108982,6.77645746589436,7.83044244395066,8.38797506213853,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0.255457055208591,0.239630249011841,0,0,5.39246301857362,4.57500602818627,8.04187853522332,4.69325664519146,2.55715457330331,10.1816141834184,5.51620294430376,0,0,0,0.841767423545896,1.43132487258974,2.5289231487682,2.34080768746954,2.10986744970001,3.12967896096108,2.562274405697,1.78033276663485,3.10444044886819,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,2.3674473558521,1.57411385397923,1.85120535464854,3.25547522650571,1.07309360559848,2.21854150497622,2.30383789878873,1.80584210487005,0.729619285912702,1.02339991197733,0.658650345873152,0.805238512562231,3.15434922846191,8.33527360272204,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14168 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=B1AU21 | |||
|association_with_transcript=103bp_to_ENSMUST00000124402_5end | |||
|cluster_id=chrX:56820525..56820545,- | |||
|description=CAGE_peak_4_at_Fgf13_5end | |||
|id=chrX:56820525..56820545,- | |||
|ontology_enrichment_celltype=CL:0000540!1.15e-18!33;CL:0000047!1.15e-18!33;CL:0000031!1.15e-18!33;CL:0000404!1.15e-18!33;CL:0000117!6.83e-15!23;CL:0000337!6.83e-15!23;CL:0002319!7.57e-15!43;CL:0000221!1.31e-14!44;CL:0000133!1.31e-14!44;CL:0000393!1.31e-12!39;CL:0000211!1.31e-12!39;CL:0000055!7.88e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.87e-25,33;CL:0000047,1.87e-25,33;CL:0000031,1.87e-25,33;CL:0000404,1.87e-25,33;CL:0000117,2.40e-20,23;CL:0000337,2.40e-20,23;CL:0000393,1.70e-19,39;CL:0000211,1.70e-19,39;CL:0002319,1.71e-16,43;CL:0000221,7.79e-16,44;CL:0000133,7.79e-16,44;CL:0000107,2.39e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.74e-30!73;UBERON:0005743!2.74e-30!73;UBERON:0000073!6.79e-30!75;UBERON:0001016!6.79e-30!75;UBERON:0004121!2.59e-27!102;UBERON:0000924!2.59e-27!102;UBERON:0006601!2.59e-27!102;UBERON:0002346!1.13e-24!71;UBERON:0003075!1.13e-24!71;UBERON:0007284!1.13e-24!71;UBERON:0001049!1.95e-22!52;UBERON:0005068!1.95e-22!52;UBERON:0006241!1.95e-22!52;UBERON:0007135!1.95e-22!52;UBERON:0000033!5.37e-22!63;UBERON:0000955!2.13e-21!50;UBERON:0006238!2.13e-21!50;UBERON:0003056!1.04e-20!49;UBERON:0002616!1.28e-20!49;UBERON:0002020!4.34e-19!34;UBERON:0003080!1.13e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!7.14e-16!29;UBERON:0003528!7.14e-16!29;UBERON:0001893!7.14e-16!29;UBERON:0007811!2.09e-15!86;UBERON:0000153!3.94e-15!94;UBERON:0000956!1.69e-11!21;UBERON:0001869!1.69e-11!21;UBERON:0000203!1.69e-11!21;UBERON:0002619!1.90e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.72e-34,73;UBERON:0001016,5.94e-33,75;UBERON:0002346,8.63e-31,64;UBERON:0003075,8.63e-31,64;UBERON:0007284,8.63e-31,64;UBERON:0004121,6.76e-30,95;UBERON:0000924,6.76e-30,95;UBERON:0006601,6.76e-30,95;UBERON:0000073,8.18e-27,54;UBERON:0010314,5.94e-26,92;UBERON:0001049,8.70e-25,52;UBERON:0005068,8.70e-25,52;UBERON:0006241,8.70e-25,52;UBERON:0007135,8.70e-25,52;UBERON:0010371,1.84e-24,73;UBERON:0002020,2.24e-24,34;UBERON:0003056,6.45e-22,49;UBERON:0000955,8.37e-21,47;UBERON:0006238,8.37e-21,47;UBERON:0003528,6.79e-20,29;UBERON:0002791,6.79e-20,29;UBERON:0001893,6.79e-20,29;UBERON:0002616,8.13e-20,46;UBERON:0003080,1.41e-18,40;UBERON:0002780,8.21e-18,39;UBERON:0001890,8.21e-18,39;UBERON:0006240,8.21e-18,39;UBERON:0000956,8.52e-14,21;UBERON:0001869,8.52e-14,21;UBERON:0000203,8.52e-14,21;UBERON:0002619,6.02e-11,17;UBERON:0002021,8.24e-09,10;UBERON:0000411,8.24e-09,10;UBERON:0001950,8.24e-09,10;UBERON:0000025,1.04e-08,114;UBERON:0002410,2.39e-07,9;UBERON:0002420,2.56e-07,8;UBERON:0007245,2.56e-07,8;UBERON:0010009,2.56e-07,8;UBERON:0010011,2.56e-07,8;UBERON:0000454,2.56e-07,8;UBERON:0004111,4.07e-07,122;UBERON:0003076,8.61e-07,12;UBERON:0003057,8.61e-07,12 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.234064526321993,0.171217968225505,0.239316476986009,0.513602189793617,0.699363219351979,0,0,0,0.157731082679119,0.411343300817216,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.878744730937887,0.388859798148567,0,0,0,2.17608642603403,2.35265659399725,0,0,0,6.47412674750713,13.2247744818008,6.97214543856797,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,4.76972216618997,5.67024940993101,4.20649922702764,5.14171771926846,5.96345060569357,8.08439274818697,10.0637744569148,9.19218786610021,7.70811166995721,8.17198963745201,4.76180253094355,10.8146755938759,13.8146341839639,11.9810075228055,1.67509799400829,2.25105044012672,3.36156145108982,6.77645746589436,7.83044244395066,8.38797506213853,0.227178579999552,0.453429360640713,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0.22836775943812,2.58937883647172,0.148442139064825,0.520455980298408,0.304465478312141,0,0.753613202763113,0.352766121407114,0,0,0,0,0.161766849947409,0,0,0,6.14839673724249,5.65506108396329,0.255457055208591,0.239630249011841,0,0,5.39246301857362,4.57500602818627,8.04187853522332,4.69325664519146,2.55715457330331,10.1816141834184,5.51620294430376,0,0,0,0.841767423545896,1.43132487258974,2.5289231487682,2.34080768746954,2.10986744970001,3.12967896096108,2.562274405697,1.78033276663485,3.10444044886819,0.215567992932842,0.378212160335639,1.05570674498369,0.219195732427575,0.834141747676794,0,0.205782136407943,0.398068533636986,0,0,0,1.03562886267751,1.64168241986767,1.80062061461015,2.3674473558521,1.57411385397923,1.85120535464854,3.25547522650571,1.07309360559848,2.21854150497622,2.30383789878873,1.80584210487005,0.729619285912702,1.02339991197733,0.658650345873152,0.805238512562231,3.15434922846191,8.33527360272204,0,0,0.426576501070468,1.16118335930219,0.644337306610467,0.201683524623343,0.22237804384487,0,0,0.164698954724011,0,0.198956472041151,1.36474860983384,0,0.432276099749388,0,0,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0,0.757965647081939,0.325929952884052,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0.491764273019036,0.827810238914197,3.69266356971921,2.10981035865966,0,0,4.73262329124385,3.12350995437311,5.81643173878557,1.67278158566786,2.89638276307112,4.24614796183249,4.04810701674894,7.01414058987149,7.11518000303742,19.921921618152,0.141940085208269,0,0.81443479676788,0.164970122972535,0,0,0,0.754420319023592,0,0,0.516856586336442,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.720244376125241,0.905510786479282,1.50035924522115,1.41872186913819,1.07021290561242,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0.16488625294148,0.322928853391811,0.180938774784468,0.119372344003136,0.328281799490123,0.291480836629851,2.96680483216816,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0,0.509935289981566,0.419854356970974,0.967399816630967,0,0.316335993581135,0.203319467126849,0.756037385752609,0.418176592028937,0,0.539457385539283,0.41326727862668,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0.13020438484395,0,0,0,0.948033361884535,0.202725215290164,0.308132871494482,0,0.179026695667481,0.198681354781265,0,0,0.302899349844443,0.15241361331,0.302478555410522,0.38983152295901,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0.36630324853453,0.428736758158132,0,10.7302850097243,6.90487854760765,8.02053718815155,5.84300819968538,2.74033007908257,5.2877572817279,4.72515750162264,4.5032120322422,5.43770890781046,2.5888015587591,1.14166082342594,1.59609949360412,1.87806966329548,1.45864030240976,2.72497111416377,1.65459157605013,2.00022055021454,0.824140228955577,1.28367683836726,2.02157769411038,1.77435509923168,1.50901073108861,1.591905626988,1.28050304809739,1.49332219284595,3.33405583898152,1.39061191133827,1.92909220463705,0.824171801606613,1.76638704161277,1.37147700954166,1.4198064492747,2.62279808942053,1.45346416632329,1.88218760830661,0.846146078916765,2.74391959309159,1.57841826862706,1.90125759384206,5.05028044491965,0.830445126869219,1.18205378850676,1.22769312950907,1.54936841185966,1.35034627686799,2.74791635731741,0.935726433781634,0.644613162144895,0.57386499620653,0.220591419119515,0.695603506861264 | |||
|short_description=p4@Fgf13 | |||
}} |
Latest revision as of 22:27, 1 October 2015
Short description: | p4@Fgf13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Fgf13_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 103bp_to_ENSMUST00000124402_5end |
EntrezGene: | Fgf13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.87e-25 | 33 |
neuronal stem cell | 1.87e-25 | 33 |
neuroblast | 1.87e-25 | 33 |
electrically signaling cell | 1.87e-25 | 33 |
CNS neuron (sensu Vertebrata) | 2.40e-20 | 23 |
neuroblast (sensu Vertebrata) | 2.40e-20 | 23 |
electrically responsive cell | 1.70e-19 | 39 |
electrically active cell | 1.70e-19 | 39 |
neural cell | 1.71e-16 | 43 |
ectodermal cell | 7.79e-16 | 44 |
neurectodermal cell | 7.79e-16 | 44 |
autonomic neuron | 2.39e-07 | 9 |