FF:10169-103B7: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005564 | ||
|accession_numbers=CAGE;DRX008667;DRR009539;DRZ000964;DRZ002349;DRZ012314;DRZ013699 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001954,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0003022,UBERON:0010317,UBERON:0001017,UBERON:0002421,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0000349,UBERON:0002600 | |||
|ancestors_in_cell_lineage_facet= | |ancestors_in_cell_lineage_facet= | ||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010153 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score=chr21:34442439..34442455,+!p1@OLIG1!2.47!295.03!OLIG1;;chr7:100065686..100065701,-!p2@TSC22D4!2.42!264.02!TSC22D4;;chr15:80733570..80733659,+!p2@ARNT2!2.24!170.97!ARNT2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.15!139.96!PEG3;;chr4:81118647..81118666,+!p1@PRDM8!2.08!155.87!PRDM8;;chr17:37764128..37764258,-!p1@NEUROD2!2.05!110.54!NEUROD2;;chr7:31380292..31380351,-!p1@NEUROD6!2.01!100.20!NEUROD6;;chr9:114287433..114287513,+!p1@ZNF483!1.96!223.46!ZNF483;;chr10:48355030..48355090,+!p1@ZNF488!1.96!113.72!ZNF488;;chr4:57547454..57547469,-!p1@HOPX!1.89!77.14!HOPX;;chr3:181429704..181429722,+!p1@SOX2!1.88!74.75!SOX2;;chr21:34442540..34442560,+!p2@OLIG1!1.82!64.41!OLIG1;;chr12:106976774..106976788,+!p1@RFX4!1.81!63.62!RFX4;;chr2:2334997..2335053,-!p1@MYT1L!1.78!59.64!MYT1L;;chr14:29235961..29236008,+!p1@FOXG1!1.74!54.08!FOXG1;;chr22:38380543..38380569,-!p1@SOX10!1.73!53.28!SOX10;;chr10:119302232..119302265,+!p1@EMX2!1.69!48.51!EMX2;;chr12:106976678..106976708,+!p2@RFX4!1.69!47.71!RFX4;;chrX:25034067..25034088,-!p1@ARX!1.68!46.92!ARX;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.66!44.53!SMARCE1;;chr17:53342311..53342400,+!p1@HLF!1.64!48.51!HLF;;chr2:60781201..60781258,-!p3@BCL11A!1.63!42.15!BCL11A;;chr11:61520075..61520136,+!p1@C11orf9!1.62!84.29!C11orf9;;chr14:29234581..29234601,+!p2@FOXG1!1.62!40.56!FOXG1;;chr21:34398234..34398250,+!p1@OLIG2!1.59!38.17!OLIG2;;chrX:85969626..85969664,+!p1@DACH2!1.58!37.38!DACH2;;chr9:77112244..77112262,+!p1@RORB!1.56!38.97!RORB;;chr1:214161272..214161322,+!p1@PROX1!1.55!48.51!PROX1;;chr14:33403881..33403924,+!p1@NPAS3!1.54!33.40!NPAS3;;chr15:80735246..80735321,+!p3@ARNT2!1.54!33.40!ARNT2;;chr2:145277882..145277967,-!p3@ZEB2!1.52!54.87!ZEB2;;chr2:166326200..166326216,+!p1@CSRNP3!1.52!46.12!CSRNP3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.51!31.01!POU3F3;;chr12:26277817..26277863,-!p2@BHLHE41!1.49!40.56!BHLHE41;;chr11:113930425..113930471,+!p1@ZBTB16!1.48!41.35!ZBTB16;;chr11:8102846..8102892,+!p1@TUB!1.47!38.97!TUB;;chr11:31832658..31832681,-!p1@PAX6!1.47!28.63!PAX6;;chr1:244219775..244219893,+!p2@ZNF238!1.46!37.38!ZNF238;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.04!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.45!27.04!SOX2;;chr9:126774018..126774055,+!p1@LHX2!1.45!27.04!LHX2;;chr8:106330656..106330684,+!p1@ZFPM2!1.44!68.39!ZFPM2;;chr8:53322304..53322340,-!p1@ST18!1.44!26.24!ST18;;chr8:65492915..65492932,+!p1@BHLHE22!1.42!25.45!BHLHE22;;chr7:63505799..63505904,+!p1@ZNF727!1.41!24.65!ZNF727;;chr15:80696703..80696754,+!p1@ARNT2!1.38!30.22!ARNT2;;chr19:13135582..13135600,+!p3@NFIX!1.38!23.06!NFIX;;chr14:33403648..33403710,+!p3@NPAS3!1.37!22.27!NPAS3;;chr2:162272785..162272836,+!p1@TBR1!1.37!22.27!TBR1;;chr2:95963052..95963106,+!p1@KCNIP3!1.32!19.88!KCNIP3;;chr19:46800289..46800327,+!p2@HIF3A!1.32!19.88!HIF3A;;chr8:106330696..106330719,+!p2@ZFPM2!1.31!24.65!ZFPM2;;chr3:114173720..114173794,-!p6@ZBTB20!1.29!18.29!ZBTB20;;chr11:31832862..31832884,-!p2@PAX6!1.29!18.29!PAX6;;chr12:26277956..26277980,-!p1@BHLHE41!1.28!64.41!BHLHE41;;chr3:147127142..147127168,+!p1@ZIC1!1.27!17.50!ZIC1;;chr19:57352109..57352153,-!p2@ZIM2!1.27!17.50!ZIM2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.25!16.70!POU3F3;;chr10:64134120..64134183,+!p1@ZNF365!1.24!19.88!ZNF365;;chr14:29237009..29237049,+!p4@FOXG1!1.23!15.90!FOXG1;;chr4:57522166..57522260,-!p2@HOPX!1.21!17.50!HOPX;;chr17:38219209..38219230,+!p1@THRA!1.19!185.29!THRA;;chr22:41763452..41763466,+!p2@TEF!1.19!14.31!TEF;;chr7:50344289..50344323,+!p1@IKZF1!1.19!14.31!IKZF1;;chr9:126773880..126773895,+!p2@LHX2!1.19!14.31!LHX2;;chr12:103351444..103351461,+!p1@ASCL1!1.19!14.31!ASCL1;;chr6:19837592..19837621,+!p1@ID4!1.16!81.11!ID4;;chr11:47400078..47400106,-!p1@SPI1!1.16!13.52!SPI1;;chr12:54779511..54779577,-!p5@ZNF385A!1.16!13.52!ZNF385A;;chr4:57522598..57522664,-!p3@HOPX!1.16!13.52!HOPX;;chr19:38085768..38085821,+!p1@ZNF540!1.15!19.88!ZNF540;;chr17:70117153..70117174,+!p1@SOX9!1.14!129.62!SOX9;;chr19:30863271..30863338,+!p1@ZNF536!1.14!12.72!ZNF536;;chr8:65492973..65492989,+!p5@BHLHE22!1.14!12.72!BHLHE22;;chr9:2159850..2159880,+!p14@SMARCA2!1.14!12.72!SMARCA2;;chr3:141105705..141105770,+!p4@ZBTB38!1.13!15.11!ZBTB38;;chr4:57522674..57522699,-!p5@HOPX!1.11!11.93!HOPX;;chr14:58798013..58798071,+!p2@ARID4A!1.11!11.93!ARID4A;;chr16:85932760..85932775,+!p1@IRF8!1.11!11.93!IRF8;;chr8:22550530..22550609,-!p2@EGR3!1.11!11.93!EGR3;;chr8:53322347..53322378,-!p2@ST18!1.11!11.93!ST18;;chr1:244214577..244214593,+!p1@ZNF238!1.11!11.93!ZNF238;;chr20:3388541..3388575,-!p2@C20orf194!1.10!45.33!C20orf194;;chr3:114819124..114819200,-!p3@ZBTB20!1.10!27.04!ZBTB20;;chr1:151032860..151032918,+!p1@MLLT11!1.08!132.80!MLLT11;;chr21:34442584..34442587,+!p3@OLIG1!1.08!11.13!OLIG1;;chr2:42721205..42721307,+!p4@MTA3!1.08!11.13!MTA3;;chr3:147127177..147127194,+!p2@ZIC1!1.08!11.13!ZIC1;;chr9:126774058..126774081,+!p3@LHX2!1.08!11.13!LHX2;;chr10:134599649..134599653,-!p1@NKX6-2!1.08!11.13!NKX6-2;;chr12:24102576..2410262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V1!0.41!1.59!ETV1;;chr7:20826426..20826432,-!p2@SP8!0.41!1.59!SP8;;chr7:28220506..28220552,-!p3@JAZF1!0.41!1.59!JAZF1;;chr7:73038889..73038905,-!p3@MLXIPL!0.41!1.59!MLXIPL;;chr7:96634850..96634874,+!p3@DLX6!0.41!1.59!DLX6;;chr8:116673894..116673913,-!p12@TRPS1!0.41!1.59!TRPS1;;chr8:22550509..22550526,-!p6@EGR3!0.41!1.59!EGR3;;chr8:22550825..22550844,-!p7@EGR3!0.41!1.59!EGR3;;chr8:28748765..28748785,+!p10@HMBOX1!0.41!1.59!HMBOX1;;chr8:53162037..53162058,-!p5@ST18!0.41!1.59!ST18;;chr8:53166916..53166925,-!p10@ST18!0.41!1.59!ST18;;chr8:53322411..53322422,-!p6@ST18!0.41!1.59!ST18;;chr8:86089498..86089519,+!p6@E2F5!0.41!1.59!E2F5;;chr8:93107451..93107468,-!p2@RUNX1T1!0.41!1.59!RUNX1T1;;chr9:115819058..115819082,-!p2@ZFP37!0.41!1.59!ZFP37;;chr9:14313641..14313652,-!p13@NFIB!0.41!1.59!NFIB;;chr9:14314642..14314645,-!p16@NFIB!0.41!1.59!NFIB;;chr9:94173193..94173206,-!p5@NFIL3!0.41!1.59!NFIL3;;chrX:84498946..84498955,+!p4@ZNF711!0.41!1.59!ZNF711;;chrX:147582130..147582147,+!p3@AFF2!0.41!1.59!AFF2;;chr9:73028433..73028444,-!p15@KLF9!0.41!1.59!KLF9;;chr14:99738059..99738086,-!p2@BCL11B!0.41!1.59!BCL11B;;chr14:99738138..99738163,-!p1@BCL11B!0.41!1.59!BCL11B;;chr15:61521462..61521482,-!p4@RORA!0.41!1.59!RORA;;chr15:61521495..61521506,-!p5@RORA!0.41!1.59!RORA;;chr15:66994523..66994541,+!p5@SMAD6!0.41!1.59!SMAD6;;chr15:77197723..77197734,-!p4@SCAPER!0.41!1.59!SCAPER;;chr15:80696305..80696320,+!p10@ARNT2!0.41!1.59!ARNT2;;chr15:90544182..90544195,+!p7@ZNF710!0.41!1.59!ZNF710;;chr15:96877047..96877056,+!p39@NR2F2!0.41!1.59!NR2F2;;chr16:51185573..51185593,-!p3@SALL1!0.41!1.59!SALL1;;chr16:54964899..54964914,+!p2@IRX5!0.41!1.59!IRX5;;chr16:79634447..79634462,-!p8@MAF!0.41!1.59!MAF;;chr16:79634464..79634493,-!p5@MAF!0.41!1.59!MAF;;chr16:88752836..88752852,-!p3@SNAI3!0.41!1.59!SNAI3;;chr17:38244601..38244612,+!p6@THRA!0.41!1.59!THRA;;chr17:4883914..4883924,-!p7@CAMTA2!0.41!1.59!CAMTA2;;chr17:53342451..53342471,+!p4@HLF!0.41!1.59!HLF;;chr17:7197911..7197964,-!p1@YBX2!0.41!1.59!YBX2;;chr17:7387459..7387470,-!p10@ZBTB4!0.41!1.59!ZBTB4;;chr18:45935720..45935772,-!p1@ZBTB7C!0.41!1.59!ZBTB7C;;chr18:52969674..52969685,-!p24@TCF4!0.41!1.59!TCF4;;chr18:52988952..52988965,-!p23@TCF4!0.41!1.59!TCF4;;chr18:53068982..53068993,-!p20@TCF4!0.41!1.59!TCF4;;chr18:53069219..53069253,-!p35@TCF4!0.41!1.59!TCF4;;chr18:53069419..53069450,-!p34@TCF4!0.41!1.59!TCF4;;chr18:53253077..53253100,-!p46@TCF4!0.41!1.59!TCF4;;chr18:56532079..56532095,+!p8@ZNF532!0.41!1.59!ZNF532;;chr19:12444399..12444415,-!p5@ZNF563!0.41!1.59!ZNF563;;chr19:13135369..13135375,+!p21@NFIX!0.41!1.59!NFIX;;chr19:13135790..13135804,+!p26@NFIX!0.41!1.59!NFIX;;chr19:13135914..13135942,+!p19@NFIX!0.41!1.59!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.41!1.59!NFIX;;chr19:16435423..16435484,+!p5@KLF2!0.41!1.59!KLF2;;chr19:1863887..1863918,-!p6@KLF16!0.41!1.59!KLF16;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.41!1.59!ZNF676;;chr19:22966925..22966958,-!p1@ZNF99!0.41!1.59!ZNF99;;chr19:30863189..30863200,+!p3@ZNF536!0.41!1.59!ZNF536;;chr19:3359158..3359209,+!p5@NFIC!0.41!1.59!NFIC;;chr19:46801484..46801498,+!p9@HIF3A!0.41!1.59!HIF3A;;chr19:47910182..47910187,-!p3@MEIS3!0.41!1.59!MEIS3;;chr19:54041574..54041589,+!p6@ZNF331!0.41!1.59!ZNF331;;chr19:54041669..54041697,+!p2@ZNF331!0.41!1.59!ZNF331;;chr19:57324701..57324716,-!p2@PEG3!0.41!1.59!PEG3;;chr1:114301553..114301576,-!p6@PHTF1!0.41!1.59!PHTF1;;chr1:151032957..151032968,+!p7@MLLT11!0.41!1.59!MLLT11;;chr1:164528866..164528877,+!p12@PBX1!0.41!1.59!PBX1;;chr1:170632683..170632696,+!p12@PRRX1!0.41!1.59!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.41!1.59!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.41!1.59!PRRX1;;chr1:212873084..212873137,-!p2@BATF3!0.41!1.59!BATF3;;chr1:212873162..212873188,-!p3@BATF3!0.41!1.59!BATF3;; | |expression_enrichment_score=chr21:34442439..34442455,+!p1@OLIG1!2.47!295.03!OLIG1;;chr7:100065686..100065701,-!p2@TSC22D4!2.42!264.02!TSC22D4;;chr15:80733570..80733659,+!p2@ARNT2!2.24!170.97!ARNT2;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.15!139.96!PEG3;;chr4:81118647..81118666,+!p1@PRDM8!2.08!155.87!PRDM8;;chr17:37764128..37764258,-!p1@NEUROD2!2.05!110.54!NEUROD2;;chr7:31380292..31380351,-!p1@NEUROD6!2.01!100.20!NEUROD6;;chr9:114287433..114287513,+!p1@ZNF483!1.96!223.46!ZNF483;;chr10:48355030..48355090,+!p1@ZNF488!1.96!113.72!ZNF488;;chr4:57547454..57547469,-!p1@HOPX!1.89!77.14!HOPX;;chr3:181429704..181429722,+!p1@SOX2!1.88!74.75!SOX2;;chr21:34442540..34442560,+!p2@OLIG1!1.82!64.41!OLIG1;;chr12:106976774..106976788,+!p1@RFX4!1.81!63.62!RFX4;;chr2:2334997..2335053,-!p1@MYT1L!1.78!59.64!MYT1L;;chr14:29235961..29236008,+!p1@FOXG1!1.74!54.08!FOXG1;;chr22:38380543..38380569,-!p1@SOX10!1.73!53.28!SOX10;;chr10:119302232..119302265,+!p1@EMX2!1.69!48.51!EMX2;;chr12:106976678..106976708,+!p2@RFX4!1.69!47.71!RFX4;;chrX:25034067..25034088,-!p1@ARX!1.68!46.92!ARX;;chr17:38821373..38821440,-!p1@KRT222,p2@SMARCE1!1.66!44.53!SMARCE1;;chr17:53342311..53342400,+!p1@HLF!1.64!48.51!HLF;;chr2:60781201..60781258,-!p3@BCL11A!1.63!42.15!BCL11A;;chr11:61520075..61520136,+!p1@C11orf9!1.62!84.29!C11orf9;;chr14:29234581..29234601,+!p2@FOXG1!1.62!40.56!FOXG1;;chr21:34398234..34398250,+!p1@OLIG2!1.59!38.17!OLIG2;;chrX:85969626..85969664,+!p1@DACH2!1.58!37.38!DACH2;;chr9:77112244..77112262,+!p1@RORB!1.56!38.97!RORB;;chr1:214161272..214161322,+!p1@PROX1!1.55!48.51!PROX1;;chr14:33403881..33403924,+!p1@NPAS3!1.54!33.40!NPAS3;;chr15:80735246..80735321,+!p3@ARNT2!1.54!33.40!ARNT2;;chr2:145277882..145277967,-!p3@ZEB2!1.52!54.87!ZEB2;;chr2:166326200..166326216,+!p1@CSRNP3!1.52!46.12!CSRNP3;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!1.51!31.01!POU3F3;;chr12:26277817..26277863,-!p2@BHLHE41!1.49!40.56!BHLHE41;;chr11:113930425..113930471,+!p1@ZBTB16!1.48!41.35!ZBTB16;;chr11:8102846..8102892,+!p1@TUB!1.47!38.97!TUB;;chr11:31832658..31832681,-!p1@PAX6!1.47!28.63!PAX6;;chr1:244219775..244219893,+!p2@ZNF238!1.46!37.38!ZNF238;;chr19:46801639..46801699,+!p1@HIF3A!1.45!27.04!HIF3A;;chr3:181429741..181429767,+!p2@SOX2!1.45!27.04!SOX2;;chr9:126774018..126774055,+!p1@LHX2!1.45!27.04!LHX2;;chr8:106330656..106330684,+!p1@ZFPM2!1.44!68.39!ZFPM2;;chr8:53322304..53322340,-!p1@ST18!1.44!26.24!ST18;;chr8:65492915..65492932,+!p1@BHLHE22!1.42!25.45!BHLHE22;;chr7:63505799..63505904,+!p1@ZNF727!1.41!24.65!ZNF727;;chr15:80696703..80696754,+!p1@ARNT2!1.38!30.22!ARNT2;;chr19:13135582..13135600,+!p3@NFIX!1.38!23.06!NFIX;;chr14:33403648..33403710,+!p3@NPAS3!1.37!22.27!NPAS3;;chr2:162272785..162272836,+!p1@TBR1!1.37!22.27!TBR1;;chr2:95963052..95963106,+!p1@KCNIP3!1.32!19.88!KCNIP3;;chr19:46800289..46800327,+!p2@HIF3A!1.32!19.88!HIF3A;;chr8:106330696..106330719,+!p2@ZFPM2!1.31!24.65!ZFPM2;;chr3:114173720..114173794,-!p6@ZBTB20!1.29!18.29!ZBTB20;;chr11:31832862..31832884,-!p2@PAX6!1.29!18.29!PAX6;;chr12:26277956..26277980,-!p1@BHLHE41!1.28!64.41!BHLHE41;;chr3:147127142..147127168,+!p1@ZIC1!1.27!17.50!ZIC1;;chr19:57352109..57352153,-!p2@ZIM2!1.27!17.50!ZIM2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.25!16.70!POU3F3;;chr10:64134120..64134183,+!p1@ZNF365!1.24!19.88!ZNF365;;chr14:29237009..29237049,+!p4@FOXG1!1.23!15.90!FOXG1;;chr4:57522166..57522260,-!p2@HOPX!1.21!17.50!HOPX;;chr17:38219209..38219230,+!p1@THRA!1.19!185.29!THRA;;chr22:41763452..41763466,+!p2@TEF!1.19!14.31!TEF;;chr7:50344289..50344323,+!p1@IKZF1!1.19!14.31!IKZF1;;chr9:126773880..126773895,+!p2@LHX2!1.19!14.31!LHX2;;chr12:103351444..103351461,+!p1@ASCL1!1.19!14.31!ASCL1;;chr6:19837592..19837621,+!p1@ID4!1.16!81.11!ID4;;chr11:47400078..47400106,-!p1@SPI1!1.16!13.52!SPI1;;chr12:54779511..54779577,-!p5@ZNF385A!1.16!13.52!ZNF385A;;chr4:57522598..57522664,-!p3@HOPX!1.16!13.52!HOPX;;chr19:38085768..38085821,+!p1@ZNF540!1.15!19.88!ZNF540;;chr17:70117153..70117174,+!p1@SOX9!1.14!129.62!SOX9;;chr19:30863271..30863338,+!p1@ZNF536!1.14!12.72!ZNF536;;chr8:65492973..65492989,+!p5@BHLHE22!1.14!12.72!BHLHE22;;chr9:2159850..2159880,+!p14@SMARCA2!1.14!12.72!SMARCA2;;chr3:141105705..141105770,+!p4@ZBTB38!1.13!15.11!ZBTB38;;chr4:57522674..57522699,-!p5@HOPX!1.11!11.93!HOPX;;chr14:58798013..58798071,+!p2@ARID4A!1.11!11.93!ARID4A;;chr16:85932760..85932775,+!p1@IRF8!1.11!11.93!IRF8;;chr8:22550530..22550609,-!p2@EGR3!1.11!11.93!EGR3;;chr8:53322347..53322378,-!p2@ST18!1.11!11.93!ST18;;chr1:244214577..244214593,+!p1@ZNF238!1.11!11.93!ZNF238;;chr20:3388541..3388575,-!p2@C20orf194!1.10!45.33!C20orf194;;chr3:114819124..114819200,-!p3@ZBTB20!1.10!27.04!ZBTB20;;chr1:151032860..151032918,+!p1@MLLT11!1.08!132.80!MLLT11;;chr21:34442584..34442587,+!p3@OLIG1!1.08!11.13!OLIG1;;chr2:42721205..42721307,+!p4@MTA3!1.08!11.13!MTA3;;chr3:147127177..147127194,+!p2@ZIC1!1.08!11.13!ZIC1;;chr9:126774058..126774081,+!p3@LHX2!1.08!11.13!LHX2;;chr10:134599649..134599653,-!p1@NKX6-2!1.08!11.13!NKX6-2;;chr12:24102576..24102623,-!p2@SOX5!1.08!11.13!SOX5;;chr8:40755333..40755352,-!p1@ZMAT4!1.08!11.13!ZMAT4;;chr16:67198633..67198671,+!p1@HSF4!1.08!11.13!HSF4;;chr14:73360799..73360817,-!p1@DPF3!1.07!37.38!DPF3;;chr17:7492684..7492778,-!p2@SOX15!1.07!23.06!SOX15;;chr20:62680984..62680999,-!p1@SOX18!1.07!14.31!SOX18;;chr17:38219143..38219154,+!p2@THRA!1.06!37.38!THRA;;chr1:170632285..170632309,+!p1@PRRX1!1.06!11.93!PRRX1;;chr19:38720294..38720348,-!p1@DPF1!1.05!12.72!DPF1;;chr3:126076242..126076257,-!p1@KLF15!1.05!12.72!KLF15;;chr2:2335070..2335098,-!p4@MYT1L!1.05!10.34!MYT1L;;chr2:2335109..2335134,-!p2@MYT1L!1.05!10.34!MYT1L;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.05!10.34!ZBED1;;chr9:2159800..2159825,+!p15@SMARCA2!1.05!10.34!SMARCA2;;chr11:125034640..125034655,+!p1@PKNOX2!1.05!10.34!PKNOX2;;chr9:124976328..124976372,-!p2@LHX6!1.05!10.34!LHX6;;chr1:61548069..61548102,+!p3@NFIA!1.04!24.65!NFIA;;chrX:118739835..118739862,-!p1@NKRF!1.04!11.13!NKRF;;chr5:92920256..92920282,+!p7@NR2F1!1.03!11.93!NR2F1;;chr5:124082322..124082364,-!p1@ZNF608!1.02!24.65!ZNF608;;chr12:26277929..26277955,-!p3@BHLHE41!1.02!13.52!BHLHE41;;chr14:33408072..33408114,+!p2@NPAS3!1.02!11.13!NPAS3;;chr11:85393886..85393913,-!p3@CREBZF!1.02!9.54!CREBZF;;chrX:147582254..147582320,+!p1@AFF2!1.02!9.54!AFF2;;chr2:182545234..182545252,-!p1@NEUROD1!1.02!9.54!NEUROD1;;chr3:141105235..141105307,+!p7@ZBTB38!1.02!9.54!ZBTB38;;chr16:51185318..51185348,-!p2@SALL1!1.02!9.54!SALL1;;chr19:13135386..13135435,+!p4@NFIX!1.02!9.54!NFIX;;chr7:115670804..115670825,-!p1@TFEC!1.02!9.54!TFEC;;chr6:126112039..126112062,+!p8@NCOA7!1.01!11.13!NCOA7;;chr9:14314131..14314147,-!p2@NFIB!1.00!50.89!NFIB;;chr19:21512202..21512225,-!p1@ZNF708!1.00!46.92!ZNF708;;chr2:60780607..60780624,-!p2@BCL11A!0.99!27.83!BCL11A;;chr19:53636125..53636178,-!p1@ZNF415!0.99!25.45!ZNF415;;chr19:58545454..58545498,+!p1@ZSCAN1!0.99!8.75!ZSCAN1;;chr15:31658288..31658338,+!p4@KLF13!0.99!8.75!KLF13;;chr15:80696836..80696853,+!p7@ARNT2!0.99!8.75!ARNT2;;chr11:31832807..31832823,-!p4@PAX6!0.99!8.75!PAX6;;chr14:29236269..29236285,+!p3@FOXG1!0.99!8.75!FOXG1;;chr2:2328299..2328363,-!p3@MYT1L!0.99!8.75!MYT1L;;chr3:187463179..187463201,-!p2@BCL6!0.98!36.58!BCL6;;chr19:13134772..13134822,+!p2@NFIX!0.98!12.72!NFIX;;chr11:8102819..8102845,+!p3@TUB!0.97!10.34!TUB;;chr8:80680024..80680046,-!p2@HEY1!0.97!9.54!HEY1;;chr18:53068911..53068935,-!p4@TCF4!0.97!9.54!TCF4;;chr6:126112074..126112144,+!p1@NCOA7!0.96!112.13!NCOA7;;chr17:4890919..4890985,-!p1@CAMTA2!0.96!77.93!CAMTA2;;chr5:88178983..88179012,-!p1@MEF2C!0.96!64.41!MEF2C;;chr1:151032782..151032801,+!p4@MLLT11!0.96!16.70!MLLT11;;chr18:53254566..53254567,-!p8@TCF4!0.96!13.52!TCF4;;chr12:24715376..24715432,-!p1@SOX5!0.96!10.34!SOX5;;chr8:116681247..116681261,-!p8@TRPS1!0.95!10.34!TRPS1;;chr10:119302268..119302282,+!p4@EMX2!0.95!7.95!EMX2;;chr12:106976656..106976672,+!p4@RFX4!0.95!7.95!RFX4;;chr2:113057501..113057529,+!p4@ZC3H6!0.95!7.95!ZC3H6;;chr2:24714729..24714761,+!p1@NCOA1!0.95!7.95!NCOA1;;chr2:73520667..73520683,-!p1@EGR4!0.95!7.95!EGR4;;chr1:165414325..165414369,-!p1@RXRG!0.95!7.95!RXRG;;chr20:42544782..42544828,+!p4@TOX2!0.95!7.95!TOX2;;chrX:118739782..118739829,-!p2@NKRF!0.95!7.95!NKRF;;chrX:84498989..84499003,+!p1@ZNF711!0.93!10.34!ZNF711;;chr9:3525867..3525902,-!p3@RFX3!0.92!26.24!RFX3;;chr5:178368186..178368238,+!p1@ZNF454!0.92!13.52!ZNF454;;chr2:145282041..145282092,-!p8@ZEB2!0.92!11.13!ZEB2;;chr7:86781858..86781879,+!p3@DMTF1!0.91!11.93!DMTF1;;chr3:33482052..33482116,-!p2@UBP1!0.91!11.13!UBP1;;chr13:46549911..46549956,-!p3@ZC3H13!0.91!10.34!ZC3H13;;chr10:64133862..64133884,+!p4@ZNF365!0.91!7.16!ZNF365;;chr11:113930401..113930422,+!p3@ZBTB16!0.91!7.16!ZBTB16;;chr2:95963120..95963136,+!p2@KCNIP3!0.91!7.16!KCNIP3;;chr4:26344754..26344772,+!p10@RBPJ!0.91!7.16!RBPJ;;chr4:57547751..57547764,-!p6@HOPX!0.91!7.16!HOPX;;chr16:1031762..1031781,+!p1@SOX8!0.91!7.16!SOX8;;chr9:124991204..124991246,-!p1@LHX6!0.91!7.16!LHX6;;chr8:145560111..145560165,-!p2@SCRT1!0.91!7.16!SCRT1;;chr8:30890810..30890880,-!p1@PURG!0.91!7.16!PURG;;chr19:7580549..7580596,+!p3@ZNF358!0.91!7.16!ZNF358;;chr1:40105299..40105326,-!p1@HEYL!0.91!7.16!HEYL;;chr1:61548225..61548299,+!p1@NFIA!0.90!96.22!NFIA;;chr4:206390..206444,+!p1@ZNF876P!0.90!12.72!ZNF876P;;chr8:80679993..80680011,-!p1@HEY1!0.90!10.34!HEY1;;chr1:41827095..41827155,+!p1@FOXO6!0.90!9.54!FOXO6;;chr7:14029283..14029311,-!p1@ETV1!0.89!38.17!ETV1;;chr6:126070769..126070801,+!p1@HEY2!0.89!7.95!HEY2;;chr1:8585945..8586056,-!p3@RERE!0.88!23.06!RERE;;chr1:61547894..61547968,+!p2@NFIA!0.88!19.88!NFIA;;chr19:56988677..56988729,-!p1@ZNF667!0.88!11.93!ZNF667;;chr12:54785074..54785122,-!p2@ZNF385A!0.88!10.34!ZNF385A;;chr2:113057415..113057477,+!p3@ZC3H6!0.88!8.75!ZC3H6;;chr2:145277640..145277771,-!p1@ZEB2!0.87!91.45!ZEB2;;chr5:92918919..92918942,+!p1@NR2F1!0.87!30.22!NR2F1;;chr1:151032833..151032850,+!p3@MLLT11!0.87!15.11!MLLT11;;chr19:9879350..9879419,-!p2@ZNF846!0.87!14.31!ZNF846;;chr7:64023410..64023428,-!p2@ZNF680!0.87!10.34!ZNF680;;chr1:116383738..116383752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V1!0.41!1.59!ETV1;;chr7:20826426..20826432,-!p2@SP8!0.41!1.59!SP8;;chr7:28220506..28220552,-!p3@JAZF1!0.41!1.59!JAZF1;;chr7:73038889..73038905,-!p3@MLXIPL!0.41!1.59!MLXIPL;;chr7:96634850..96634874,+!p3@DLX6!0.41!1.59!DLX6;;chr8:116673894..116673913,-!p12@TRPS1!0.41!1.59!TRPS1;;chr8:22550509..22550526,-!p6@EGR3!0.41!1.59!EGR3;;chr8:22550825..22550844,-!p7@EGR3!0.41!1.59!EGR3;;chr8:28748765..28748785,+!p10@HMBOX1!0.41!1.59!HMBOX1;;chr8:53162037..53162058,-!p5@ST18!0.41!1.59!ST18;;chr8:53166916..53166925,-!p10@ST18!0.41!1.59!ST18;;chr8:53322411..53322422,-!p6@ST18!0.41!1.59!ST18;;chr8:86089498..86089519,+!p6@E2F5!0.41!1.59!E2F5;;chr8:93107451..93107468,-!p2@RUNX1T1!0.41!1.59!RUNX1T1;;chr9:115819058..115819082,-!p2@ZFP37!0.41!1.59!ZFP37;;chr9:14313641..14313652,-!p13@NFIB!0.41!1.59!NFIB;;chr9:14314642..14314645,-!p16@NFIB!0.41!1.59!NFIB;;chr9:94173193..94173206,-!p5@NFIL3!0.41!1.59!NFIL3;;chrX:84498946..84498955,+!p4@ZNF711!0.41!1.59!ZNF711;;chrX:147582130..147582147,+!p3@AFF2!0.41!1.59!AFF2;;chr9:73028433..73028444,-!p15@KLF9!0.41!1.59!KLF9;;chr14:99738059..99738086,-!p2@BCL11B!0.41!1.59!BCL11B;;chr14:99738138..99738163,-!p1@BCL11B!0.41!1.59!BCL11B;;chr15:61521462..61521482,-!p4@RORA!0.41!1.59!RORA;;chr15:61521495..61521506,-!p5@RORA!0.41!1.59!RORA;;chr15:66994523..66994541,+!p5@SMAD6!0.41!1.59!SMAD6;;chr15:77197723..77197734,-!p4@SCAPER!0.41!1.59!SCAPER;;chr15:80696305..80696320,+!p10@ARNT2!0.41!1.59!ARNT2;;chr15:90544182..90544195,+!p7@ZNF710!0.41!1.59!ZNF710;;chr15:96877047..96877056,+!p39@NR2F2!0.41!1.59!NR2F2;;chr16:51185573..51185593,-!p3@SALL1!0.41!1.59!SALL1;;chr16:54964899..54964914,+!p2@IRX5!0.41!1.59!IRX5;;chr16:79634447..79634462,-!p8@MAF!0.41!1.59!MAF;;chr16:79634464..79634493,-!p5@MAF!0.41!1.59!MAF;;chr16:88752836..88752852,-!p3@SNAI3!0.41!1.59!SNAI3;;chr17:38244601..38244612,+!p6@THRA!0.41!1.59!THRA;;chr17:4883914..4883924,-!p7@CAMTA2!0.41!1.59!CAMTA2;;chr17:53342451..53342471,+!p4@HLF!0.41!1.59!HLF;;chr17:7197911..7197964,-!p1@YBX2!0.41!1.59!YBX2;;chr17:7387459..7387470,-!p10@ZBTB4!0.41!1.59!ZBTB4;;chr18:45935720..45935772,-!p1@ZBTB7C!0.41!1.59!ZBTB7C;;chr18:52969674..52969685,-!p24@TCF4!0.41!1.59!TCF4;;chr18:52988952..52988965,-!p23@TCF4!0.41!1.59!TCF4;;chr18:53068982..53068993,-!p20@TCF4!0.41!1.59!TCF4;;chr18:53069219..53069253,-!p35@TCF4!0.41!1.59!TCF4;;chr18:53069419..53069450,-!p34@TCF4!0.41!1.59!TCF4;;chr18:53253077..53253100,-!p46@TCF4!0.41!1.59!TCF4;;chr18:56532079..56532095,+!p8@ZNF532!0.41!1.59!ZNF532;;chr19:12444399..12444415,-!p5@ZNF563!0.41!1.59!ZNF563;;chr19:13135369..13135375,+!p21@NFIX!0.41!1.59!NFIX;;chr19:13135790..13135804,+!p26@NFIX!0.41!1.59!NFIX;;chr19:13135914..13135942,+!p19@NFIX!0.41!1.59!NFIX;;chr19:13136057..13136085,+!p11@NFIX!0.41!1.59!NFIX;;chr19:16435423..16435484,+!p5@KLF2!0.41!1.59!KLF2;;chr19:1863887..1863918,-!p6@KLF16!0.41!1.59!KLF16;;chr19:22398550..22398579,-!p@chr19:22398550..22398579,-!0.41!1.59!ZNF676;;chr19:22966925..22966958,-!p1@ZNF99!0.41!1.59!ZNF99;;chr19:30863189..30863200,+!p3@ZNF536!0.41!1.59!ZNF536;;chr19:3359158..3359209,+!p5@NFIC!0.41!1.59!NFIC;;chr19:46801484..46801498,+!p9@HIF3A!0.41!1.59!HIF3A;;chr19:47910182..47910187,-!p3@MEIS3!0.41!1.59!MEIS3;;chr19:54041574..54041589,+!p6@ZNF331!0.41!1.59!ZNF331;;chr19:54041669..54041697,+!p2@ZNF331!0.41!1.59!ZNF331;;chr19:57324701..57324716,-!p2@PEG3!0.41!1.59!PEG3;;chr1:114301553..114301576,-!p6@PHTF1!0.41!1.59!PHTF1;;chr1:151032957..151032968,+!p7@MLLT11!0.41!1.59!MLLT11;;chr1:164528866..164528877,+!p12@PBX1!0.41!1.59!PBX1;;chr1:170632683..170632696,+!p12@PRRX1!0.41!1.59!PRRX1;;chr1:170632723..170632739,+!p8@PRRX1!0.41!1.59!PRRX1;;chr1:170632762..170632786,+!p13@PRRX1!0.41!1.59!PRRX1;;chr1:212873084..212873137,-!p2@BATF3!0.41!1.59!BATF3;;chr1:212873162..212873188,-!p3@BATF3!0.41!1.59!BATF3;; | ||
|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002421;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 41: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/hippocampus%2520-%2520adult%252c%2520donor10196.CNhs13795.10169-103B7.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/hippocampus%2520-%2520adult%252c%2520donor10196.CNhs13795.10169-103B7.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/hippocampus%2520-%2520adult%252c%2520donor10196.CNhs13795.10169-103B7.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/hippocampus%2520-%2520adult%252c%2520donor10196.CNhs13795.10169-103B7.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/hippocampus%2520-%2520adult%252c%2520donor10196.CNhs13795.10169-103B7.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:10169-103B7 | |id=FF:10169-103B7 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000210;;FF:0010153 | ||
|is_obsolete= | |||
|library_id=CNhs13795 | |||
|library_id_phase_based=2:CNhs13795 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10169 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10169 | |||
|name=hippocampus - adult, donor10196 | |name=hippocampus - adult, donor10196 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 44: | Line 62: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0.127060011035172,0.254120022070344,0,-0.160318030086386,0.413376786607389,0.136014654413875,0.527824031535301,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0.206688393303695,0,0.156162125802287,0,0,0.734029638217867,0,0,0,0,0,0,0,0,0,0,0,0,-0.106388929871896,0.254120022070344,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.761279530076886,0.254120022070344,0.151587918777325,0.413376786607389,0.664287168834281,0,0,0.156776394857247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254120022070344,0,0.069074474317705,0,0.152029654817501,0.425101580146361,0.719606238386357,0,0.159318001079203,0.349931430742822,0.222295711302496,0,0,0,0,-0.0980353512377064,0.209969463099176,0,0,0,0,0,0,0.254120022070344,0,0,0,0,0,0,0,0,0,0,0.168449941789731,0.254120022070344,0,0,0,-0.182575461747543,0.254120022070344,0,0,0.391356424544176,0,0 | |||
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| |||
|rna_box=103 | |rna_box=103 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 78: | ||
|rna_weight_ug=67.581 | |rna_weight_ug=67.581 | ||
|sample_age=60 | |sample_age=60 | ||
|sample_category=tissues | |||
|sample_cell_catalog=NA | |sample_cell_catalog=NA | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 91: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.07827144767622e-289!GO:0005737;cytoplasm;1.74937402897429e-155!GO:0044444;cytoplasmic part;1.67256683727046e-106!GO:0043226;organelle;7.16587359855247e-94!GO:0043229;intracellular organelle;2.54705482005451e-93!GO:0043227;membrane-bound organelle;1.44671273644377e-87!GO:0043231;intracellular membrane-bound organelle;2.16925311365912e-87!GO:0032991;macromolecular complex;6.09612413556815e-66!GO:0044422;organelle part;1.5183172292598e-65!GO:0044446;intracellular organelle part;1.52902149677623e-64!GO:0005515;protein binding;1.20820988598353e-60!GO:0030529;ribonucleoprotein complex;1.54271519059298e-47!GO:0016043;cellular component organization and biogenesis;5.42741517547883e-46!GO:0005739;mitochondrion;1.03209038640245e-45!GO:0003723;RNA binding;4.87632061290596e-42!GO:0033036;macromolecule localization;2.38592619478373e-39!GO:0015031;protein transport;1.12971553929467e-38!GO:0031090;organelle membrane;5.71177330235132e-37!GO:0008104;protein localization;5.95313577783856e-36!GO:0043234;protein complex;7.93257218063466e-36!GO:0045184;establishment of protein localization;2.1218716236172e-35!GO:0044429;mitochondrial part;5.27231310154722e-34!GO:0043233;organelle lumen;2.58280504832154e-31!GO:0031974;membrane-enclosed lumen;2.58280504832154e-31!GO:0046907;intracellular transport;2.64089652119873e-31!GO:0051649;establishment of cellular localization;6.15898001637007e-29!GO:0051641;cellular localization;1.14961191171709e-28!GO:0044428;nuclear part;1.19210319092663e-28!GO:0031975;envelope;1.83697039984573e-27!GO:0031967;organelle envelope;1.98256832967628e-27!GO:0005840;ribosome;2.49967246592906e-27!GO:0019538;protein metabolic process;2.72718049046262e-27!GO:0005829;cytosol;7.9482773704109e-27!GO:0016192;vesicle-mediated transport;2.75549579022247e-26!GO:0016071;mRNA metabolic process;6.30223813441294e-25!GO:0044260;cellular macromolecule metabolic process;1.18277455655588e-24!GO:0044238;primary metabolic process;2.13224822885179e-24!GO:0006886;intracellular protein transport;7.51519266489193e-24!GO:0006396;RNA processing;8.64689135126106e-24!GO:0008380;RNA splicing;8.949421371442e-24!GO:0044237;cellular metabolic process;1.25718262834175e-23!GO:0044267;cellular protein metabolic process;1.29414474299857e-23!GO:0006412;translation;1.5917796327953e-23!GO:0003735;structural constituent of ribosome;2.11173160391311e-23!GO:0006119;oxidative phosphorylation;5.33551142737525e-23!GO:0005740;mitochondrial envelope;1.57044486330197e-22!GO:0031966;mitochondrial membrane;2.17359237523785e-22!GO:0043170;macromolecule metabolic process;7.11459058943323e-22!GO:0006397;mRNA processing;1.09306630845425e-21!GO:0019866;organelle inner membrane;6.30761871065697e-20!GO:0033279;ribosomal subunit;1.09534067584283e-19!GO:0005743;mitochondrial inner membrane;1.80016084169236e-19!GO:0009058;biosynthetic process;3.34323529719745e-19!GO:0044455;mitochondrial membrane part;8.51561308008867e-19!GO:0005794;Golgi apparatus;5.53210409771254e-18!GO:0031982;vesicle;2.00126500878089e-17!GO:0005634;nucleus;3.9880894329118e-17!GO:0009059;macromolecule biosynthetic process;4.81592090090474e-17!GO:0065003;macromolecular complex assembly;5.17043792067636e-17!GO:0031981;nuclear lumen;5.93753345897909e-17!GO:0000166;nucleotide binding;6.13330817995606e-17!GO:0044249;cellular biosynthetic process;8.52743532599191e-17!GO:0006996;organelle organization and biogenesis;1.18158112049519e-16!GO:0031410;cytoplasmic vesicle;1.21155993214996e-16!GO:0031988;membrane-bound vesicle;3.00492466542185e-16!GO:0005746;mitochondrial respiratory chain;4.53088568344733e-16!GO:0005681;spliceosome;5.26767639462865e-16!GO:0016023;cytoplasmic membrane-bound vesicle;1.59818998449269e-15!GO:0050136;NADH dehydrogenase (quinone) activity;1.6004021124644e-15!GO:0003954;NADH dehydrogenase activity;1.6004021124644e-15!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.6004021124644e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.10740674120994e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.74825184054693e-15!GO:0016462;pyrophosphatase activity;5.82862475384178e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;5.97270597745094e-15!GO:0022607;cellular component assembly;8.49668843446531e-15!GO:0044445;cytosolic part;2.22305114380057e-14!GO:0006457;protein folding;2.25591068999899e-14!GO:0017111;nucleoside-triphosphatase activity;3.23773507262834e-14!GO:0031980;mitochondrial lumen;5.49570314813641e-14!GO:0005759;mitochondrial matrix;5.49570314813641e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.50017601786547e-14!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.87235464275333e-14!GO:0030964;NADH dehydrogenase complex (quinone);1.87096544985906e-13!GO:0045271;respiratory chain complex I;1.87096544985906e-13!GO:0005747;mitochondrial respiratory chain complex I;1.87096544985906e-13!GO:0012505;endomembrane system;2.7525029354975e-13!GO:0042775;organelle ATP synthesis coupled electron transport;4.30806536771135e-13!GO:0042773;ATP synthesis coupled electron transport;4.30806536771135e-13!GO:0045045;secretory pathway;5.70878914313789e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;5.80372262522511e-13!GO:0006512;ubiquitin cycle;1.10607463733279e-12!GO:0032553;ribonucleotide binding;1.50807175843269e-12!GO:0032555;purine ribonucleotide binding;1.50807175843269e-12!GO:0022618;protein-RNA complex assembly;3.98385772121894e-12!GO:0048770;pigment granule;4.69040403764652e-12!GO:0042470;melanosome;4.69040403764652e-12!GO:0017076;purine nucleotide binding;1.26224655732632e-11!GO:0043412;biopolymer modification;2.45200151771218e-11!GO:0048193;Golgi vesicle transport;2.70343929972445e-11!GO:0016874;ligase activity;3.41722438036193e-11!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;4.46597916713112e-11!GO:0043687;post-translational protein modification;4.72311825159498e-11!GO:0019829;cation-transporting ATPase activity;7.01326580901753e-11!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;7.01326580901753e-11!GO:0006464;protein modification process;8.0236335546839e-11!GO:0005654;nucleoplasm;1.05786338822105e-10!GO:0006605;protein targeting;1.08141657178055e-10!GO:0043228;non-membrane-bound organelle;1.21782449627983e-10!GO:0043232;intracellular non-membrane-bound organelle;1.21782449627983e-10!GO:0000502;proteasome complex (sensu Eukaryota);1.54715519563914e-10!GO:0006810;transport;1.58165049805702e-10!GO:0008135;translation factor activity, nucleic acid binding;2.70447056124807e-10!GO:0015935;small ribosomal subunit;3.21161620850994e-10!GO:0051082;unfolded protein binding;3.22854700942892e-10!GO:0015934;large ribosomal subunit;3.22854700942892e-10!GO:0043283;biopolymer metabolic process;4.40786058282758e-10!GO:0044451;nucleoplasm part;7.88849772342761e-10!GO:0006793;phosphorus metabolic process;8.43849169223834e-10!GO:0006796;phosphate metabolic process;8.43849169223834e-10!GO:0005768;endosome;1.29743750964412e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.29847980829719e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;1.49403237176031e-09!GO:0008565;protein transporter activity;1.70269158072961e-09!GO:0016044;membrane organization and biogenesis;2.17943326717542e-09!GO:0006511;ubiquitin-dependent protein catabolic process;2.33151972789207e-09!GO:0019941;modification-dependent protein catabolic process;2.43611210272659e-09!GO:0043632;modification-dependent macromolecule catabolic process;2.43611210272659e-09!GO:0051179;localization;2.69329216898324e-09!GO:0003924;GTPase activity;2.72349993672286e-09!GO:0044257;cellular protein catabolic process;2.75283848996485e-09!GO:0030135;coated vesicle;3.49286662065584e-09!GO:0015986;ATP synthesis coupled proton transport;4.89129922830756e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.89129922830756e-09!GO:0032940;secretion by cell;5.31001370972542e-09!GO:0044265;cellular macromolecule catabolic process;6.56852070648594e-09!GO:0005761;mitochondrial ribosome;7.16881153170033e-09!GO:0000313;organellar ribosome;7.16881153170033e-09!GO:0007264;small GTPase mediated signal transduction;8.71323906124616e-09!GO:0051186;cofactor metabolic process;1.36823439787707e-08!GO:0006446;regulation of translational initiation;1.99119209640961e-08!GO:0010467;gene expression;2.05394937871455e-08!GO:0051234;establishment of localization;2.12417224110179e-08!GO:0008134;transcription factor binding;2.52426680689544e-08!GO:0006413;translational initiation;2.75695987297715e-08!GO:0007399;nervous system development;2.90654568353697e-08!GO:0030695;GTPase regulator activity;4.20189930158278e-08!GO:0000398;nuclear mRNA splicing, via spliceosome;5.13432402235254e-08!GO:0000375;RNA splicing, via transesterification reactions;5.13432402235254e-08!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;5.13432402235254e-08!GO:0016604;nuclear body;5.93725821937111e-08!GO:0005783;endoplasmic reticulum;6.71049295252949e-08!GO:0003743;translation initiation factor activity;6.87868060070302e-08!GO:0005525;GTP binding;6.96276669942632e-08!GO:0008092;cytoskeletal protein binding;9.28740887419269e-08!GO:0043005;neuron projection;9.28740887419269e-08!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.02843686080411e-07!GO:0032559;adenyl ribonucleotide binding;1.16289785085026e-07!GO:0043285;biopolymer catabolic process;1.67577438066047e-07!GO:0016310;phosphorylation;1.70033766893811e-07!GO:0019717;synaptosome;1.85359053001933e-07!GO:0044248;cellular catabolic process;1.91600882337173e-07!GO:0008639;small protein conjugating enzyme activity;2.23982494512021e-07!GO:0044431;Golgi apparatus part;2.24895822352535e-07!GO:0046034;ATP metabolic process;2.27479977045429e-07!GO:0009055;electron carrier activity;2.66795211128428e-07!GO:0006754;ATP biosynthetic process;2.66795211128428e-07!GO:0006753;nucleoside phosphate metabolic process;2.66795211128428e-07!GO:0009205;purine ribonucleoside triphosphate metabolic process;2.9023894742777e-07!GO:0009144;purine nucleoside triphosphate metabolic process;2.9023894742777e-07!GO:0009141;nucleoside triphosphate metabolic process;2.92229047079849e-07!GO:0004842;ubiquitin-protein ligase activity;3.07624629032846e-07!GO:0005524;ATP binding;3.11231410785477e-07!GO:0016469;proton-transporting two-sector ATPase complex;3.17725615746425e-07!GO:0009060;aerobic respiration;3.18374575822165e-07!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.18374575822165e-07!GO:0016607;nuclear speck;3.21888063114678e-07!GO:0030163;protein catabolic process;3.25980582526192e-07!GO:0005083;small GTPase regulator activity;3.26432026503174e-07!GO:0009152;purine ribonucleotide biosynthetic process;3.5885410527696e-07!GO:0006164;purine nucleotide biosynthetic process;3.65427830987329e-07!GO:0009199;ribonucleoside triphosphate metabolic process;3.66041119605149e-07!GO:0006163;purine nucleotide metabolic process;3.66041119605149e-07!GO:0009150;purine ribonucleotide metabolic process;3.91083452067935e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.03386584026511e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.03386584026511e-07!GO:0006461;protein complex assembly;6.50828987953978e-07!GO:0009142;nucleoside triphosphate biosynthetic process;6.88057832200954e-07!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.88057832200954e-07!GO:0007010;cytoskeleton organization and biogenesis;6.92253388240178e-07!GO:0030554;adenyl nucleotide binding;7.2398247743109e-07!GO:0019787;small conjugating protein ligase activity;1.03407804725938e-06!GO:0005730;nucleolus;1.07252813126701e-06!GO:0009259;ribonucleotide metabolic process;1.34199056379448e-06!GO:0045333;cellular respiration;1.36230862854418e-06!GO:0006913;nucleocytoplasmic transport;1.36230862854418e-06!GO:0009057;macromolecule catabolic process;1.54577000634191e-06!GO:0032561;guanyl ribonucleotide binding;1.5474714945105e-06!GO:0019001;guanyl nucleotide binding;1.5474714945105e-06!GO:0015078;hydrogen ion transmembrane transporter activity;1.66986020323489e-06!GO:0031965;nuclear membrane;1.74789816816895e-06!GO:0015630;microtubule cytoskeleton;1.78070409961869e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.99988063766892e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.01340526625691e-06!GO:0006732;coenzyme metabolic process;2.07614648761214e-06!GO:0051169;nuclear transport;2.11282329158208e-06!GO:0009260;ribonucleotide biosynthetic process;2.28036890720888e-06!GO:0048471;perinuclear region of cytoplasm;2.35418583796151e-06!GO:0030136;clathrin-coated vesicle;4.08165793218328e-06!GO:0044440;endosomal part;4.58518730137104e-06!GO:0010008;endosome membrane;4.58518730137104e-06!GO:0015631;tubulin binding;4.59024683514752e-06!GO:0005635;nuclear envelope;4.60684367463183e-06!GO:0016887;ATPase activity;4.84104993719623e-06!GO:0048475;coated membrane;5.2111607251496e-06!GO:0030117;membrane coat;5.2111607251496e-06!GO:0048523;negative regulation of cellular process;6.8169398971416e-06!GO:0019899;enzyme binding;7.31773858064685e-06!GO:0045259;proton-transporting ATP synthase complex;7.71415998637764e-06!GO:0000139;Golgi membrane;7.92944634539603e-06!GO:0005770;late endosome;1.08487833742564e-05!GO:0042623;ATPase activity, coupled;1.10728280028355e-05!GO:0006099;tricarboxylic acid cycle;1.21963803486676e-05!GO:0046356;acetyl-CoA catabolic process;1.21963803486676e-05!GO:0031252;leading edge;1.3458203659099e-05!GO:0008287;protein serine/threonine phosphatase complex;1.37252171755416e-05!GO:0006897;endocytosis;1.37252171755416e-05!GO:0010324;membrane invagination;1.37252171755416e-05!GO:0030036;actin cytoskeleton organization and biogenesis;1.77065345700774e-05!GO:0016881;acid-amino acid ligase activity;1.84458659756435e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.09238737746411e-05!GO:0015399;primary active transmembrane transporter activity;2.09238737746411e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;2.13127704170295e-05!GO:0005905;coated pit;2.34318444526945e-05!GO:0009109;coenzyme catabolic process;2.35998398631536e-05!GO:0051246;regulation of protein metabolic process;2.42546878185532e-05!GO:0007242;intracellular signaling cascade;2.49650653474758e-05!GO:0030425;dendrite;2.55072501561229e-05!GO:0000902;cell morphogenesis;3.77460414201397e-05!GO:0032989;cellular structure morphogenesis;3.77460414201397e-05!GO:0032446;protein modification by small protein conjugation;4.141837146619e-05!GO:0017038;protein import;4.3719581313629e-05!GO:0006084;acetyl-CoA metabolic process;4.3719581313629e-05!GO:0051187;cofactor catabolic process;4.62597230855236e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.15435207686038e-05!GO:0008047;enzyme activator activity;5.25007043413166e-05!GO:0016567;protein ubiquitination;5.67787240585734e-05!GO:0005874;microtubule;6.10348217572916e-05!GO:0000245;spliceosome assembly;6.13526290550777e-05!GO:0005769;early endosome;6.14356010120458e-05!GO:0022890;inorganic cation transmembrane transporter activity;7.55946364443003e-05!GO:0006752;group transfer coenzyme metabolic process;9.66785247944182e-05!GO:0048519;negative regulation of biological process;0.0001062928473185!GO:0044432;endoplasmic reticulum part;0.000110739304943769!GO:0005643;nuclear pore;0.000114724913234324!GO:0030120;vesicle coat;0.000115521058167563!GO:0030662;coated vesicle membrane;0.000115521058167563!GO:0051128;regulation of cellular component organization and biogenesis;0.000126611918038423!GO:0008219;cell death;0.000133750302179231!GO:0016265;death;0.000133750302179231!GO:0006403;RNA localization;0.000140568233625416!GO:0003779;actin binding;0.000151222153823896!GO:0050657;nucleic acid transport;0.00015292426473124!GO:0051236;establishment of RNA localization;0.00015292426473124!GO:0050658;RNA transport;0.00015292426473124!GO:0044453;nuclear membrane part;0.000163553419099995!GO:0030027;lamellipodium;0.000164482405435345!GO:0003712;transcription cofactor activity;0.000168701740793793!GO:0051188;cofactor biosynthetic process;0.000168701740793793!GO:0030029;actin filament-based process;0.000190115466700178!GO:0048489;synaptic vesicle transport;0.000190667549009452!GO:0043492;ATPase activity, coupled to movement of substances;0.000196142816130154!GO:0030532;small nuclear ribonucleoprotein complex;0.000197340587685403!GO:0012501;programmed cell death;0.000231193850203042!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000238032469995143!GO:0045055;regulated secretory pathway;0.000238032469995143!GO:0006915;apoptosis;0.000244529745349683!GO:0031072;heat shock protein binding;0.000287726493260587!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000310065265832332!GO:0019226;transmission of nerve impulse;0.000316446037764136!GO:0006888;ER to Golgi vesicle-mediated transport;0.000317761976748172!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000320674814638226!GO:0005798;Golgi-associated vesicle;0.000322366388617252!GO:0005096;GTPase activator activity;0.000344020156159301!GO:0048468;cell development;0.00035503008005153!GO:0008017;microtubule binding;0.000358843930827936!GO:0006613;cotranslational protein targeting to membrane;0.00037344737063094!GO:0007269;neurotransmitter secretion;0.000393002556124164!GO:0005773;vacuole;0.000393400547532404!GO:0005789;endoplasmic reticulum membrane;0.000411130563859442!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000439111438361223!GO:0022406;membrane docking;0.000461474079230154!GO:0048278;vesicle docking;0.000461474079230154!GO:0000159;protein phosphatase type 2A complex;0.000484358044540656!GO:0008654;phospholipid biosynthetic process;0.00048500509701531!GO:0016197;endosome transport;0.000517420258382381!GO:0005048;signal sequence binding;0.000518747023055537!GO:0009056;catabolic process;0.000526983537457564!GO:0016301;kinase activity;0.000566611212136209!GO:0005741;mitochondrial outer membrane;0.000651816817430152!GO:0003724;RNA helicase activity;0.000670840480808023!GO:0045786;negative regulation of progression through cell cycle;0.000711675061412045!GO:0006904;vesicle docking during exocytosis;0.000716786497229314!GO:0007265;Ras protein signal transduction;0.000733633112372434!GO:0008021;synaptic vesicle;0.000756794803659099!GO:0030133;transport vesicle;0.00079025624391599!GO:0006607;NLS-bearing substrate import into nucleus;0.000820077143548225!GO:0000151;ubiquitin ligase complex;0.000822173773761916!GO:0043069;negative regulation of programmed cell death;0.000881440459132117!GO:0019208;phosphatase regulator activity;0.000887190789392611!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000888270927345663!GO:0015980;energy derivation by oxidation of organic compounds;0.000922768457903369!GO:0043066;negative regulation of apoptosis;0.000970758583233947!GO:0043623;cellular protein complex assembly;0.000970758583233947!GO:0005793;ER-Golgi intermediate compartment;0.00098386988345037!GO:0016050;vesicle organization and biogenesis;0.00103869096198239!GO:0005839;proteasome core complex (sensu Eukaryota);0.00112957309278539!GO:0006916;anti-apoptosis;0.00114105310294661!GO:0009108;coenzyme biosynthetic process;0.00114443308652811!GO:0051028;mRNA transport;0.0012694276350387!GO:0003729;mRNA binding;0.00130249826732009!GO:0004674;protein serine/threonine kinase activity;0.00133999610355914!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00136059224642001!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00136059224642001!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00136059224642001!GO:0008601;protein phosphatase type 2A regulator activity;0.00139029384345149!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.00141456094926409!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.00143812464941335!GO:0004812;aminoacyl-tRNA ligase activity;0.00143812464941335!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.00143812464941335!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.0015984638073936!GO:0008154;actin polymerization and/or depolymerization;0.0016050153885886!GO:0031968;organelle outer membrane;0.00161105408846512!GO:0046467;membrane lipid biosynthetic process;0.00162416069931307!GO:0016311;dephosphorylation;0.00163271833379294!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00164887616640295!GO:0006606;protein import into nucleus;0.00171463854363149!GO:0006650;glycerophospholipid metabolic process;0.00171463854363149!GO:0051056;regulation of small GTPase mediated signal transduction;0.00174674237783868!GO:0006325;establishment and/or maintenance of chromatin architecture;0.00178285730413029!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00192765638698967!GO:0051170;nuclear import;0.00198775247047545!GO:0001505;regulation of neurotransmitter levels;0.00200988342734611!GO:0030118;clathrin coat;0.00203306290326071!GO:0019867;outer membrane;0.00205206684646836!GO:0043209;myelin sheath;0.00226837349009295!GO:0043038;amino acid activation;0.00228658695305855!GO:0006418;tRNA aminoacylation for protein translation;0.00228658695305855!GO:0043039;tRNA aminoacylation;0.00228658695305855!GO:0004721;phosphoprotein phosphatase activity;0.0024323613853092!GO:0043566;structure-specific DNA binding;0.00246961840638676!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00247497147219624!GO:0016564;transcription repressor activity;0.00252926186931895!GO:0008026;ATP-dependent helicase activity;0.00253828985421418!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00256702271684!GO:0004386;helicase activity;0.0025992277241373!GO:0065002;intracellular protein transport across a membrane;0.00261182427838582!GO:0031901;early endosome membrane;0.00261182427838582!GO:0030427;site of polarized growth;0.00261182427838582!GO:0016791;phosphoric monoester hydrolase activity;0.00266338307766942!GO:0006414;translational elongation;0.00266338307766942!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00271585873030951!GO:0019888;protein phosphatase regulator activity;0.00275521145421982!GO:0051087;chaperone binding;0.00281077564689633!GO:0000323;lytic vacuole;0.00291065965441962!GO:0005764;lysosome;0.00291065965441962!GO:0030030;cell projection organization and biogenesis;0.00292611022148417!GO:0048858;cell projection morphogenesis;0.00292611022148417!GO:0032990;cell part morphogenesis;0.00292611022148417!GO:0005875;microtubule associated complex;0.003048244930089!GO:0031902;late endosome membrane;0.00307598669422541!GO:0004298;threonine endopeptidase activity;0.00313139171891542!GO:0033673;negative regulation of kinase activity;0.00313845542297797!GO:0006469;negative regulation of protein kinase activity;0.00313845542297797!GO:0000314;organellar small ribosomal subunit;0.00316476088863645!GO:0005763;mitochondrial small ribosomal subunit;0.00316476088863645!GO:0006470;protein amino acid dephosphorylation;0.00316607363810512!GO:0030426;growth cone;0.00330087936712893!GO:0006891;intra-Golgi vesicle-mediated transport;0.00333379950052157!GO:0003697;single-stranded DNA binding;0.00339593683523241!GO:0005085;guanyl-nucleotide exchange factor activity;0.00352582701653595!GO:0006612;protein targeting to membrane;0.00363221276229991!GO:0009966;regulation of signal transduction;0.00368523211361181!GO:0005813;centrosome;0.0036948432415911!GO:0006323;DNA packaging;0.0042006703207592!GO:0008139;nuclear localization sequence binding;0.0043117711418908!GO:0007019;microtubule depolymerization;0.00444966200350057!GO:0006892;post-Golgi vesicle-mediated transport;0.00449380168718985!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00453091170098052!GO:0007017;microtubule-based process;0.00458345716353861!GO:0005516;calmodulin binding;0.00468874533895904!GO:0005762;mitochondrial large ribosomal subunit;0.00479593874388884!GO:0000315;organellar large ribosomal subunit;0.00479593874388884!GO:0007268;synaptic transmission;0.00479593874388884!GO:0051427;hormone receptor binding;0.00494770505029792!GO:0007243;protein kinase cascade;0.0050164136141546!GO:0022008;neurogenesis;0.0050164136141546!GO:0048487;beta-tubulin binding;0.0050164136141546!GO:0050767;regulation of neurogenesis;0.00519300938284338!GO:0003714;transcription corepressor activity;0.00523166553984717!GO:0048699;generation of neurons;0.0054078122749754!GO:0005885;Arp2/3 protein complex;0.00552903098166002!GO:0042254;ribosome biogenesis and assembly;0.00562144402043525!GO:0046870;cadmium ion binding;0.00599214594585106!GO:0016568;chromatin modification;0.00617065572839947!GO:0008186;RNA-dependent ATPase activity;0.006214096557939!GO:0051168;nuclear export;0.006214096557939!GO:0006259;DNA metabolic process;0.00641239274944665!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0064452611153893!GO:0019198;transmembrane receptor protein phosphatase activity;0.0064452611153893!GO:0043021;ribonucleoprotein binding;0.00662429579572767!GO:0051348;negative regulation of transferase activity;0.00662796463315231!GO:0051540;metal cluster binding;0.00672022665752866!GO:0051536;iron-sulfur cluster binding;0.00672022665752866!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00683651719238019!GO:0046930;pore complex;0.00690729674534117!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00697292382455486!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00720820712925161!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00720820712925161!GO:0030424;axon;0.00723378674991568!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00726956489406642!GO:0004667;prostaglandin-D synthase activity;0.00726956489406642!GO:0050802;circadian sleep/wake cycle, sleep;0.00726956489406642!GO:0022410;circadian sleep/wake cycle process;0.00726956489406642!GO:0042749;regulation of circadian sleep/wake cycle;0.00726956489406642!GO:0019887;protein kinase regulator activity;0.00771427957480533!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.007795161572593!GO:0035257;nuclear hormone receptor binding;0.00821220160595783!GO:0006091;generation of precursor metabolites and energy;0.00879949910638466!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00888912688425393!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00888912688425393!GO:0055083;monovalent inorganic anion homeostasis;0.00888912688425393!GO:0055064;chloride ion homeostasis;0.00888912688425393!GO:0030644;cellular chloride ion homeostasis;0.00888912688425393!GO:0030041;actin filament polymerization;0.00889976103761083!GO:0016740;transferase activity;0.00898994586872311!GO:0007005;mitochondrion organization and biogenesis;0.00911554098919702!GO:0030384;phosphoinositide metabolic process;0.00920628878269247!GO:0031124;mRNA 3'-end processing;0.00931522358966154!GO:0005938;cell cortex;0.00938206003875765!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00953418385820695!GO:0012506;vesicle membrane;0.00958499863485972!GO:0001578;microtubule bundle formation;0.00961058263871768!GO:0050811;GABA receptor binding;0.00969397029253337!GO:0051726;regulation of cell cycle;0.0100192604169429!GO:0048500;signal recognition particle;0.0100331908181248!GO:0016859;cis-trans isomerase activity;0.0100596591831978!GO:0051920;peroxiredoxin activity;0.0102691992834337!GO:0048167;regulation of synaptic plasticity;0.0103738525932235!GO:0019902;phosphatase binding;0.0104516403008566!GO:0009117;nucleotide metabolic process;0.0108106622227047!GO:0000904;cellular morphogenesis during differentiation;0.0108757668834269!GO:0031175;neurite development;0.0111945501182291!GO:0005774;vacuolar membrane;0.0111945501182291!GO:0030182;neuron differentiation;0.0113586602355998!GO:0016126;sterol biosynthetic process;0.0114158119412718!GO:0043086;negative regulation of catalytic activity;0.0115315358919051!GO:0005869;dynactin complex;0.0116301748052499!GO:0046488;phosphatidylinositol metabolic process;0.0119273509695847!GO:0048666;neuron development;0.0119750380804071!GO:0031114;regulation of microtubule depolymerization;0.0120632805779258!GO:0007026;negative regulation of microtubule depolymerization;0.0120632805779258!GO:0019904;protein domain specific binding;0.0121750083915293!GO:0006818;hydrogen transport;0.0121978339454818!GO:0006887;exocytosis;0.0122731049662803!GO:0005815;microtubule organizing center;0.0123959909445497!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0126644036673783!GO:0046578;regulation of Ras protein signal transduction;0.0127650598529745!GO:0001726;ruffle;0.0129998319064036!GO:0030867;rough endoplasmic reticulum membrane;0.0134468469379305!GO:0004722;protein serine/threonine phosphatase activity;0.0134468469379305!GO:0007611;learning and/or memory;0.0134468469379305!GO:0003713;transcription coactivator activity;0.0139063415276938!GO:0000074;regulation of progression through cell cycle;0.0139211672470949!GO:0007034;vacuolar transport;0.0139264374190761!GO:0048667;neuron morphogenesis during differentiation;0.0139264374190761!GO:0048812;neurite morphogenesis;0.0139264374190761!GO:0006643;membrane lipid metabolic process;0.0140187120596652!GO:0051261;protein depolymerization;0.0141959378009267!GO:0030258;lipid modification;0.0146098095959208!GO:0004004;ATP-dependent RNA helicase activity;0.014692048884356!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0146992164469894!GO:0050839;cell adhesion molecule binding;0.0152565959355235!GO:0009165;nucleotide biosynthetic process;0.0153449053493367!GO:0046474;glycerophospholipid biosynthetic process;0.0153672487504417!GO:0006402;mRNA catabolic process;0.0156232030818601!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0158226433923089!GO:0009066;aspartate family amino acid metabolic process;0.0159474556536768!GO:0019207;kinase regulator activity;0.0159773033370779!GO:0015992;proton transport;0.016111027484069!GO:0006366;transcription from RNA polymerase II promoter;0.0165058850620267!GO:0016272;prefoldin complex;0.016599844064226!GO:0030137;COPI-coated vesicle;0.0174884546898808!GO:0043681;protein import into mitochondrion;0.0175040877454724!GO:0044433;cytoplasmic vesicle part;0.0177315625422046!GO:0007272;ensheathment of neurons;0.0177315625422046!GO:0008366;axon ensheathment;0.0177315625422046!GO:0008361;regulation of cell size;0.0179193584170618!GO:0008250;oligosaccharyl transferase complex;0.0181222677923942!GO:0007049;cell cycle;0.0187273219137016!GO:0003746;translation elongation factor activity;0.0187273219137016!GO:0050803;regulation of synapse structure and activity;0.0188584393851219!GO:0001508;regulation of action potential;0.0188856644117672!GO:0005791;rough endoplasmic reticulum;0.0192963136383762!GO:0044448;cell cortex part;0.0204463415900684!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.020534257439384!GO:0043284;biopolymer biosynthetic process;0.0207064373063015!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0210341858907229!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0214390289378094!GO:0045047;protein targeting to ER;0.0214390289378094!GO:0031371;ubiquitin conjugating enzyme complex;0.0219811506571558!GO:0042026;protein refolding;0.0221104997229276!GO:0005868;cytoplasmic dynein complex;0.0225948950423307!GO:0030660;Golgi-associated vesicle membrane;0.0230893541470426!GO:0046903;secretion;0.0230893541470426!GO:0030742;GTP-dependent protein binding;0.024039055851752!GO:0030658;transport vesicle membrane;0.0247906414422972!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0257825890461928!GO:0035035;histone acetyltransferase binding;0.0257825890461928!GO:0008312;7S RNA binding;0.028105024377797!GO:0004576;oligosaccharyl transferase activity;0.0284049954034589!GO:0019903;protein phosphatase binding;0.028526561024547!GO:0016049;cell growth;0.0291522343197619!GO:0006665;sphingolipid metabolic process;0.0291739087203711!GO:0031123;RNA 3'-end processing;0.0291795530654402!GO:0006333;chromatin assembly or disassembly;0.0302872132550231!GO:0044437;vacuolar part;0.0302908635361733!GO:0030132;clathrin coat of coated pit;0.0304170316453784!GO:0019894;kinesin binding;0.0304170316453784!GO:0000096;sulfur amino acid metabolic process;0.030963779959122!GO:0000059;protein import into nucleus, docking;0.0328883801502825!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0331999409065005!GO:0015002;heme-copper terminal oxidase activity;0.0331999409065005!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0331999409065005!GO:0004129;cytochrome-c oxidase activity;0.0331999409065005!GO:0007006;mitochondrial membrane organization and biogenesis;0.0348155170846569!GO:0008320;protein transmembrane transporter activity;0.0348925953044361!GO:0035258;steroid hormone receptor binding;0.0348925953044361!GO:0006611;protein export from nucleus;0.0348925953044361!GO:0016079;synaptic vesicle exocytosis;0.0350955028292927!GO:0042670;retinal cone cell differentiation;0.0355049763666722!GO:0051281;positive regulation of release of sequestered calcium ion into cytosol;0.0355049763666722!GO:0046549;retinal cone cell development;0.0355049763666722!GO:0008088;axon cargo transport;0.0361701398922037!GO:0043407;negative regulation of MAP kinase activity;0.0367002482950097!GO:0008180;signalosome;0.0367002482950097!GO:0000209;protein polyubiquitination;0.0370692588682239!GO:0008610;lipid biosynthetic process;0.0370715069789393!GO:0051287;NAD binding;0.0370999084786452!GO:0005765;lysosomal membrane;0.0372022393356705!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0372022393356705!GO:0006695;cholesterol biosynthetic process;0.0374857798537905!GO:0004423;iduronate-2-sulfatase activity;0.0375660538556466!GO:0044456;synapse part;0.0377248274366796!GO:0006383;transcription from RNA polymerase III promoter;0.0384445117476792!GO:0006974;response to DNA damage stimulus;0.0384445117476792!GO:0032287;myelin maintenance in the peripheral nervous system;0.0384445117476792!GO:0032838;cell projection cytoplasm;0.0384445117476792!GO:0033081;regulation of T cell differentiation in the thymus;0.0384445117476792!GO:0043217;myelin maintenance;0.0384445117476792!GO:0060087;relaxation of vascular smooth muscle;0.0384445117476792!GO:0032839;dendrite cytoplasm;0.0384445117476792!GO:0030911;TPR domain binding;0.0388263689164341!GO:0007041;lysosomal transport;0.0394689600350564!GO:0042578;phosphoric ester hydrolase activity;0.0395399908624021!GO:0007409;axonogenesis;0.0399631368121808!GO:0051789;response to protein stimulus;0.0399631368121808!GO:0006986;response to unfolded protein;0.0399631368121808!GO:0065009;regulation of a molecular function;0.0403335869137032!GO:0032011;ARF protein signal transduction;0.0407643627837914!GO:0032012;regulation of ARF protein signal transduction;0.0407643627837914!GO:0007266;Rho protein signal transduction;0.0409237937304655!GO:0045296;cadherin binding;0.0409237937304655!GO:0005100;Rho GTPase activator activity;0.0410413949247844!GO:0030125;clathrin vesicle coat;0.0412258090489032!GO:0030665;clathrin coated vesicle membrane;0.0412258090489032!GO:0042995;cell projection;0.0415934503147173!GO:0031109;microtubule polymerization or depolymerization;0.0415934503147173!GO:0006399;tRNA metabolic process;0.0415934503147173!GO:0030659;cytoplasmic vesicle membrane;0.0428214399479053!GO:0016579;protein deubiquitination;0.0429219329816682!GO:0019911;structural constituent of myelin sheath;0.0433064411682592!GO:0006713;glucocorticoid catabolic process;0.0433374997691015!GO:0009892;negative regulation of metabolic process;0.0433433996782345!GO:0051539;4 iron, 4 sulfur cluster binding;0.0452735994109296!GO:0006672;ceramide metabolic process;0.0457547513552606!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0459073817157096!GO:0033043;regulation of organelle organization and biogenesis;0.0459073817157096!GO:0008286;insulin receptor signaling pathway;0.0460804804393947!GO:0004683;calmodulin-dependent protein kinase activity;0.0463081591496118!GO:0030641;cellular hydrogen ion homeostasis;0.0467254060668092!GO:0005099;Ras GTPase activator activity;0.0477903127838849!GO:0007612;learning;0.0479300166255403!GO:0004183;carboxypeptidase E activity;0.0484994372602614!GO:0030070;insulin processing;0.0484994372602614!GO:0030054;cell junction;0.0485417616104005!GO:0046839;phospholipid dephosphorylation;0.0487830527851847!GO:0016070;RNA metabolic process;0.0495287136268692!GO:0007033;vacuole organization and biogenesis;0.0496968042448695 | |||
|sample_id=10169 | |sample_id=10169 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 99: | ||
|sample_tissue=hippocampus | |sample_tissue=hippocampus | ||
|top_motifs=HOXA9_MEIS1:4.43181532831;DBP:4.41469385575;CUX2:3.6507204194;HBP1_HMGB_SSRP1_UBTF:3.54237774868;REST:3.27086878711;NHLH1,2:3.20857854082;RFX1:3.0222917727;PRRX1,2:3.01454227823;MYFfamily:3.01130765603;RREB1:2.99938305888;ZFP161:2.98423557951;ZBTB6:2.95218217759;OCT4_SOX2{dimer}:2.93542437119;AHR_ARNT_ARNT2:2.93232965709;FOXD3:2.8458488298;NKX3-2:2.74289912872;RFX2..5_RFXANK_RFXAP:2.73814406247;MED-1{core}:2.68497493035;EGR1..3:2.65397055765;POU5F1:2.63281725279;SOX5:2.58807796636;PRDM1:2.51625407745;ATF2:2.46115305484;NFIX:2.42012028109;GATA4:2.3328303196;MTE{core}:2.32017909279;POU6F1:2.29068499816;MTF1:2.2395560523;HOX{A4,D4}:2.22379718243;HMGA1,2:2.20966780203;GTF2I:2.19435322692;SOX2:2.10786764525;PAX4:2.0415033191;KLF4:2.03600154971;GFI1B:2.02014219899;MZF1:1.99751882374;NANOG:1.79831767448;FOXM1:1.76425797432;FOXP1:1.75802828465;ZNF384:1.75325069526;TFAP2B:1.74633887592;TGIF1:1.71342901255;NKX2-3_NKX2-5:1.71317159724;IKZF2:1.67986817553;NKX6-1,2:1.67141972276;SMAD1..7,9:1.65097869057;JUN:1.63911981631;FOXP3:1.63285503443;PAX6:1.63113101331;SOX17:1.62030492286;HAND1,2:1.61385546328;HIC1:1.59848504175;BREu{core}:1.55764149816;PAX5:1.52649661338;NRF1:1.52047668899;ARID5B:1.50525147732;LMO2:1.47751370554;FOX{F1,F2,J1}:1.45302499683;SOX{8,9,10}:1.39533225261;MAFB:1.37474501865;ZBTB16:1.35240418755;CDC5L:1.33085296005;PATZ1:1.27315298796;LEF1_TCF7_TCF7L1,2:1.26963205856;MAZ:1.24060650181;ZIC1..3:1.13565970631;ADNP_IRX_SIX_ZHX:1.02530642918;XBP1:0.974824397279;POU1F1:0.970835684899;POU3F1..4:0.946679429666;STAT2,4,6:0.917640060499;LHX3,4:0.91205706008;BPTF:0.900640029424;TFDP1:0.884889495263;HOX{A6,A7,B6,B7}:0.775186268496;TEF:0.696096689509;FOXA2:0.643047255163;T:0.630897478929;MYBL2:0.627410034557;NR3C1:0.613484183046;HMX1:0.613398244953;CREB1:0.57345786705;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.558793861088;TLX1..3_NFIC{dimer}:0.524414979394;EBF1:0.52267511261;IRF7:0.513422449885;SP1:0.474411774038;SREBF1,2:0.46194429804;ONECUT1,2:0.436202437099;STAT1,3:0.435738370332;ESRRA:0.427155479431;EP300:0.39714503426;SPZ1:0.396748315115;ZNF143:0.394861069206;ZEB1:0.393040133607;RBPJ:0.370015455436;FOXQ1:0.368727754414;GTF2A1,2:0.348908032511;FOXN1:0.312929809805;AR:0.311770988372;FOXL1:0.294165878547;TLX2:0.292586943532;MEF2{A,B,C,D}:0.28441664751;ZNF423:0.282640774031;CRX:0.270921679253;YY1:0.268134606968;TFAP2{A,C}:0.252382114836;NFIL3:0.231804622751;VSX1,2:0.228837827837;GFI1:0.20569327778;DMAP1_NCOR{1,2}_SMARC:0.199096319843;PBX1:0.197870545857;MYOD1:0.188424243214;UFEwm:0.177614816832;GZF1:0.17251903218;ATF5_CREB3:0.148323902051;GCM1,2:0.138265014162;RORA:0.11564728535;NKX3-1:0.115109294487;FOX{I1,J2}:0.0698296768759;IKZF1:0.0251398819228;PAX1,9:-0.00198209811956;FOX{D1,D2}:-0.0348154805785;IRF1,2:-0.0468676830312;CEBPA,B_DDIT3:-0.118168688375;PDX1:-0.169079486511;NFATC1..3:-0.172954842795;PAX2:-0.17541068566;PAX3,7:-0.184873762626;NFE2L2:-0.186707699771;ATF4:-0.243148986005;ATF6:-0.275788481709;EVI1:-0.298745052867;TOPORS:-0.300484206959;NANOG{mouse}:-0.335871905332;PITX1..3:-0.354369391664;SPI1:-0.376429182578;ALX1:-0.378124728353;TBX4,5:-0.417117280777;NFY{A,B,C}:-0.485731790565;ZNF238:-0.486707067672;FOXO1,3,4:-0.494952982418;SPIB:-0.496857855374;NFE2:-0.510923762723;GATA6:-0.521728290866;NFE2L1:-0.579717536781;SNAI1..3:-0.673836721779;PAX8:-0.683372009275;AIRE:-0.721763768454;TBP:-0.769804363592;FOSL2:-0.814600345799;HIF1A:-0.878274214102;HNF1A:-0.906622562623;ETS1,2:-0.942918724821;HNF4A_NR2F1,2:-0.944878276652;FOS_FOS{B,L1}_JUN{B,D}:-0.948916110657;POU2F1..3:-0.953871355345;CDX1,2,4:-0.965808782601;MYB:-0.984162687752;BACH2:-0.990588092361;bHLH_family:-0.994535367198;TAL1_TCF{3,4,12}:-1.03260379178;TFCP2:-1.09693134787;TEAD1:-1.10220945064;XCPE1{core}:-1.12824352318;TP53:-1.13531064672;RUNX1..3:-1.15982843922;NKX2-2,8:-1.17514907902;NKX2-1,4:-1.20233249093;ZNF148:-1.21846559137;HSF1,2:-1.27670685281;HLF:-1.28936784463;NFKB1_REL_RELA:-1.30629911172;E2F1..5:-1.33926639794;NR5A1,2:-1.46137211622;NR6A1:-1.49391468465;RXRA_VDR{dimer}:-1.50002645789;TFAP4:-1.51444314178;ELF1,2,4:-1.51638115945;ELK1,4_GABP{A,B1}:-1.5472042377;SRF:-1.57951391243;RXR{A,B,G}:-1.66260375067;GLI1..3:-1.69003448172;ESR1:-1.74747544066;NR1H4:-1.77476640753;HOX{A5,B5}:-1.7937345181;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.82911616627;ALX4:-1.83269162819;HES1:-2.13986257961;EN1,2:-2.21640521474;PPARG:-2.33120160387;STAT5{A,B}:-2.74150282507 | |top_motifs=HOXA9_MEIS1:4.43181532831;DBP:4.41469385575;CUX2:3.6507204194;HBP1_HMGB_SSRP1_UBTF:3.54237774868;REST:3.27086878711;NHLH1,2:3.20857854082;RFX1:3.0222917727;PRRX1,2:3.01454227823;MYFfamily:3.01130765603;RREB1:2.99938305888;ZFP161:2.98423557951;ZBTB6:2.95218217759;OCT4_SOX2{dimer}:2.93542437119;AHR_ARNT_ARNT2:2.93232965709;FOXD3:2.8458488298;NKX3-2:2.74289912872;RFX2..5_RFXANK_RFXAP:2.73814406247;MED-1{core}:2.68497493035;EGR1..3:2.65397055765;POU5F1:2.63281725279;SOX5:2.58807796636;PRDM1:2.51625407745;ATF2:2.46115305484;NFIX:2.42012028109;GATA4:2.3328303196;MTE{core}:2.32017909279;POU6F1:2.29068499816;MTF1:2.2395560523;HOX{A4,D4}:2.22379718243;HMGA1,2:2.20966780203;GTF2I:2.19435322692;SOX2:2.10786764525;PAX4:2.0415033191;KLF4:2.03600154971;GFI1B:2.02014219899;MZF1:1.99751882374;NANOG:1.79831767448;FOXM1:1.76425797432;FOXP1:1.75802828465;ZNF384:1.75325069526;TFAP2B:1.74633887592;TGIF1:1.71342901255;NKX2-3_NKX2-5:1.71317159724;IKZF2:1.67986817553;NKX6-1,2:1.67141972276;SMAD1..7,9:1.65097869057;JUN:1.63911981631;FOXP3:1.63285503443;PAX6:1.63113101331;SOX17:1.62030492286;HAND1,2:1.61385546328;HIC1:1.59848504175;BREu{core}:1.55764149816;PAX5:1.52649661338;NRF1:1.52047668899;ARID5B:1.50525147732;LMO2:1.47751370554;FOX{F1,F2,J1}:1.45302499683;SOX{8,9,10}:1.39533225261;MAFB:1.37474501865;ZBTB16:1.35240418755;CDC5L:1.33085296005;PATZ1:1.27315298796;LEF1_TCF7_TCF7L1,2:1.26963205856;MAZ:1.24060650181;ZIC1..3:1.13565970631;ADNP_IRX_SIX_ZHX:1.02530642918;XBP1:0.974824397279;POU1F1:0.970835684899;POU3F1..4:0.946679429666;STAT2,4,6:0.917640060499;LHX3,4:0.91205706008;BPTF:0.900640029424;TFDP1:0.884889495263;HOX{A6,A7,B6,B7}:0.775186268496;TEF:0.696096689509;FOXA2:0.643047255163;T:0.630897478929;MYBL2:0.627410034557;NR3C1:0.613484183046;HMX1:0.613398244953;CREB1:0.57345786705;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.558793861088;TLX1..3_NFIC{dimer}:0.524414979394;EBF1:0.52267511261;IRF7:0.513422449885;SP1:0.474411774038;SREBF1,2:0.46194429804;ONECUT1,2:0.436202437099;STAT1,3:0.435738370332;ESRRA:0.427155479431;EP300:0.39714503426;SPZ1:0.396748315115;ZNF143:0.394861069206;ZEB1:0.393040133607;RBPJ:0.370015455436;FOXQ1:0.368727754414;GTF2A1,2:0.348908032511;FOXN1:0.312929809805;AR:0.311770988372;FOXL1:0.294165878547;TLX2:0.292586943532;MEF2{A,B,C,D}:0.28441664751;ZNF423:0.282640774031;CRX:0.270921679253;YY1:0.268134606968;TFAP2{A,C}:0.252382114836;NFIL3:0.231804622751;VSX1,2:0.228837827837;GFI1:0.20569327778;DMAP1_NCOR{1,2}_SMARC:0.199096319843;PBX1:0.197870545857;MYOD1:0.188424243214;UFEwm:0.177614816832;GZF1:0.17251903218;ATF5_CREB3:0.148323902051;GCM1,2:0.138265014162;RORA:0.11564728535;NKX3-1:0.115109294487;FOX{I1,J2}:0.0698296768759;IKZF1:0.0251398819228;PAX1,9:-0.00198209811956;FOX{D1,D2}:-0.0348154805785;IRF1,2:-0.0468676830312;CEBPA,B_DDIT3:-0.118168688375;PDX1:-0.169079486511;NFATC1..3:-0.172954842795;PAX2:-0.17541068566;PAX3,7:-0.184873762626;NFE2L2:-0.186707699771;ATF4:-0.243148986005;ATF6:-0.275788481709;EVI1:-0.298745052867;TOPORS:-0.300484206959;NANOG{mouse}:-0.335871905332;PITX1..3:-0.354369391664;SPI1:-0.376429182578;ALX1:-0.378124728353;TBX4,5:-0.417117280777;NFY{A,B,C}:-0.485731790565;ZNF238:-0.486707067672;FOXO1,3,4:-0.494952982418;SPIB:-0.496857855374;NFE2:-0.510923762723;GATA6:-0.521728290866;NFE2L1:-0.579717536781;SNAI1..3:-0.673836721779;PAX8:-0.683372009275;AIRE:-0.721763768454;TBP:-0.769804363592;FOSL2:-0.814600345799;HIF1A:-0.878274214102;HNF1A:-0.906622562623;ETS1,2:-0.942918724821;HNF4A_NR2F1,2:-0.944878276652;FOS_FOS{B,L1}_JUN{B,D}:-0.948916110657;POU2F1..3:-0.953871355345;CDX1,2,4:-0.965808782601;MYB:-0.984162687752;BACH2:-0.990588092361;bHLH_family:-0.994535367198;TAL1_TCF{3,4,12}:-1.03260379178;TFCP2:-1.09693134787;TEAD1:-1.10220945064;XCPE1{core}:-1.12824352318;TP53:-1.13531064672;RUNX1..3:-1.15982843922;NKX2-2,8:-1.17514907902;NKX2-1,4:-1.20233249093;ZNF148:-1.21846559137;HSF1,2:-1.27670685281;HLF:-1.28936784463;NFKB1_REL_RELA:-1.30629911172;E2F1..5:-1.33926639794;NR5A1,2:-1.46137211622;NR6A1:-1.49391468465;RXRA_VDR{dimer}:-1.50002645789;TFAP4:-1.51444314178;ELF1,2,4:-1.51638115945;ELK1,4_GABP{A,B1}:-1.5472042377;SRF:-1.57951391243;RXR{A,B,G}:-1.66260375067;GLI1..3:-1.69003448172;ESR1:-1.74747544066;NR1H4:-1.77476640753;HOX{A5,B5}:-1.7937345181;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.82911616627;ALX4:-1.83269162819;HES1:-2.13986257961;EN1,2:-2.21640521474;PPARG:-2.33120160387;STAT5{A,B}:-2.74150282507 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10169-103B7;search_select_hide=table117:FF:10169-103B7 | |||
}} | }} | ||
Latest revision as of 12:24, 3 June 2020
| Name: | hippocampus - adult, donor10196 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13795 |
| Sample type: | tissues |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13795
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13795
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0771 |
| 10 | 10 | 0.0521 |
| 100 | 100 | 0.368 |
| 101 | 101 | 0.241 |
| 102 | 102 | 0.897 |
| 103 | 103 | 0.221 |
| 104 | 104 | 0.168 |
| 105 | 105 | 0.136 |
| 106 | 106 | 0.0302 |
| 107 | 107 | 0.105 |
| 108 | 108 | 0.981 |
| 109 | 109 | 0.00146 |
| 11 | 11 | 0.0124 |
| 110 | 110 | 0.0493 |
| 111 | 111 | 0.281 |
| 112 | 112 | 0.594 |
| 113 | 113 | 0.378 |
| 114 | 114 | 0.325 |
| 115 | 115 | 0.854 |
| 116 | 116 | 0.063 |
| 117 | 117 | 0.00618 |
| 118 | 118 | 0.123 |
| 119 | 119 | 0.223 |
| 12 | 12 | 0.505 |
| 120 | 120 | 0.23 |
| 121 | 121 | 0.0772 |
| 122 | 122 | 0.725 |
| 123 | 123 | 0.897 |
| 124 | 124 | 0.0282 |
| 125 | 125 | 0.348 |
| 126 | 126 | 0.0223 |
| 127 | 127 | 0.425 |
| 128 | 128 | 0.206 |
| 129 | 129 | 0.485 |
| 13 | 13 | 6.77604e-4 |
| 130 | 130 | 0.135 |
| 131 | 131 | 0.0836 |
| 132 | 132 | 0.677 |
| 133 | 133 | 0.0012 |
| 134 | 134 | 0.366 |
| 135 | 135 | 0.0659 |
| 136 | 136 | 5.85162e-4 |
| 137 | 137 | 0.868 |
| 138 | 138 | 0.892 |
| 139 | 139 | 0.15 |
| 14 | 14 | 0.808 |
| 140 | 140 | 0.503 |
| 141 | 141 | 0.514 |
| 142 | 142 | 0.666 |
| 143 | 143 | 0.0926 |
| 144 | 144 | 0.79 |
| 145 | 145 | 0.0913 |
| 146 | 146 | 0.331 |
| 147 | 147 | 0.795 |
| 148 | 148 | 0.265 |
| 149 | 149 | 0.205 |
| 15 | 15 | 0.111 |
| 150 | 150 | 0.134 |
| 151 | 151 | 0.568 |
| 152 | 152 | 0.0561 |
| 153 | 153 | 0.609 |
| 154 | 154 | 0.313 |
| 155 | 155 | 0.727 |
| 156 | 156 | 0.339 |
| 157 | 157 | 0.406 |
| 158 | 158 | 0.233 |
| 159 | 159 | 0.0274 |
| 16 | 16 | 0.0494 |
| 160 | 160 | 0.275 |
| 161 | 161 | 0.251 |
| 162 | 162 | 0.707 |
| 163 | 163 | 0.918 |
| 164 | 164 | 0.0132 |
| 165 | 165 | 0.0484 |
| 166 | 166 | 0.696 |
| 167 | 167 | 0.685 |
| 168 | 168 | 0.295 |
| 169 | 169 | 0.0132 |
| 17 | 17 | 0.113 |
| 18 | 18 | 0.159 |
| 19 | 19 | 0.187 |
| 2 | 2 | 0.73 |
| 20 | 20 | 0.133 |
| 21 | 21 | 0.0773 |
| 22 | 22 | 0.152 |
| 23 | 23 | 0.401 |
| 24 | 24 | 0.0152 |
| 25 | 25 | 0.605 |
| 26 | 26 | 3.36067e-5 |
| 27 | 27 | 0.989 |
| 28 | 28 | 0.744 |
| 29 | 29 | 0.0091 |
| 3 | 3 | 0.0544 |
| 30 | 30 | 0.922 |
| 31 | 31 | 0.957 |
| 32 | 32 | 0.0416 |
| 33 | 33 | 0.0423 |
| 34 | 34 | 0.7 |
| 35 | 35 | 0.733 |
| 36 | 36 | 0.289 |
| 37 | 37 | 0.0305 |
| 38 | 38 | 0.261 |
| 39 | 39 | 0.249 |
| 4 | 4 | 0.895 |
| 40 | 40 | 0.0364 |
| 41 | 41 | 0.441 |
| 42 | 42 | 0.277 |
| 43 | 43 | 0.121 |
| 44 | 44 | 0.154 |
| 45 | 45 | 0.591 |
| 46 | 46 | 0.0738 |
| 47 | 47 | 0.0541 |
| 48 | 48 | 0.0377 |
| 49 | 49 | 0.21 |
| 5 | 5 | 0.78 |
| 50 | 50 | 0.173 |
| 51 | 51 | 0.523 |
| 52 | 52 | 0.536 |
| 53 | 53 | 0.836 |
| 54 | 54 | 0.348 |
| 55 | 55 | 0.771 |
| 56 | 56 | 0.53 |
| 57 | 57 | 0.41 |
| 58 | 58 | 0.406 |
| 59 | 59 | 0.0394 |
| 6 | 6 | 0.917 |
| 60 | 60 | 0.0755 |
| 61 | 61 | 0.049 |
| 62 | 62 | 0.268 |
| 63 | 63 | 0.163 |
| 64 | 64 | 0.191 |
| 65 | 65 | 0.224 |
| 66 | 66 | 0.121 |
| 67 | 67 | 0.224 |
| 68 | 68 | 0.149 |
| 69 | 69 | 0.559 |
| 7 | 7 | 0.0565 |
| 70 | 70 | 0.037 |
| 71 | 71 | 0.0127 |
| 72 | 72 | 0.311 |
| 73 | 73 | 0.0203 |
| 74 | 74 | 0.917 |
| 75 | 75 | 0.0191 |
| 76 | 76 | 0.42 |
| 77 | 77 | 0.125 |
| 78 | 78 | 4.49413e-4 |
| 79 | 79 | 0.338 |
| 8 | 8 | 0.108 |
| 80 | 80 | 0.436 |
| 81 | 81 | 0.825 |
| 82 | 82 | 0.682 |
| 83 | 83 | 0.012 |
| 84 | 84 | 0.535 |
| 85 | 85 | 0.272 |
| 86 | 86 | 0.154 |
| 87 | 87 | 8.1062e-5 |
| 88 | 88 | 0.766 |
| 89 | 89 | 0.5 |
| 9 | 9 | 0.363 |
| 90 | 90 | 0.265 |
| 91 | 91 | 0.843 |
| 92 | 92 | 0.841 |
| 93 | 93 | 0.497 |
| 94 | 94 | 0.426 |
| 95 | 95 | 0.00833 |
| 96 | 96 | 0.775 |
| 97 | 97 | 0.599 |
| 98 | 98 | 0.351 |
| 99 | 99 | 0.43 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13795
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0010153 hippocampus - adult sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001954 (Ammon's horn)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0003022 (lobe parts of cerebral cortex)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0002421 (hippocampal formation)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0000349 (limbic system)
0002600 (limbic lobe)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010153 (hippocampus - adult sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA
