FFCP PHASE1:Mm9::chrX:7305625..7305636,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54637 | |EntrezGene=54637 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9JIG8,A2AEV6 | |UniProt=Q9JIG8,A2AEV6 | ||
|association_with_transcript=60bp_to_,-60bp_to_ENSMUST00000033489,NM_138602,uc009sme.1_5end | |association_with_transcript=60bp_to_,-60bp_to_ENSMUST00000033489,NM_138602,uc009sme.1_5end | ||
|cluster_id=chrX:7305625..7305636,+ | |||
|description=CAGE_peak_3_at_Praf2_5end | |description=CAGE_peak_3_at_Praf2_5end | ||
|id=chrX:7305625..7305636,+ | |id=chrX:7305625..7305636,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.15e-14!43;CL:0000055!3.32e-14!50;CL:0000221!3.73e-14!44;CL:0000133!3.73e-14!44;CL:0000117!1.25e-12!23;CL:0000337!1.25e-12!23;CL:0000393!4.42e-11!39;CL:0000211!4.42e-11!39;CL:0002321!1.19e-10!70;CL:0000220!1.19e-10!70;CL:0000540!3.15e-10!33;CL:0000047!3.15e-10!33;CL:0000031!3.15e-10!33;CL:0000404!3.15e-10!33;CL:0000548!4.90e-07!115;CL:0000004!4.90e-07!115;CL:0000255!4.90e-07!115 | |ontology_enrichment_celltype=CL:0002319!3.15e-14!43;CL:0000055!3.32e-14!50;CL:0000221!3.73e-14!44;CL:0000133!3.73e-14!44;CL:0000117!1.25e-12!23;CL:0000337!1.25e-12!23;CL:0000393!4.42e-11!39;CL:0000211!4.42e-11!39;CL:0002321!1.19e-10!70;CL:0000220!1.19e-10!70;CL:0000540!3.15e-10!33;CL:0000047!3.15e-10!33;CL:0000031!3.15e-10!33;CL:0000404!3.15e-10!33;CL:0000548!4.90e-07!115;CL:0000004!4.90e-07!115;CL:0000255!4.90e-07!115 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.43e-18,23;CL:0000337,1.43e-18,23;CL:0002319,3.18e-18,43;CL:0000221,1.59e-17,44;CL:0000133,1.59e-17,44;CL:0002321,2.68e-13,70;CL:0000540,2.69e-12,33;CL:0000047,2.69e-12,33;CL:0000031,2.69e-12,33;CL:0000404,2.69e-12,33;CL:0000393,4.40e-12,39;CL:0000211,4.40e-12,39;CL:0000333,3.72e-07,10;CL:0000095,3.72e-07,10;CL:0000243,3.72e-07,10;CL:0000123,3.72e-07,10;CL:0000125,3.72e-07,10;CL:0000030,3.72e-07,10;CL:0000339,3.72e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.61e-26!75;UBERON:0001016!7.61e-26!75;UBERON:0001017!5.59e-25!73;UBERON:0005743!5.59e-25!73;UBERON:0001049!9.91e-21!52;UBERON:0005068!9.91e-21!52;UBERON:0006241!9.91e-21!52;UBERON:0007135!9.91e-21!52;UBERON:0000955!2.53e-19!50;UBERON:0006238!2.53e-19!50;UBERON:0002616!8.03e-19!49;UBERON:0002020!1.52e-18!34;UBERON:0000033!6.73e-17!63;UBERON:0004121!2.16e-16!102;UBERON:0000924!2.16e-16!102;UBERON:0006601!2.16e-16!102;UBERON:0002346!2.52e-15!71;UBERON:0003075!2.52e-15!71;UBERON:0007284!2.52e-15!71;UBERON:0002791!2.52e-15!29;UBERON:0003528!2.52e-15!29;UBERON:0001893!2.52e-15!29;UBERON:0003080!2.11e-14!40;UBERON:0000153!5.26e-14!94;UBERON:0002780!7.16e-14!39;UBERON:0001890!7.16e-14!39;UBERON:0006240!7.16e-14!39;UBERON:0003056!1.82e-13!49;UBERON:0007811!1.29e-12!86;UBERON:0000956!2.57e-11!21;UBERON:0001869!2.57e-11!21;UBERON:0000203!2.57e-11!21;UBERON:0002619!6.90e-10!17;UBERON:0003076!3.51e-07!12;UBERON:0003057!3.51e-07!12;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10 | |ontology_enrichment_uberon=UBERON:0000073!7.61e-26!75;UBERON:0001016!7.61e-26!75;UBERON:0001017!5.59e-25!73;UBERON:0005743!5.59e-25!73;UBERON:0001049!9.91e-21!52;UBERON:0005068!9.91e-21!52;UBERON:0006241!9.91e-21!52;UBERON:0007135!9.91e-21!52;UBERON:0000955!2.53e-19!50;UBERON:0006238!2.53e-19!50;UBERON:0002616!8.03e-19!49;UBERON:0002020!1.52e-18!34;UBERON:0000033!6.73e-17!63;UBERON:0004121!2.16e-16!102;UBERON:0000924!2.16e-16!102;UBERON:0006601!2.16e-16!102;UBERON:0002346!2.52e-15!71;UBERON:0003075!2.52e-15!71;UBERON:0007284!2.52e-15!71;UBERON:0002791!2.52e-15!29;UBERON:0003528!2.52e-15!29;UBERON:0001893!2.52e-15!29;UBERON:0003080!2.11e-14!40;UBERON:0000153!5.26e-14!94;UBERON:0002780!7.16e-14!39;UBERON:0001890!7.16e-14!39;UBERON:0006240!7.16e-14!39;UBERON:0003056!1.82e-13!49;UBERON:0007811!1.29e-12!86;UBERON:0000956!2.57e-11!21;UBERON:0001869!2.57e-11!21;UBERON:0000203!2.57e-11!21;UBERON:0002619!6.90e-10!17;UBERON:0003076!3.51e-07!12;UBERON:0003057!3.51e-07!12;UBERON:0002021!4.17e-07!10;UBERON:0000411!4.17e-07!10;UBERON:0001950!4.17e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.14e-33,75;UBERON:0001017,7.97e-32,73;UBERON:0000073,3.07e-30,54;UBERON:0001049,3.63e-28,52;UBERON:0005068,3.63e-28,52;UBERON:0006241,3.63e-28,52;UBERON:0007135,3.63e-28,52;UBERON:0002020,1.10e-27,34;UBERON:0004121,2.45e-25,95;UBERON:0000924,2.45e-25,95;UBERON:0006601,2.45e-25,95;UBERON:0002346,5.37e-25,64;UBERON:0003075,5.37e-25,64;UBERON:0007284,5.37e-25,64;UBERON:0000955,3.32e-23,47;UBERON:0006238,3.32e-23,47;UBERON:0003528,1.01e-22,29;UBERON:0002791,1.01e-22,29;UBERON:0001893,1.01e-22,29;UBERON:0002616,1.81e-22,46;UBERON:0010371,9.96e-20,73;UBERON:0003080,1.13e-18,40;UBERON:0002780,6.95e-18,39;UBERON:0001890,6.95e-18,39;UBERON:0006240,6.95e-18,39;UBERON:0003056,8.03e-17,49;UBERON:0000956,1.49e-16,21;UBERON:0001869,1.49e-16,21;UBERON:0000203,1.49e-16,21;UBERON:0002619,2.34e-14,17;UBERON:0010314,7.27e-14,92;UBERON:0003076,3.32e-10,12;UBERON:0003057,3.32e-10,12;UBERON:0002021,4.31e-10,10;UBERON:0000411,4.31e-10,10;UBERON:0001950,4.31e-10,10;UBERON:0002420,2.72e-07,8;UBERON:0007245,2.72e-07,8;UBERON:0010009,2.72e-07,8;UBERON:0010011,2.72e-07,8;UBERON:0000454,2.72e-07,8;UBERON:0002240,6.31e-07,6;UBERON:0005174,6.31e-07,6;UBERON:0001137,6.31e-07,6;UBERON:0000025,8.61e-07,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0.671517087647559,0.934450562382103,0.645616617207881,0.281577444303333,0.234064526321993,0.856089841127525,0.558405112967355,0,0.262261207256992,0,0,0,0,0.411343300817216,0,0.255129870453209,0.397163804803541,0.783599367416806,0.47997726838022,0.91763712426868,1.14846392823004,0,0.861884930743556,0.190023419456374,0,0.886922042621219,0.635030673459631,0.61506478758457,15.8481681015439,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,1.38486499773135,0.912392380975631,0.734187008646726,1.56478268869608,2.18025156380447,2.63623419281366,4.47188767870852,1.67983705950435,1.43752564364972,0.503347818173209,0,0,3.08711323243136,1.43266719969378,0.515672092277442,3.84401275633236,6.87688273053643,2.53532561402472,1.0165335962074,2.66788438833342,2.6996991518442,0.988866362566974,1.4209602298922,1.49800055259202,2.68952813725088,1.76272340924412,1.4850653216486,1.26194976810829,8.2838785477103,5.52171352379034,1.34739879136449,1.43768206527355,2.75765635983006,5.50579404996943,3.70293280447044,5.22262213071228,3.16527090552465,3.01909223887952,1.56274011167028,8.93385596804419,3.37657566019008,1.98637722109853,7.36571463684169,5.41012387036591,2.23679334990361,1.51452386666368,1.66257432234928,0.579728977403356,0,0,0,0.649776417447669,0,0.421333260395256,2.21559419351475,3.63700406444016,1.06001872353102,0.704217098883403,1.28326477414318,2.54805239706646,7.11066703153331,1.08245520505607,1.26679932737549,1.01104889002957,0,1.8125651855302,0.148442139064825,0.346970653532272,0,0.230615497256059,0.452167921657868,0.705532242814229,0,0,0,0,0.970601099684455,0.220841518460394,0.969750506270444,0,1.17112318804619,1.8850203613211,0,0.599075622529601,1.19980546198682,0.635351135365324,3.14560342750128,3.20250421973039,2.01046963380583,4.69325664519146,3.3243009452943,2.49345653471472,2.27137768294861,0.712875546952214,0.373220911830279,0.252722758433675,0.210441855886474,0.780722657776222,1.37941262660084,1.0803727788321,1.05493372485001,0.272145996605311,0.384341160854549,0.468508622798644,1.55222022443409,1.94011193639558,1.32374256117473,0.527853372491847,1.53437012699302,0.556094498451196,1.0447564995665,0.61734640922383,0.995171334092466,0,0.257347907114715,0,0.621377317606506,0.469052119962192,0.900310307305074,0.23674473558521,0.590292695242212,0.462801338662135,0.465067889500816,0.536546802799238,0,0.16455984991348,0,0.162137619091711,0.146199987425332,0,0.134206418760372,3.99550902271842,1.44066457330998,0.660837565967596,0.528901133327089,0,0.464473343720877,0.644337306610467,0.403367049246685,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0,0.58489226135736,0.898819408654221,0,0.597423819763102,1.13800740571849,0.571242563048644,0,1.01825663922657,0.775809948670503,0.350679099451593,0.189709611372772,0.147610147979602,0,0.123397163921801,0.296452627087149,0.333690211432188,0.196558995113203,0.224862112384854,0,0.482354319504834,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.568474235311454,1.30371981153621,0.509235257325564,0.938760993154008,0.670025029767263,0.238043640886014,0.390267295715598,0.157635144106191,0.44292937929755,0.318909537314974,0.327726629431476,0.345369963731791,0.144649058581512,0,0,0,0.275936746304732,3.05046120976805,2.93029216480508,1.47541450839008,0.252470927204373,0.631016438832513,0,1.29254038639679,0.477937595905104,0.668396022247182,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,2.57057053137446,0.567760340833074,0.712262414669021,0.325773918707152,0.824850614862677,0,0.242780636154981,0.302323556964751,1.13163047853539,0.295301892880773,0.614870295887855,0,0,0,0,0,0,0.680879211507576,0.18006109403131,0.517434735131018,0.643011105094777,0.354680467284547,0.891844088010353,0.493647061806363,1.2178597964584,0.704015124191131,1.69465656691056,0,0.16488625294148,0.322928853391811,0.301564624640779,0.238744688006273,0,0,3.33765543618917,0,0.619160603889667,0.555583582109135,0,0,0,0.849892149969277,0.139951452323658,0.276399947608848,0,0.949007980743406,0.813277868507395,0.540026704109006,0.627264888043406,0.655087691238533,0.134864346384821,0.41326727862668,0,0,0,0,0.448549638131936,0.165458490457098,0.777804753376191,1.42075805825504,1.01373675294467,0.469428954583016,0.5208175393758,0.209718688851422,0,0,0,1.41907650703115,1.1298205288131,0.129920822977795,0.895133478337407,0.993406773906324,0.240390899039938,0.295379054349154,0.201932899896295,0.228620419965,0.201652370273681,0.292373642219257,0.288635524920988,0.350630706544707,0.453460767230423,6.21560669447381,5.29311753995907,6.2117308054709,0,0.563047426353546,0.73260649706906,0,0,5.0827665835536,7.36520378411483,4.58316410751517,4.98374228796694,7.53590771747707,2.2661816921691,4.05013500139084,2.70192721934532,2.71885445390523,5.1776031175182,0.518936737920883,0.798049746802062,1.19513524027894,0.486213434136588,0.419226325255965,0.367687016900028,1.55572709461131,0.618105171716683,0.962757628775446,0.252697211763798,0.25347929989024,0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| 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| ||
|short_description=p3@Praf2 | |short_description=p3@Praf2 | ||
}} | }} |
Latest revision as of 00:31, 2 October 2015
Short description: | p3@Praf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Praf2_5end |
Coexpression cluster: | NA |
Association with transcript: | 60bp_to_, -60bp_to_ENSMUST00000033489, NM_138602, uc009sme.1_5end |
EntrezGene: | Praf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.43e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.43e-18 | 23 |
neural cell | 3.18e-18 | 43 |
ectodermal cell | 1.59e-17 | 44 |
neurectodermal cell | 1.59e-17 | 44 |
embryonic cell | 2.68e-13 | 70 |
neuron | 2.69e-12 | 33 |
neuronal stem cell | 2.69e-12 | 33 |
neuroblast | 2.69e-12 | 33 |
electrically signaling cell | 2.69e-12 | 33 |
electrically responsive cell | 4.40e-12 | 39 |
electrically active cell | 4.40e-12 | 39 |
migratory neural crest cell | 3.72e-07 | 10 |
neuron associated cell | 3.72e-07 | 10 |
glial cell (sensu Vertebrata) | 3.72e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 3.72e-07 | 10 |
glial cell | 3.72e-07 | 10 |
glioblast | 3.72e-07 | 10 |
glioblast (sensu Vertebrata) | 3.72e-07 | 10 |