FF:12382-131E6: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00004991 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00004991 | ||
|accession_numbers=CAGE;DRX008590;DRR009462;DRZ000887;DRZ002272;DRZ012237;DRZ013622 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX037272;DRR041638;DRZ007280 | |||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000055,UBERON:0004111,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0002049,UBERON:0007798,UBERON:0001473,UBERON:0002465,UBERON:0004535,UBERON:0004536,UBERON:0006558,UBERON:0002193,UBERON:0002405,UBERON:0001009 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002139,CL:0000213,CL:0002078,CL:0000215,CL:0000255,CL:0000115,CL:0002138 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000046,FF:0000001,FF:0000350,FF:0000049,FF:0000341,FF:0000344,FF:0000410 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|donor= biol_rep2 | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 45: | ||
|fonse_treatment_closure=EFO:0000369,FF:0000341,FF:0000410,FF:12382-131E6 | |fonse_treatment_closure=EFO:0000369,FF:0000341,FF:0000410,FF:12382-131E6 | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep2%2520%2528MM%2520XIV%2520-%25201%2529.CNhs13157.12382-131E6.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep2%2520%2528MM%2520XIV%2520-%25201%2529.CNhs13157.12382-131E6.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep2%2520%2528MM%2520XIV%2520-%25201%2529.CNhs13157.12382-131E6.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep2%2520%2528MM%2520XIV%2520-%25201%2529.CNhs13157.12382-131E6.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.timecourse.hCAGE/Lymphatic%2520Endothelial%2520cells%2520response%2520to%2520VEGFC%252c%252000hr00min%252c%2520biol_rep2%2520%2528MM%2520XIV%2520-%25201%2529.CNhs13157.12382-131E6.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:12382-131E6 | |id=FF:12382-131E6 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000410 | ||
|name=Lymphatic Endothelial cells response to VEGFC | |is_obsolete= | ||
|library_id=CNhs13157 | |||
|library_id_phase_based=2:CNhs13157 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12382 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10062.GTAGAG.12382 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12382 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10062.GTAGAG.12382 | |||
|name=Lymphatic Endothelial cells response to VEGFC | |||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
|part_of= | |part_of= | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs13157,LSID1002,release013,COMPLETED | |profile_hcage=CNhs13157,LSID1002,release013,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
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| |||
|rna_box=131 | |rna_box=131 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 54: | Line 81: | ||
|rna_rin= | |rna_rin= | ||
|rna_sample_type= | |rna_sample_type= | ||
|rna_tube_id= | |rna_tube_id=1.31E+08 | ||
|rna_weight_ug=9.66 | |rna_weight_ug=9.66 | ||
|rnaseq_library_id=SRhi10062.GTAGAG | |||
|sample_age= | |sample_age= | ||
|sample_category=time courses | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 98: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition=Lymphatic Endothelial cells response to Vascular endothelial growth factor C | |sample_experimental_condition=Lymphatic Endothelial cells response to Vascular endothelial growth factor C | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.21936925443806e-220!GO:0005737;cytoplasm;1.27367562923612e-191!GO:0043231;intracellular membrane-bound organelle;1.02435835768725e-171!GO:0043227;membrane-bound organelle;1.4639948525621e-171!GO:0043226;organelle;1.0204124919496e-170!GO:0043229;intracellular organelle;2.90180689445212e-170!GO:0044444;cytoplasmic part;6.23927726591541e-143!GO:0044422;organelle part;4.69943437206764e-135!GO:0044446;intracellular organelle part;1.58757457550201e-133!GO:0032991;macromolecular complex;2.47778043929613e-96!GO:0030529;ribonucleoprotein complex;2.23945100279095e-84!GO:0044237;cellular metabolic process;1.25365817284095e-79!GO:0005515;protein binding;3.41907126467401e-79!GO:0044238;primary metabolic process;1.55897164212797e-78!GO:0005739;mitochondrion;5.82205947791688e-78!GO:0043170;macromolecule metabolic process;2.68167908316079e-68!GO:0043233;organelle lumen;8.93543132886965e-68!GO:0031974;membrane-enclosed lumen;8.93543132886965e-68!GO:0003723;RNA binding;5.32850336316468e-63!GO:0044428;nuclear part;3.98105624583066e-61!GO:0005634;nucleus;3.14785585026603e-57!GO:0005840;ribosome;1.20026792765549e-55!GO:0006412;translation;1.37402032076148e-51!GO:0044429;mitochondrial part;2.77728382333948e-51!GO:0019538;protein metabolic process;7.10214459121927e-51!GO:0031090;organelle membrane;1.11790727349569e-50!GO:0043234;protein complex;4.71870512883246e-49!GO:0003735;structural constituent of ribosome;4.79056960999414e-49!GO:0044260;cellular macromolecule metabolic process;1.89741288230636e-45!GO:0044267;cellular protein metabolic process;2.19654128896302e-45!GO:0031967;organelle envelope;1.76635145149677e-44!GO:0031975;envelope;4.4189182714787e-44!GO:0033279;ribosomal subunit;2.1891505748335e-43!GO:0009058;biosynthetic process;5.94108022157989e-42!GO:0005829;cytosol;1.76427966087362e-41!GO:0044249;cellular biosynthetic process;1.95020112924301e-41!GO:0016043;cellular component organization and biogenesis;2.87016336087222e-41!GO:0006396;RNA processing;5.9201662220036e-40!GO:0009059;macromolecule biosynthetic process;7.67494426883688e-38!GO:0031981;nuclear lumen;1.8559475907309e-37!GO:0015031;protein transport;1.99110533607701e-37!GO:0033036;macromolecule localization;3.21678398340918e-36!GO:0005740;mitochondrial envelope;1.7899366160564e-34!GO:0045184;establishment of protein localization;4.42674444101613e-34!GO:0008104;protein localization;1.03246243357665e-33!GO:0043283;biopolymer metabolic process;8.31636240975788e-33!GO:0031966;mitochondrial membrane;1.29391686188088e-32!GO:0005830;cytosolic ribosome (sensu Eukaryota);5.92891725572861e-32!GO:0016071;mRNA metabolic process;8.4635760064826e-32!GO:0019866;organelle inner membrane;4.26386496680998e-31!GO:0065003;macromolecular complex assembly;4.88275481422952e-31!GO:0046907;intracellular transport;1.16373788429694e-30!GO:0010467;gene expression;5.46525610611483e-30!GO:0006996;organelle organization and biogenesis;8.90184202853631e-30!GO:0008380;RNA splicing;1.45122111193394e-29!GO:0043228;non-membrane-bound organelle;1.62711828094847e-29!GO:0043232;intracellular non-membrane-bound organelle;1.62711828094847e-29!GO:0005743;mitochondrial inner membrane;8.953961422777e-29!GO:0006397;mRNA processing;2.71301287960218e-28!GO:0022613;ribonucleoprotein complex biogenesis and assembly;4.95055798637637e-28!GO:0022607;cellular component assembly;1.21225866559116e-27!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.23681325806352e-27!GO:0006886;intracellular protein transport;1.39084409015897e-25!GO:0044445;cytosolic part;4.13388683718236e-25!GO:0006119;oxidative phosphorylation;6.43365837430874e-24!GO:0005654;nucleoplasm;9.67120746857192e-23!GO:0005681;spliceosome;1.43961420863729e-22!GO:0044455;mitochondrial membrane part;1.61443863171647e-22!GO:0015935;small ribosomal subunit;1.61443863171647e-22!GO:0015934;large ribosomal subunit;5.42484063063878e-22!GO:0006259;DNA metabolic process;2.39028729798312e-21!GO:0031980;mitochondrial lumen;5.11041259851826e-21!GO:0005759;mitochondrial matrix;5.11041259851826e-21!GO:0000166;nucleotide binding;4.54692176243656e-20!GO:0051649;establishment of cellular localization;6.15626503446223e-20!GO:0051641;cellular localization;1.43206069528482e-19!GO:0044451;nucleoplasm part;1.97897035126653e-19!GO:0005783;endoplasmic reticulum;3.12174007531878e-19!GO:0016462;pyrophosphatase activity;6.85609072921211e-19!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;7.23048372226843e-19!GO:0016817;hydrolase activity, acting on acid anhydrides;9.73949354669554e-19!GO:0017111;nucleoside-triphosphatase activity;1.36259810802173e-18!GO:0006457;protein folding;1.45377626836777e-18!GO:0005746;mitochondrial respiratory chain;2.16871703920526e-18!GO:0051186;cofactor metabolic process;2.26339817273901e-18!GO:0007049;cell cycle;2.52636163807146e-18!GO:0012505;endomembrane system;5.04364832196628e-18!GO:0000502;proteasome complex (sensu Eukaryota);8.4292366202118e-18!GO:0008134;transcription factor binding;2.82982720922809e-17!GO:0022618;protein-RNA complex assembly;3.37993093260977e-17!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);6.01694146685276e-17!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.39892414003086e-16!GO:0012501;programmed cell death;2.39240350914091e-16!GO:0005730;nucleolus;2.50130566140386e-16!GO:0006915;apoptosis;3.13335447106201e-16!GO:0044265;cellular macromolecule catabolic process;4.39491245672793e-16!GO:0050136;NADH dehydrogenase (quinone) activity;4.92083064141825e-16!GO:0003954;NADH dehydrogenase activity;4.92083064141825e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.92083064141825e-16!GO:0016874;ligase activity;7.10519129728874e-16!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.21321626331436e-15!GO:0048770;pigment granule;1.43459406219319e-15!GO:0042470;melanosome;1.43459406219319e-15!GO:0043285;biopolymer catabolic process;1.94275415336092e-15!GO:0005761;mitochondrial ribosome;2.50302414759559e-15!GO:0000313;organellar ribosome;2.50302414759559e-15!GO:0044432;endoplasmic reticulum part;2.73056621706028e-15!GO:0044248;cellular catabolic process;3.63136159719606e-15!GO:0022402;cell cycle process;7.7932787386378e-15!GO:0009057;macromolecule catabolic process;7.86672902650362e-15!GO:0006512;ubiquitin cycle;8.10536494188314e-15!GO:0032553;ribonucleotide binding;8.11975157115503e-15!GO:0032555;purine ribonucleotide binding;8.11975157115503e-15!GO:0017076;purine nucleotide binding;8.95226000784058e-15!GO:0006605;protein targeting;2.19001622211166e-14!GO:0008219;cell death;2.70694574643555e-14!GO:0016265;death;2.70694574643555e-14!GO:0051603;proteolysis involved in cellular protein catabolic process;2.87404594470772e-14!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.99935506749342e-14!GO:0006732;coenzyme metabolic process;3.57794575535502e-14!GO:0042775;organelle ATP synthesis coupled electron transport;4.10682463337919e-14!GO:0042773;ATP synthesis coupled electron transport;4.10682463337919e-14!GO:0019941;modification-dependent protein catabolic process;4.1365260090803e-14!GO:0043632;modification-dependent macromolecule catabolic process;4.1365260090803e-14!GO:0030964;NADH dehydrogenase complex (quinone);4.40866056697514e-14!GO:0045271;respiratory chain complex I;4.40866056697514e-14!GO:0005747;mitochondrial respiratory chain complex I;4.40866056697514e-14!GO:0044257;cellular protein catabolic process;4.84421827404279e-14!GO:0008135;translation factor activity, nucleic acid binding;5.04941795560772e-14!GO:0006511;ubiquitin-dependent protein catabolic process;9.04667905057369e-14!GO:0051082;unfolded protein binding;1.04259060974489e-13!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.47083268636289e-13!GO:0030163;protein catabolic process;1.95222482204106e-13!GO:0003676;nucleic acid binding;2.28261699628706e-13!GO:0000278;mitotic cell cycle;2.73271574438623e-13!GO:0005794;Golgi apparatus;4.72672110112248e-13!GO:0016192;vesicle-mediated transport;3.16258744577976e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;3.24067397069274e-12!GO:0000375;RNA splicing, via transesterification reactions;3.24067397069274e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;3.24067397069274e-12!GO:0048193;Golgi vesicle transport;7.88606339140762e-12!GO:0043412;biopolymer modification;8.42793780902027e-12!GO:0042254;ribosome biogenesis and assembly;1.8126516492326e-11!GO:0003743;translation initiation factor activity;2.72955380720934e-11!GO:0009259;ribonucleotide metabolic process;2.73267671809753e-11!GO:0006974;response to DNA damage stimulus;3.54244382458408e-11!GO:0005694;chromosome;3.54244382458408e-11!GO:0005635;nuclear envelope;3.74194794704075e-11!GO:0006413;translational initiation;3.85424569205163e-11!GO:0003712;transcription cofactor activity;3.94668972628529e-11!GO:0006163;purine nucleotide metabolic process;5.69636935245465e-11!GO:0042981;regulation of apoptosis;6.11945469289774e-11!GO:0009055;electron carrier activity;6.83465576169258e-11!GO:0043067;regulation of programmed cell death;7.75973289905165e-11!GO:0044427;chromosomal part;9.31200740175455e-11!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.31200740175455e-11!GO:0009150;purine ribonucleotide metabolic process;9.65552275723817e-11!GO:0051726;regulation of cell cycle;1.06774301139812e-10!GO:0048523;negative regulation of cellular process;1.12600952686799e-10!GO:0006464;protein modification process;1.27596408731274e-10!GO:0000074;regulation of progression through cell cycle;1.76986998079171e-10!GO:0005789;endoplasmic reticulum membrane;1.88236367351057e-10!GO:0009056;catabolic process;1.93652361479192e-10!GO:0005524;ATP binding;1.96897818268413e-10!GO:0032559;adenyl ribonucleotide binding;2.0345846605891e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;2.2817646803069e-10!GO:0006164;purine nucleotide biosynthetic process;2.70375413066058e-10!GO:0030554;adenyl nucleotide binding;2.75619545457299e-10!GO:0009260;ribonucleotide biosynthetic process;3.46857003272078e-10!GO:0009152;purine ribonucleotide biosynthetic process;4.42298363140574e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;5.52497369688127e-10!GO:0065004;protein-DNA complex assembly;5.89164455009398e-10!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;6.25936580978975e-10!GO:0016070;RNA metabolic process;6.41658992124174e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;1.05524838766759e-09!GO:0008639;small protein conjugating enzyme activity;1.16642314521109e-09!GO:0016604;nuclear body;1.19297318169752e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.19692672358259e-09!GO:0043069;negative regulation of programmed cell death;1.21341032991619e-09!GO:0006916;anti-apoptosis;1.25582879411129e-09!GO:0006446;regulation of translational initiation;1.4323989386743e-09!GO:0043066;negative regulation of apoptosis;1.45615970840424e-09!GO:0031965;nuclear membrane;1.57861963580889e-09!GO:0042623;ATPase activity, coupled;1.68464837775952e-09!GO:0006913;nucleocytoplasmic transport;1.78519016780986e-09!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.00277778254956e-09!GO:0004842;ubiquitin-protein ligase activity;2.02537799927764e-09!GO:0051188;cofactor biosynthetic process;2.17448657233375e-09!GO:0009199;ribonucleoside triphosphate metabolic process;2.34822536007083e-09!GO:0051276;chromosome organization and biogenesis;2.84406356764519e-09!GO:0044453;nuclear membrane part;3.10473637279663e-09!GO:0009141;nucleoside triphosphate metabolic process;3.14777725294961e-09!GO:0007067;mitosis;3.41845218209092e-09!GO:0043687;post-translational protein modification;3.55373047362586e-09!GO:0000087;M phase of mitotic cell cycle;3.66471267085404e-09!GO:0009205;purine ribonucleoside triphosphate metabolic process;4.14346150605173e-09!GO:0009144;purine nucleoside triphosphate metabolic process;4.14346150605173e-09!GO:0015986;ATP synthesis coupled proton transport;4.38315622256686e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.38315622256686e-09!GO:0048519;negative regulation of biological process;4.38315622256686e-09!GO:0051169;nuclear transport;4.39513513134748e-09!GO:0003924;GTPase activity;4.7791639025987e-09!GO:0006325;establishment and/or maintenance of chromatin architecture;5.23429706255722e-09!GO:0006366;transcription from RNA polymerase II promoter;5.23429706255722e-09!GO:0005793;ER-Golgi intermediate compartment;5.36427694491652e-09!GO:0016887;ATPase activity;5.9150423148901e-09!GO:0019787;small conjugating protein ligase activity;6.87861266565314e-09!GO:0016491;oxidoreductase activity;7.13190074590315e-09!GO:0006260;DNA replication;8.02102276282824e-09!GO:0005773;vacuole;8.3732550010998e-09!GO:0006281;DNA repair;8.61872786247218e-09!GO:0006333;chromatin assembly or disassembly;9.36979605179327e-09!GO:0009142;nucleoside triphosphate biosynthetic process;1.14410251237325e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.14410251237325e-08!GO:0017038;protein import;1.35912074944004e-08!GO:0008565;protein transporter activity;1.41269264312893e-08!GO:0022403;cell cycle phase;1.43147994694949e-08!GO:0046034;ATP metabolic process;1.5484729701936e-08!GO:0000785;chromatin;1.55237835944303e-08!GO:0009060;aerobic respiration;1.60495798648673e-08!GO:0006323;DNA packaging;1.77069396550941e-08!GO:0009719;response to endogenous stimulus;1.8529285301526e-08!GO:0005839;proteasome core complex (sensu Eukaryota);1.89747156842032e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.02274977656617e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.02274977656617e-08!GO:0030532;small nuclear ribonucleoprotein complex;2.24641447704455e-08!GO:0006334;nucleosome assembly;2.5225335109058e-08!GO:0051301;cell division;2.80274973121437e-08!GO:0009117;nucleotide metabolic process;2.884111187395e-08!GO:0006399;tRNA metabolic process;3.36296495533076e-08!GO:0031497;chromatin assembly;3.54817583262486e-08!GO:0051246;regulation of protein metabolic process;4.56687137460322e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.3308451081622e-08!GO:0045333;cellular respiration;5.60250551027368e-08!GO:0019829;cation-transporting ATPase activity;5.70473903560272e-08!GO:0006754;ATP biosynthetic process;6.20881075703771e-08!GO:0006753;nucleoside phosphate metabolic process;6.20881075703771e-08!GO:0006461;protein complex assembly;6.46061101776452e-08!GO:0005768;endosome;7.30784875871161e-08!GO:0015078;hydrogen ion transmembrane transporter activity;7.65204744307672e-08!GO:0050794;regulation of cellular process;7.73426169805103e-08!GO:0000323;lytic vacuole;1.24205292656129e-07!GO:0005764;lysosome;1.24205292656129e-07!GO:0006364;rRNA processing;1.78581004252484e-07!GO:0005525;GTP binding;1.83675351768258e-07!GO:0016881;acid-amino acid ligase activity;1.83710020391507e-07!GO:0004298;threonine endopeptidase activity;1.84583876723434e-07!GO:0009108;coenzyme biosynthetic process;2.01729003561204e-07!GO:0016072;rRNA metabolic process;2.80787372842512e-07!GO:0007005;mitochondrion organization and biogenesis;2.81072568737282e-07!GO:0005788;endoplasmic reticulum lumen;2.92697105127869e-07!GO:0016607;nuclear speck;4.87781491256266e-07!GO:0031988;membrane-bound vesicle;4.9099484094848e-07!GO:0016023;cytoplasmic membrane-bound vesicle;4.98422532735611e-07!GO:0006099;tricarboxylic acid cycle;5.04256211680171e-07!GO:0046356;acetyl-CoA catabolic process;5.04256211680171e-07!GO:0004386;helicase activity;5.74689850587806e-07!GO:0065002;intracellular protein transport across a membrane;5.74689850587806e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.05334932348691e-07!GO:0006950;response to stress;6.3638962115619e-07!GO:0048522;positive regulation of cellular process;6.70241254819652e-07!GO:0016787;hydrolase activity;8.20446471990855e-07!GO:0008026;ATP-dependent helicase activity;8.35086750902403e-07!GO:0016469;proton-transporting two-sector ATPase complex;1.03471626056038e-06!GO:0006084;acetyl-CoA metabolic process;1.09790480716254e-06!GO:0005643;nuclear pore;1.09917416795767e-06!GO:0007243;protein kinase cascade;1.15840541175226e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.24190624908628e-06!GO:0045259;proton-transporting ATP synthase complex;1.25202945189848e-06!GO:0003697;single-stranded DNA binding;1.44011358493283e-06!GO:0051187;cofactor catabolic process;1.48111476153387e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.48111476153387e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.48111476153387e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.48111476153387e-06!GO:0006752;group transfer coenzyme metabolic process;1.95106896381009e-06!GO:0015630;microtubule cytoskeleton;2.12620214453909e-06!GO:0006793;phosphorus metabolic process;2.46041501638414e-06!GO:0006796;phosphate metabolic process;2.46041501638414e-06!GO:0016779;nucleotidyltransferase activity;2.47126033784328e-06!GO:0000279;M phase;2.47126033784328e-06!GO:0043038;amino acid activation;2.68607794709196e-06!GO:0006418;tRNA aminoacylation for protein translation;2.68607794709196e-06!GO:0043039;tRNA aminoacylation;2.68607794709196e-06!GO:0032561;guanyl ribonucleotide binding;2.89547634318742e-06!GO:0019001;guanyl nucleotide binding;2.89547634318742e-06!GO:0005770;late endosome;2.9632666873685e-06!GO:0045454;cell redox homeostasis;3.90658478455274e-06!GO:0005667;transcription factor complex;5.82231438725644e-06!GO:0045786;negative regulation of progression through cell cycle;6.02013220138174e-06!GO:0016310;phosphorylation;6.23261408607521e-06!GO:0046930;pore complex;6.76296785994095e-06!GO:0009109;coenzyme catabolic process;6.86886949967387e-06!GO:0032446;protein modification by small protein conjugation;6.99036881183995e-06!GO:0031982;vesicle;6.99084780771001e-06!GO:0000245;spliceosome assembly;8.37532456035961e-06!GO:0030120;vesicle coat;8.77125616675964e-06!GO:0030662;coated vesicle membrane;8.77125616675964e-06!GO:0031410;cytoplasmic vesicle;8.96858236632431e-06!GO:0006091;generation of precursor metabolites and energy;9.14786989923148e-06!GO:0016567;protein ubiquitination;1.05114868621222e-05!GO:0005762;mitochondrial large ribosomal subunit;1.05971059753006e-05!GO:0000315;organellar large ribosomal subunit;1.05971059753006e-05!GO:0051170;nuclear import;1.07483049123796e-05!GO:0003713;transcription coactivator activity;1.15741575805401e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;1.25043452305074e-05!GO:0000786;nucleosome;1.27107550162238e-05!GO:0003714;transcription corepressor activity;1.48364209549065e-05!GO:0019843;rRNA binding;1.71254049961007e-05!GO:0050657;nucleic acid transport;1.89808500235592e-05!GO:0051236;establishment of RNA localization;1.89808500235592e-05!GO:0050658;RNA transport;1.89808500235592e-05!GO:0031968;organelle outer membrane;1.90156017243591e-05!GO:0016740;transferase activity;2.02945478408483e-05!GO:0006403;RNA localization;2.1246749358071e-05!GO:0019867;outer membrane;2.23841130134803e-05!GO:0043566;structure-specific DNA binding;2.25007548489402e-05!GO:0044440;endosomal part;2.33409106971076e-05!GO:0010008;endosome membrane;2.33409106971076e-05!GO:0003724;RNA helicase activity;2.42832465620802e-05!GO:0006606;protein import into nucleus;2.87610534626773e-05!GO:0048475;coated membrane;3.49607819238958e-05!GO:0030117;membrane coat;3.49607819238958e-05!GO:0016564;transcription repressor activity;3.76904427069455e-05!GO:0005741;mitochondrial outer membrane;4.62566398279195e-05!GO:0044431;Golgi apparatus part;4.89351076306321e-05!GO:0051087;chaperone binding;4.91516188865629e-05!GO:0005769;early endosome;5.02740324484246e-05!GO:0050789;regulation of biological process;5.33377874920741e-05!GO:0000314;organellar small ribosomal subunit;5.34949435786032e-05!GO:0005763;mitochondrial small ribosomal subunit;5.34949435786032e-05!GO:0016853;isomerase activity;5.47753117793447e-05!GO:0031252;leading edge;5.84768557700198e-05!GO:0009967;positive regulation of signal transduction;6.28572018048587e-05!GO:0009165;nucleotide biosynthetic process;6.6135726461504e-05!GO:0006613;cotranslational protein targeting to membrane;6.91429536444666e-05!GO:0000151;ubiquitin ligase complex;7.1152231162345e-05!GO:0030867;rough endoplasmic reticulum membrane;0.000100768094032973!GO:0031324;negative regulation of cellular metabolic process;0.00011613983379262!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000125978987480764!GO:0051329;interphase of mitotic cell cycle;0.000128946921483502!GO:0008654;phospholipid biosynthetic process;0.000133024074531557!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000137873236614966!GO:0016563;transcription activator activity;0.000139482487085495!GO:0051427;hormone receptor binding;0.000139482487085495!GO:0043623;cellular protein complex assembly;0.000141779700832294!GO:0016044;membrane organization and biogenesis;0.00014888065803545!GO:0030036;actin cytoskeleton organization and biogenesis;0.000153547530648138!GO:0019899;enzyme binding;0.000166807983419981!GO:0033116;ER-Golgi intermediate compartment membrane;0.000178055565881484!GO:0065009;regulation of a molecular function;0.000179010139352337!GO:0007010;cytoskeleton organization and biogenesis;0.000195168789189546!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000202307009144763!GO:0005813;centrosome;0.000207926870928865!GO:0005798;Golgi-associated vesicle;0.000219977122605277!GO:0048518;positive regulation of biological process;0.000223889506625462!GO:0051325;interphase;0.000227570772813515!GO:0003899;DNA-directed RNA polymerase activity;0.000233386928409752!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000237341964921661!GO:0005819;spindle;0.000262398346661604!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000272668908363317!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000274348111721161!GO:0008186;RNA-dependent ATPase activity;0.00027764410897932!GO:0043681;protein import into mitochondrion;0.000289972410793417!GO:0035257;nuclear hormone receptor binding;0.000289972410793417!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000294433228599742!GO:0006414;translational elongation;0.000298676460776932!GO:0051028;mRNA transport;0.000393357700130374!GO:0043021;ribonucleoprotein binding;0.00040284781696972!GO:0042802;identical protein binding;0.000405615703051896!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000434785223805778!GO:0015399;primary active transmembrane transporter activity;0.000434785223805778!GO:0005815;microtubule organizing center;0.00049244729171891!GO:0051789;response to protein stimulus;0.000511460000273598!GO:0006986;response to unfolded protein;0.000511460000273598!GO:0016859;cis-trans isomerase activity;0.000519346324565992!GO:0005885;Arp2/3 protein complex;0.000540107960237254!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000557439127739455!GO:0048471;perinuclear region of cytoplasm;0.000562077918985295!GO:0000139;Golgi membrane;0.000582601875589268!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000594560667278319!GO:0008361;regulation of cell size;0.000595214355714628!GO:0009892;negative regulation of metabolic process;0.000627739233508174!GO:0016049;cell growth;0.000656673691159428!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.000663310324369007!GO:0008250;oligosaccharyl transferase complex;0.000673236616345127!GO:0005048;signal sequence binding;0.000684983482717676!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000720836414782566!GO:0004004;ATP-dependent RNA helicase activity;0.000771973108151793!GO:0030029;actin filament-based process;0.000774052023928382!GO:0016126;sterol biosynthetic process;0.000791559205303967!GO:0005774;vacuolar membrane;0.00080298403058662!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00080298403058662!GO:0001558;regulation of cell growth;0.00080298403058662!GO:0008632;apoptotic program;0.000805900503778232!GO:0016568;chromatin modification;0.000890266792249011!GO:0015992;proton transport;0.000920232214030771!GO:0051920;peroxiredoxin activity;0.000923810738842216!GO:0031072;heat shock protein binding;0.000933500945548018!GO:0007264;small GTPase mediated signal transduction;0.000970302531055272!GO:0015980;energy derivation by oxidation of organic compounds;0.00107678091810417!GO:0006626;protein targeting to mitochondrion;0.00109909159343228!GO:0006818;hydrogen transport;0.00122150146015247!GO:0004576;oligosaccharyl transferase activity;0.00122428203051447!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00122428203051447!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00122428203051447!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00122428203051447!GO:0007006;mitochondrial membrane organization and biogenesis;0.00122914256477955!GO:0044262;cellular carbohydrate metabolic process;0.00129335683632627!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00131970643041525!GO:0030133;transport vesicle;0.00139711933693095!GO:0006612;protein targeting to membrane;0.00142119845089739!GO:0030880;RNA polymerase complex;0.00145520482380545!GO:0006261;DNA-dependent DNA replication;0.00147936510580533!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00149906693388225!GO:0048487;beta-tubulin binding;0.00156436001202568!GO:0006979;response to oxidative stress;0.00168099588585676!GO:0046483;heterocycle metabolic process;0.00185905054223204!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00203127866396482!GO:0022890;inorganic cation transmembrane transporter activity;0.00219726820163183!GO:0044437;vacuolar part;0.00222094736191245!GO:0007040;lysosome organization and biogenesis;0.00223708322561197!GO:0018196;peptidyl-asparagine modification;0.00229712845008521!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00229712845008521!GO:0043488;regulation of mRNA stability;0.00235140965101245!GO:0043487;regulation of RNA stability;0.00235140965101245!GO:0005765;lysosomal membrane;0.00242961625981805!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00258732368355951!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00258732368355951!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00258732368355951!GO:0015002;heme-copper terminal oxidase activity;0.00258732368355951!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00258732368355951!GO:0004129;cytochrome-c oxidase activity;0.00258732368355951!GO:0048468;cell development;0.00265183687839958!GO:0043065;positive regulation of apoptosis;0.00274082945458836!GO:0005637;nuclear inner membrane;0.00275402669681305!GO:0051168;nuclear export;0.0028330547633198!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00283795521400621!GO:0008610;lipid biosynthetic process;0.00291770275963156!GO:0005905;coated pit;0.00294291663741292!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00295763340876301!GO:0005657;replication fork;0.00297005296287407!GO:0003729;mRNA binding;0.00297209442241559!GO:0051101;regulation of DNA binding;0.00301092613572291!GO:0031902;late endosome membrane;0.00301251986899748!GO:0043068;positive regulation of programmed cell death;0.00318368275513874!GO:0008047;enzyme activator activity;0.00332896634312768!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.00333831939637195!GO:0000428;DNA-directed RNA polymerase complex;0.00333831939637195!GO:0008283;cell proliferation;0.00334169394657203!GO:0006509;membrane protein ectodomain proteolysis;0.00334169394657203!GO:0033619;membrane protein proteolysis;0.00334169394657203!GO:0006383;transcription from RNA polymerase III promoter;0.00343319643940956!GO:0008383;manganese superoxide dismutase activity;0.00350980425401201!GO:0001315;age-dependent response to reactive oxygen species;0.00350980425401201!GO:0065007;biological regulation;0.00357220371675066!GO:0040008;regulation of growth;0.00375053593445994!GO:0005874;microtubule;0.00395128688184408!GO:0005791;rough endoplasmic reticulum;0.00395128688184408!GO:0007051;spindle organization and biogenesis;0.00395128688184408!GO:0006839;mitochondrial transport;0.00405949549416694!GO:0006352;transcription initiation;0.00410564697590962!GO:0005684;U2-dependent spliceosome;0.00412672640148899!GO:0006891;intra-Golgi vesicle-mediated transport;0.00419930909780301!GO:0008033;tRNA processing;0.00419930909780301!GO:0046474;glycerophospholipid biosynthetic process;0.00425597515014492!GO:0030027;lamellipodium;0.00451512202012747!GO:0008139;nuclear localization sequence binding;0.00456691010137649!GO:0015036;disulfide oxidoreductase activity;0.00459649534544641!GO:0006778;porphyrin metabolic process;0.00469762926064284!GO:0033013;tetrapyrrole metabolic process;0.00469762926064284!GO:0015631;tubulin binding;0.00488769365739979!GO:0030663;COPI coated vesicle membrane;0.00494520347959444!GO:0030126;COPI vesicle coat;0.00494520347959444!GO:0006740;NADPH regeneration;0.00498872987639764!GO:0006098;pentose-phosphate shunt;0.00498872987639764!GO:0051252;regulation of RNA metabolic process;0.00500670031795083!GO:0016481;negative regulation of transcription;0.00507022813464456!GO:0008092;cytoskeletal protein binding;0.00521766631405742!GO:0006695;cholesterol biosynthetic process;0.00521766631405742!GO:0006401;RNA catabolic process;0.00521766631405742!GO:0043492;ATPase activity, coupled to movement of substances;0.00528177298296092!GO:0006402;mRNA catabolic process;0.00535291690425564!GO:0046467;membrane lipid biosynthetic process;0.00553307659761817!GO:0007033;vacuole organization and biogenesis;0.00553955566477068!GO:0003684;damaged DNA binding;0.00592930395598427!GO:0050790;regulation of catalytic activity;0.00613701215281227!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00622100788213071!GO:0046489;phosphoinositide biosynthetic process;0.00632780195547251!GO:0005869;dynactin complex;0.00651368198659953!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00662023898366287!GO:0051059;NF-kappaB binding;0.00662128246828401!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00690951187672084!GO:0006082;organic acid metabolic process;0.00701275039165689!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00734194849267795!GO:0007162;negative regulation of cell adhesion;0.00736754189570739!GO:0019752;carboxylic acid metabolic process;0.00736754189570739!GO:0048500;signal recognition particle;0.00744391646032566!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0075525874631339!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00805756067451983!GO:0048660;regulation of smooth muscle cell proliferation;0.00806511575158946!GO:0033673;negative regulation of kinase activity;0.00817880849948511!GO:0006469;negative regulation of protein kinase activity;0.00817880849948511!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00830916167855298!GO:0006118;electron transport;0.00831364796829243!GO:0030521;androgen receptor signaling pathway;0.0083295876953854!GO:0007050;cell cycle arrest;0.00844639466859594!GO:0051348;negative regulation of transferase activity;0.00872468538863643!GO:0030137;COPI-coated vesicle;0.00917157192257172!GO:0050662;coenzyme binding;0.00920816331524752!GO:0008637;apoptotic mitochondrial changes;0.00924167518886715!GO:0017166;vinculin binding;0.00924167518886715!GO:0000082;G1/S transition of mitotic cell cycle;0.00948530342386109!GO:0051540;metal cluster binding;0.0095729035272522!GO:0051536;iron-sulfur cluster binding;0.0095729035272522!GO:0044452;nucleolar part;0.00962539959556149!GO:0030041;actin filament polymerization;0.00970936886764375!GO:0008180;signalosome;0.0097961558069455!GO:0030659;cytoplasmic vesicle membrane;0.010042790809663!GO:0022407;regulation of cell-cell adhesion;0.0101675317382982!GO:0007034;vacuolar transport;0.0101954806226676!GO:0000775;chromosome, pericentric region;0.0108492700523222!GO:0045926;negative regulation of growth;0.0110295560700785!GO:0000059;protein import into nucleus, docking;0.0111340209968393!GO:0030658;transport vesicle membrane;0.0112840853533744!GO:0007242;intracellular signaling cascade;0.0116393524237607!GO:0022408;negative regulation of cell-cell adhesion;0.0117357371072875!GO:0007088;regulation of mitosis;0.0118483880253122!GO:0043433;negative regulation of transcription factor activity;0.0119723249388232!GO:0030134;ER to Golgi transport vesicle;0.0121333458954759!GO:0042168;heme metabolic process;0.0121567092366046!GO:0043284;biopolymer biosynthetic process;0.0124223320722695!GO:0006650;glycerophospholipid metabolic process;0.0126130148644325!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0129295247695336!GO:0016272;prefoldin complex;0.0130264033809458!GO:0003746;translation elongation factor activity;0.0138507214523922!GO:0032508;DNA duplex unwinding;0.0138507214523922!GO:0032392;DNA geometric change;0.0138507214523922!GO:0007265;Ras protein signal transduction;0.0139065063551571!GO:0046822;regulation of nucleocytoplasmic transport;0.0141362259990401!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0142551325184822!GO:0006595;polyamine metabolic process;0.0144360288650483!GO:0045941;positive regulation of transcription;0.0145385917639939!GO:0000075;cell cycle checkpoint;0.0148973720766484!GO:0008312;7S RNA binding;0.0149711459593872!GO:0006897;endocytosis;0.0153789399094763!GO:0010324;membrane invagination;0.0153789399094763!GO:0005832;chaperonin-containing T-complex;0.0156557629647076!GO:0008094;DNA-dependent ATPase activity;0.015868802296122!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0158919774515996!GO:0045047;protein targeting to ER;0.0158919774515996!GO:0051287;NAD binding;0.0160607268402832!GO:0051098;regulation of binding;0.0161187955255485!GO:0006917;induction of apoptosis;0.0161818832509543!GO:0003711;transcription elongation regulator activity;0.0162936436841418!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0163235324460515!GO:0003690;double-stranded DNA binding;0.0170062462284795!GO:0043022;ribosome binding;0.0170379173729192!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0170379173729192!GO:0001953;negative regulation of cell-matrix adhesion;0.0171800133962769!GO:0001726;ruffle;0.0172491020353868!GO:0050811;GABA receptor binding;0.0179740000148314!GO:0004197;cysteine-type endopeptidase activity;0.018115998391341!GO:0016197;endosome transport;0.0181408483039674!GO:0046426;negative regulation of JAK-STAT cascade;0.0183107504907322!GO:0045792;negative regulation of cell size;0.0188311939560934!GO:0006417;regulation of translation;0.0188311939560934!GO:0030127;COPII vesicle coat;0.0188311939560934!GO:0012507;ER to Golgi transport vesicle membrane;0.0188311939560934!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0189239979052584!GO:0007041;lysosomal transport;0.0189440434687169!GO:0030176;integral to endoplasmic reticulum membrane;0.0194038958515411!GO:0030308;negative regulation of cell growth;0.0194038958515411!GO:0045045;secretory pathway;0.0199058251906223!GO:0006779;porphyrin biosynthetic process;0.0201814399107742!GO:0033014;tetrapyrrole biosynthetic process;0.0201814399107742!GO:0006268;DNA unwinding during replication;0.0201965272544577!GO:0008154;actin polymerization and/or depolymerization;0.0202842633863142!GO:0044433;cytoplasmic vesicle part;0.0202953205950384!GO:0012502;induction of programmed cell death;0.0206153909702551!GO:0006611;protein export from nucleus;0.0208530445608221!GO:0009966;regulation of signal transduction;0.0209053787758788!GO:0006749;glutathione metabolic process;0.0210676728483229!GO:0030132;clathrin coat of coated pit;0.0213361979454217!GO:0006643;membrane lipid metabolic process;0.0214540552885575!GO:0035258;steroid hormone receptor binding;0.0217735066653701!GO:0030518;steroid hormone receptor signaling pathway;0.0217735066653701!GO:0016251;general RNA polymerase II transcription factor activity;0.0223840525250946!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0224800014554143!GO:0010257;NADH dehydrogenase complex assembly;0.0224800014554143!GO:0033108;mitochondrial respiratory chain complex assembly;0.0224800014554143!GO:0030833;regulation of actin filament polymerization;0.0227268452210159!GO:0006516;glycoprotein catabolic process;0.0227340821796866!GO:0001944;vasculature development;0.0227340821796866!GO:0043086;negative regulation of catalytic activity;0.0227911545616677!GO:0048659;smooth muscle cell proliferation;0.0232788606047813!GO:0008320;protein transmembrane transporter activity;0.0233572034772165!GO:0008538;proteasome activator activity;0.0233603558980874!GO:0046966;thyroid hormone receptor binding;0.0235052186867276!GO:0001836;release of cytochrome c from mitochondria;0.023852784898412!GO:0012506;vesicle membrane;0.023852784898412!GO:0006220;pyrimidine nucleotide metabolic process;0.0240576090496211!GO:0000049;tRNA binding;0.0240655976121726!GO:0003756;protein disulfide isomerase activity;0.0247729907019925!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0247729907019925!GO:0030660;Golgi-associated vesicle membrane;0.0249907765968047!GO:0004177;aminopeptidase activity;0.0252187466407862!GO:0006497;protein amino acid lipidation;0.0254233465729014!GO:0043281;regulation of caspase activity;0.025544887702175!GO:0007346;regulation of progression through mitotic cell cycle;0.0259690996150906!GO:0032507;maintenance of cellular protein localization;0.026300093393833!GO:0006302;double-strand break repair;0.0268198106953968!GO:0008234;cysteine-type peptidase activity;0.027441337443077!GO:0046519;sphingoid metabolic process;0.0280068289826723!GO:0006672;ceramide metabolic process;0.0281176675954547!GO:0016363;nuclear matrix;0.0286417657674582!GO:0006007;glucose catabolic process;0.0286573267205116!GO:0035035;histone acetyltransferase binding;0.0288013341796005!GO:0042532;negative regulation of tyrosine phosphorylation of STAT protein;0.0291331725491984!GO:0042518;negative regulation of tyrosine phosphorylation of Stat3 protein;0.0291331725491984!GO:0050732;negative regulation of peptidyl-tyrosine phosphorylation;0.0291331725491984!GO:0009303;rRNA transcription;0.0299812344845749!GO:0030100;regulation of endocytosis;0.0300302566072014!GO:0045893;positive regulation of transcription, DNA-dependent;0.0300302566072014!GO:0007021;tubulin folding;0.0302458003631515!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0305021451963362!GO:0009116;nucleoside metabolic process;0.0306948065024889!GO:0000776;kinetochore;0.0311281888459753!GO:0006289;nucleotide-excision repair;0.0311447056829363!GO:0051539;4 iron, 4 sulfur cluster binding;0.0311473804115013!GO:0022884;macromolecule transmembrane transporter activity;0.031271749240455!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.031271749240455!GO:0030032;lamellipodium biogenesis;0.0312803280716615!GO:0005876;spindle microtubule;0.0312925614424193!GO:0031901;early endosome membrane;0.0317539760936954!GO:0019222;regulation of metabolic process;0.0319124035151382!GO:0004527;exonuclease activity;0.0319263589565996!GO:0004860;protein kinase inhibitor activity;0.0336044830552608!GO:0031529;ruffle organization and biogenesis;0.0337325965375759!GO:0040011;locomotion;0.0338757019262092!GO:0030503;regulation of cell redox homeostasis;0.0341814182989194!GO:0006739;NADP metabolic process;0.0342030289890783!GO:0005092;GDP-dissociation inhibitor activity;0.0352416084017429!GO:0044438;microbody part;0.0352416084017429!GO:0044439;peroxisomal part;0.0352416084017429!GO:0006733;oxidoreduction coenzyme metabolic process;0.0352626020816391!GO:0016860;intramolecular oxidoreductase activity;0.0364361438095077!GO:0045185;maintenance of protein localization;0.0370740444577742!GO:0006506;GPI anchor biosynthetic process;0.0370740444577742!GO:0005096;GTPase activator activity;0.0370740444577742!GO:0000096;sulfur amino acid metabolic process;0.0381924246883449!GO:0005784;translocon complex;0.0383252656401853!GO:0033559;unsaturated fatty acid metabolic process;0.0389396531546577!GO:0006636;unsaturated fatty acid biosynthetic process;0.0389396531546577!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0390016533122633!GO:0031124;mRNA 3'-end processing;0.039086918960237!GO:0051270;regulation of cell motility;0.0392165742482339!GO:0006520;amino acid metabolic process;0.0395136027306513!GO:0001872;zymosan binding;0.0395136027306513!GO:0001878;response to yeast;0.0395136027306513!GO:0000339;RNA cap binding;0.039636526757167!GO:0030118;clathrin coat;0.0400214647750568!GO:0004532;exoribonuclease activity;0.041469286768611!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.041469286768611!GO:0006405;RNA export from nucleus;0.041664651655453!GO:0001568;blood vessel development;0.041664651655453!GO:0051128;regulation of cellular component organization and biogenesis;0.0417957128221735!GO:0004518;nuclease activity;0.0418630124109209!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0436123871679974!GO:0042987;amyloid precursor protein catabolic process;0.0436123871679974!GO:0006144;purine base metabolic process;0.043951486250124!GO:0009124;nucleoside monophosphate biosynthetic process;0.0442199576018323!GO:0009123;nucleoside monophosphate metabolic process;0.0442199576018323!GO:0019206;nucleoside kinase activity;0.0447983227209047!GO:0047485;protein N-terminus binding;0.045241798140358!GO:0031903;microbody membrane;0.045241798140358!GO:0005778;peroxisomal membrane;0.045241798140358!GO:0005130;granulocyte colony-stimulating factor receptor binding;0.045241798140358!GO:0006644;phospholipid metabolic process;0.0457771530021959!GO:0051651;maintenance of cellular localization;0.0468018674206772!GO:0006892;post-Golgi vesicle-mediated transport;0.0468018674206772!GO:0040012;regulation of locomotion;0.0468667381633723!GO:0051052;regulation of DNA metabolic process;0.0470691216654835!GO:0042158;lipoprotein biosynthetic process;0.047093148874429!GO:0006376;mRNA splice site selection;0.0478870186182834!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0478870186182834!GO:0001952;regulation of cell-matrix adhesion;0.0482305725278799!GO:0006505;GPI anchor metabolic process;0.048783781458297!GO:0006807;nitrogen compound metabolic process;0.048783781458297!GO:0030508;thiol-disulfide exchange intermediate activity;0.0490305214815601!GO:0031625;ubiquitin protein ligase binding;0.0493057426663008!GO:0051272;positive regulation of cell motility;0.0495484958469005!GO:0040017;positive regulation of locomotion;0.0495484958469005 | |||
|sample_id=12382 | |sample_id=12382 | ||
|sample_note= | |sample_note= | ||
| Line 75: | Line 105: | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=lymph node | |sample_tissue=lymph node | ||
|time= 00hr00min | |||
|timecourse=Lymphatic_EC_response_to_VEGFC | |||
|top_motifs=FOXL1:1.64799622753;SOX{8,9,10}:1.59526264365;PITX1..3:1.17731146699;PAX1,9:1.16746921325;RXR{A,B,G}:1.15239969467;STAT2,4,6:1.12341572334;TBP:1.09066711092;NFATC1..3:1.07556165216;IKZF1:1.00238482446;IKZF2:0.955695065776;HES1:0.925452981432;PAX4:0.918488170167;bHLH_family:0.905696617598;TLX1..3_NFIC{dimer}:0.865015263502;HAND1,2:0.834453386925;ALX4:0.800307190995;SOX5:0.799983393203;GFI1B:0.791890458417;ARID5B:0.717018976479;FOXQ1:0.704234772455;ALX1:0.67088557419;UFEwm:0.652449254143;TP53:0.636050282973;NFKB1_REL_RELA:0.592674647451;POU3F1..4:0.51728833984;HOX{A6,A7,B6,B7}:0.507072835176;GZF1:0.462051020527;PAX8:0.43002666872;ELF1,2,4:0.418355337988;CDC5L:0.40376417907;TAL1_TCF{3,4,12}:0.376062456599;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.359646549072;ZNF423:0.357560242082;ETS1,2:0.357113900635;IRF1,2:0.334661315057;POU2F1..3:0.328437299046;NFE2L1:0.318266871444;EVI1:0.309149224173;TEAD1:0.307809924178;PAX6:0.306854594755;FOXD3:0.301045253884;HMGA1,2:0.264765772756;SOX17:0.245901100477;POU6F1:0.238325926523;REST:0.230020268933;SPIB:0.205873844855;XCPE1{core}:0.185004950856;HBP1_HMGB_SSRP1_UBTF:0.181283082256;ZIC1..3:0.180897236429;GATA6:0.162198500408;HNF4A_NR2F1,2:0.148473248064;ADNP_IRX_SIX_ZHX:0.142340798172;LHX3,4:0.0998948839136;MYOD1:0.0860241902876;SOX2:0.0850677225683;STAT5{A,B}:0.0728483435252;GATA4:0.0658590165996;NFE2:0.0490072032406;SRF:0.0350807934728;DBP:0.0204699616484;FOX{F1,F2,J1}:0.0204526195469;ATF2:0.0159325435866;MEF2{A,B,C,D}:0.0152251534086;GCM1,2:0.0117386556013;NANOG:0.0115092755985;NR6A1:0.00365798969539;NKX2-3_NKX2-5:-0.00303783320039;FOXP1:-0.0119837521555;TFAP4:-0.0174529125954;TOPORS:-0.018916067845;E2F1..5:-0.0220496288211;EBF1:-0.0242411171921;ZBTB16:-0.0259014033606;NANOG{mouse}:-0.0259396373748;ZNF238:-0.0292247184264;LEF1_TCF7_TCF7L1,2:-0.0313336403467;MYB:-0.0323021628453;AR:-0.0405510743534;FOX{I1,J2}:-0.0541396641497;HIC1:-0.0626186426655;ZBTB6:-0.0627357916525;NR5A1,2:-0.063824268038;POU1F1:-0.0698469987563;HNF1A:-0.0815217658053;FOS_FOS{B,L1}_JUN{B,D}:-0.0834811890638;SREBF1,2:-0.0837737837324;AIRE:-0.0905124495238;CEBPA,B_DDIT3:-0.117755777934;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.139860485106;ONECUT1,2:-0.158086635849;SPI1:-0.159880136535;FOSL2:-0.196831655997;BACH2:-0.21501648587;HIF1A:-0.217406762676;YY1:-0.225696403222;GFI1:-0.231312762964;CDX1,2,4:-0.241237025072;NKX2-1,4:-0.252379310346;OCT4_SOX2{dimer}:-0.25950994756;NR3C1:-0.277740747895;NKX2-2,8:-0.282693253517;NFY{A,B,C}:-0.289869186018;SP1:-0.298847477733;HOX{A5,B5}:-0.300043592578;GTF2A1,2:-0.301418980452;DMAP1_NCOR{1,2}_SMARC:-0.313431788916;NKX6-1,2:-0.31757383566;CUX2:-0.331909003921;MTE{core}:-0.350361174402;PAX2:-0.350930978066;EN1,2:-0.36959433746;IRF7:-0.381016150368;RORA:-0.390826117116;LMO2:-0.39165740678;ATF6:-0.394130891908;TEF:-0.395495285118;NKX3-1:-0.423734530143;PRDM1:-0.424080311436;T:-0.43033754409;FOXA2:-0.431283095882;XBP1:-0.436425396001;FOX{D1,D2}:-0.43816242584;BPTF:-0.446547350336;PBX1:-0.447844575614;JUN:-0.450697139797;ATF4:-0.459747695597;RXRA_VDR{dimer}:-0.46061229912;HSF1,2:-0.461537175354;ATF5_CREB3:-0.462989899934;TFAP2B:-0.464022337949;VSX1,2:-0.465119794771;MED-1{core}:-0.471809121462;RREB1:-0.474388036732;MTF1:-0.489519384109;SMAD1..7,9:-0.511653345226;HLF:-0.540444835951;TFAP2{A,C}:-0.541873872178;ESR1:-0.557326312447;ZFP161:-0.563312563023;CREB1:-0.56535108444;MYBL2:-0.580992393173;ZNF384:-0.581809667763;ZNF143:-0.594010610462;NFIL3:-0.600114946453;GTF2I:-0.603364464051;HMX1:-0.618349500119;ZEB1:-0.618947612566;RUNX1..3:-0.620126984527;HOX{A4,D4}:-0.624379367532;MAZ:-0.631585378174;ZNF148:-0.634193599677;NFE2L2:-0.639519967012;NHLH1,2:-0.649810970709;SNAI1..3:-0.650929873906;TGIF1:-0.657904240981;TFCP2:-0.674381172983;RFX1:-0.692786924871;FOXM1:-0.696633308326;TLX2:-0.707256802297;HOXA9_MEIS1:-0.747063092041;TFDP1:-0.747189873107;NKX3-2:-0.756687082496;PAX3,7:-0.760777446997;KLF4:-0.790925995512;PPARG:-0.797185155436;ESRRA:-0.837995648952;NRF1:-0.854651932712;FOXO1,3,4:-0.856256780277;EGR1..3:-0.856412148608;NR1H4:-0.870244139875;RFX2..5_RFXANK_RFXAP:-0.873936997907;PATZ1:-0.875800031638;SPZ1:-0.875888855026;FOXN1:-0.878472516583;CRX:-0.893868660594;FOXP3:-0.894831522355;GLI1..3:-0.90957777622;BREu{core}:-0.929772226243;STAT1,3:-0.932882524976;AHR_ARNT_ARNT2:-0.944753441134;PAX5:-0.945662636676;ELK1,4_GABP{A,B1}:-0.946602680343;RBPJ:-0.95399990519;MYFfamily:-0.994245299632;PRRX1,2:-1.01057789279;PDX1:-1.03781130126;POU5F1:-1.15027711886;EP300:-1.16889865028;MZF1:-1.23091905365;MAFB:-1.26107955203;TBX4,5:-1.2887016233;NFIX:-1.44501765976 | |top_motifs=FOXL1:1.64799622753;SOX{8,9,10}:1.59526264365;PITX1..3:1.17731146699;PAX1,9:1.16746921325;RXR{A,B,G}:1.15239969467;STAT2,4,6:1.12341572334;TBP:1.09066711092;NFATC1..3:1.07556165216;IKZF1:1.00238482446;IKZF2:0.955695065776;HES1:0.925452981432;PAX4:0.918488170167;bHLH_family:0.905696617598;TLX1..3_NFIC{dimer}:0.865015263502;HAND1,2:0.834453386925;ALX4:0.800307190995;SOX5:0.799983393203;GFI1B:0.791890458417;ARID5B:0.717018976479;FOXQ1:0.704234772455;ALX1:0.67088557419;UFEwm:0.652449254143;TP53:0.636050282973;NFKB1_REL_RELA:0.592674647451;POU3F1..4:0.51728833984;HOX{A6,A7,B6,B7}:0.507072835176;GZF1:0.462051020527;PAX8:0.43002666872;ELF1,2,4:0.418355337988;CDC5L:0.40376417907;TAL1_TCF{3,4,12}:0.376062456599;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:0.359646549072;ZNF423:0.357560242082;ETS1,2:0.357113900635;IRF1,2:0.334661315057;POU2F1..3:0.328437299046;NFE2L1:0.318266871444;EVI1:0.309149224173;TEAD1:0.307809924178;PAX6:0.306854594755;FOXD3:0.301045253884;HMGA1,2:0.264765772756;SOX17:0.245901100477;POU6F1:0.238325926523;REST:0.230020268933;SPIB:0.205873844855;XCPE1{core}:0.185004950856;HBP1_HMGB_SSRP1_UBTF:0.181283082256;ZIC1..3:0.180897236429;GATA6:0.162198500408;HNF4A_NR2F1,2:0.148473248064;ADNP_IRX_SIX_ZHX:0.142340798172;LHX3,4:0.0998948839136;MYOD1:0.0860241902876;SOX2:0.0850677225683;STAT5{A,B}:0.0728483435252;GATA4:0.0658590165996;NFE2:0.0490072032406;SRF:0.0350807934728;DBP:0.0204699616484;FOX{F1,F2,J1}:0.0204526195469;ATF2:0.0159325435866;MEF2{A,B,C,D}:0.0152251534086;GCM1,2:0.0117386556013;NANOG:0.0115092755985;NR6A1:0.00365798969539;NKX2-3_NKX2-5:-0.00303783320039;FOXP1:-0.0119837521555;TFAP4:-0.0174529125954;TOPORS:-0.018916067845;E2F1..5:-0.0220496288211;EBF1:-0.0242411171921;ZBTB16:-0.0259014033606;NANOG{mouse}:-0.0259396373748;ZNF238:-0.0292247184264;LEF1_TCF7_TCF7L1,2:-0.0313336403467;MYB:-0.0323021628453;AR:-0.0405510743534;FOX{I1,J2}:-0.0541396641497;HIC1:-0.0626186426655;ZBTB6:-0.0627357916525;NR5A1,2:-0.063824268038;POU1F1:-0.0698469987563;HNF1A:-0.0815217658053;FOS_FOS{B,L1}_JUN{B,D}:-0.0834811890638;SREBF1,2:-0.0837737837324;AIRE:-0.0905124495238;CEBPA,B_DDIT3:-0.117755777934;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.139860485106;ONECUT1,2:-0.158086635849;SPI1:-0.159880136535;FOSL2:-0.196831655997;BACH2:-0.21501648587;HIF1A:-0.217406762676;YY1:-0.225696403222;GFI1:-0.231312762964;CDX1,2,4:-0.241237025072;NKX2-1,4:-0.252379310346;OCT4_SOX2{dimer}:-0.25950994756;NR3C1:-0.277740747895;NKX2-2,8:-0.282693253517;NFY{A,B,C}:-0.289869186018;SP1:-0.298847477733;HOX{A5,B5}:-0.300043592578;GTF2A1,2:-0.301418980452;DMAP1_NCOR{1,2}_SMARC:-0.313431788916;NKX6-1,2:-0.31757383566;CUX2:-0.331909003921;MTE{core}:-0.350361174402;PAX2:-0.350930978066;EN1,2:-0.36959433746;IRF7:-0.381016150368;RORA:-0.390826117116;LMO2:-0.39165740678;ATF6:-0.394130891908;TEF:-0.395495285118;NKX3-1:-0.423734530143;PRDM1:-0.424080311436;T:-0.43033754409;FOXA2:-0.431283095882;XBP1:-0.436425396001;FOX{D1,D2}:-0.43816242584;BPTF:-0.446547350336;PBX1:-0.447844575614;JUN:-0.450697139797;ATF4:-0.459747695597;RXRA_VDR{dimer}:-0.46061229912;HSF1,2:-0.461537175354;ATF5_CREB3:-0.462989899934;TFAP2B:-0.464022337949;VSX1,2:-0.465119794771;MED-1{core}:-0.471809121462;RREB1:-0.474388036732;MTF1:-0.489519384109;SMAD1..7,9:-0.511653345226;HLF:-0.540444835951;TFAP2{A,C}:-0.541873872178;ESR1:-0.557326312447;ZFP161:-0.563312563023;CREB1:-0.56535108444;MYBL2:-0.580992393173;ZNF384:-0.581809667763;ZNF143:-0.594010610462;NFIL3:-0.600114946453;GTF2I:-0.603364464051;HMX1:-0.618349500119;ZEB1:-0.618947612566;RUNX1..3:-0.620126984527;HOX{A4,D4}:-0.624379367532;MAZ:-0.631585378174;ZNF148:-0.634193599677;NFE2L2:-0.639519967012;NHLH1,2:-0.649810970709;SNAI1..3:-0.650929873906;TGIF1:-0.657904240981;TFCP2:-0.674381172983;RFX1:-0.692786924871;FOXM1:-0.696633308326;TLX2:-0.707256802297;HOXA9_MEIS1:-0.747063092041;TFDP1:-0.747189873107;NKX3-2:-0.756687082496;PAX3,7:-0.760777446997;KLF4:-0.790925995512;PPARG:-0.797185155436;ESRRA:-0.837995648952;NRF1:-0.854651932712;FOXO1,3,4:-0.856256780277;EGR1..3:-0.856412148608;NR1H4:-0.870244139875;RFX2..5_RFXANK_RFXAP:-0.873936997907;PATZ1:-0.875800031638;SPZ1:-0.875888855026;FOXN1:-0.878472516583;CRX:-0.893868660594;FOXP3:-0.894831522355;GLI1..3:-0.90957777622;BREu{core}:-0.929772226243;STAT1,3:-0.932882524976;AHR_ARNT_ARNT2:-0.944753441134;PAX5:-0.945662636676;ELK1,4_GABP{A,B1}:-0.946602680343;RBPJ:-0.95399990519;MYFfamily:-0.994245299632;PRRX1,2:-1.01057789279;PDX1:-1.03781130126;POU5F1:-1.15027711886;EP300:-1.16889865028;MZF1:-1.23091905365;MAFB:-1.26107955203;TBX4,5:-1.2887016233;NFIX:-1.44501765976 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12382-131E6;search_select_hide=table117:FF:12382-131E6 | |||
}} | }} | ||
Latest revision as of 18:38, 4 June 2020
| Name: | Lymphatic Endothelial cells response to VEGFC |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13157 |
| Sample type: | time courses |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13157
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13157
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.0611 |
| 10 | 10 | 0.284 |
| 100 | 100 | 0.0437 |
| 101 | 101 | 0.51 |
| 102 | 102 | 0.771 |
| 103 | 103 | 0.576 |
| 104 | 104 | 0.658 |
| 105 | 105 | 0.81 |
| 106 | 106 | 0.00616 |
| 107 | 107 | 0.0243 |
| 108 | 108 | 0.0493 |
| 109 | 109 | 0.0655 |
| 11 | 11 | 0.0438 |
| 110 | 110 | 0.0223 |
| 111 | 111 | 0.055 |
| 112 | 112 | 0.649 |
| 113 | 113 | 0.781 |
| 114 | 114 | 0.0749 |
| 115 | 115 | 0.662 |
| 116 | 116 | 0.406 |
| 117 | 117 | 0.181 |
| 118 | 118 | 0.577 |
| 119 | 119 | 0.0176 |
| 12 | 12 | 0.874 |
| 120 | 120 | 0.285 |
| 121 | 121 | 0.697 |
| 122 | 122 | 0.308 |
| 123 | 123 | 0.047 |
| 124 | 124 | 0.0325 |
| 125 | 125 | 0.065 |
| 126 | 126 | 0.914 |
| 127 | 127 | 0.451 |
| 128 | 128 | 0.208 |
| 129 | 129 | 0.741 |
| 13 | 13 | 0.00599 |
| 130 | 130 | 0.296 |
| 131 | 131 | 0.706 |
| 132 | 132 | 0.385 |
| 133 | 133 | 0.461 |
| 134 | 134 | 0.693 |
| 135 | 135 | 0.196 |
| 136 | 136 | 0.363 |
| 137 | 137 | 0.498 |
| 138 | 138 | 0.648 |
| 139 | 139 | 0.186 |
| 14 | 14 | 0.617 |
| 140 | 140 | 0.575 |
| 141 | 141 | 0.224 |
| 142 | 142 | 0.701 |
| 143 | 143 | 0.0637 |
| 144 | 144 | 0.537 |
| 145 | 145 | 0.0355 |
| 146 | 146 | 0.467 |
| 147 | 147 | 0.141 |
| 148 | 148 | 0.406 |
| 149 | 149 | 0.357 |
| 15 | 15 | 0.418 |
| 150 | 150 | 0.166 |
| 151 | 151 | 0.567 |
| 152 | 152 | 0.0455 |
| 153 | 153 | 0.778 |
| 154 | 154 | 0.58 |
| 155 | 155 | 0.951 |
| 156 | 156 | 0.231 |
| 157 | 157 | 0.153 |
| 158 | 158 | 0.4 |
| 159 | 159 | 0.183 |
| 16 | 16 | 0.244 |
| 160 | 160 | 0.00508 |
| 161 | 161 | 0.913 |
| 162 | 162 | 0.429 |
| 163 | 163 | 0.904 |
| 164 | 164 | 0.176 |
| 165 | 165 | 0.577 |
| 166 | 166 | 0.882 |
| 167 | 167 | 0.134 |
| 168 | 168 | 0.293 |
| 169 | 169 | 0.0178 |
| 17 | 17 | 0.0512 |
| 18 | 18 | 0.541 |
| 19 | 19 | 0.109 |
| 2 | 2 | 0.852 |
| 20 | 20 | 0.337 |
| 21 | 21 | 0.441 |
| 22 | 22 | 0.487 |
| 23 | 23 | 0.481 |
| 24 | 24 | 0.962 |
| 25 | 25 | 0.51 |
| 26 | 26 | 0.0899 |
| 27 | 27 | 0.626 |
| 28 | 28 | 0.584 |
| 29 | 29 | 0.293 |
| 3 | 3 | 0.167 |
| 30 | 30 | 0.191 |
| 31 | 31 | 0.549 |
| 32 | 32 | 0.227 |
| 33 | 33 | 0.0538 |
| 34 | 34 | 0.851 |
| 35 | 35 | 0.136 |
| 36 | 36 | 0.00408 |
| 37 | 37 | 0.0394 |
| 38 | 38 | 0.208 |
| 39 | 39 | 0.365 |
| 4 | 4 | 0.615 |
| 40 | 40 | 0.00425 |
| 41 | 41 | 0.207 |
| 42 | 42 | 0.474 |
| 43 | 43 | 0.282 |
| 44 | 44 | 0.982 |
| 45 | 45 | 0.69 |
| 46 | 46 | 0.0624 |
| 47 | 47 | 0.138 |
| 48 | 48 | 0.101 |
| 49 | 49 | 0.317 |
| 5 | 5 | 0.535 |
| 50 | 50 | 0.585 |
| 51 | 51 | 0.498 |
| 52 | 52 | 0.818 |
| 53 | 53 | 0.755 |
| 54 | 54 | 0.608 |
| 55 | 55 | 0.934 |
| 56 | 56 | 0.445 |
| 57 | 57 | 0.0859 |
| 58 | 58 | 0.901 |
| 59 | 59 | 0.214 |
| 6 | 6 | 0.919 |
| 60 | 60 | 0.401 |
| 61 | 61 | 0.811 |
| 62 | 62 | 0.764 |
| 63 | 63 | 0.0936 |
| 64 | 64 | 0.342 |
| 65 | 65 | 0.17 |
| 66 | 66 | 0.911 |
| 67 | 67 | 0.131 |
| 68 | 68 | 0.211 |
| 69 | 69 | 0.526 |
| 7 | 7 | 0.738 |
| 70 | 70 | 0.104 |
| 71 | 71 | 0.0683 |
| 72 | 72 | 0.585 |
| 73 | 73 | 0.00938 |
| 74 | 74 | 0.173 |
| 75 | 75 | 0.153 |
| 76 | 76 | 0.39 |
| 77 | 77 | 0.409 |
| 78 | 78 | 0.0419 |
| 79 | 79 | 0.0469 |
| 8 | 8 | 0.00292 |
| 80 | 80 | 0.448 |
| 81 | 81 | 0.699 |
| 82 | 82 | 0.361 |
| 83 | 83 | 0.922 |
| 84 | 84 | 0.562 |
| 85 | 85 | 0.158 |
| 86 | 86 | 0.658 |
| 87 | 87 | 0.111 |
| 88 | 88 | 0.652 |
| 89 | 89 | 0.145 |
| 9 | 9 | 0.959 |
| 90 | 90 | 0.191 |
| 91 | 91 | 0.408 |
| 92 | 92 | 0.153 |
| 93 | 93 | 0.589 |
| 94 | 94 | 0.661 |
| 95 | 95 | 0.0583 |
| 96 | 96 | 0.453 |
| 97 | 97 | 0.518 |
| 98 | 98 | 0.305 |
| 99 | 99 | 0.0812 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13157
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000410 human Lymphatic Endothelial cells 0min after VEGFC treatment sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002139 (endothelial cell of vascular tree)
0000213 (lining cell)
0002078 (meso-epithelial cell)
0000215 (barrier cell)
0000255 (eukaryotic cell)
0000115 (endothelial cell)
0002138 (endothelial cell of lymphatic vessel)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000055 (vessel)
0004111 (anatomical conduit)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002049 (vasculature)
0007798 (vascular system)
0001473 (lymphatic vessel)
0002465 (lymphoid system)
0004535 (cardiovascular system)
0004536 (lymph vasculature)
0006558 (lymphatic part of lymphoid system)
0002193 (hemolymphoid system)
0002405 (immune system)
0001009 (circulatory system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000046 (human endothelial cell sample)
0000001 (sample)
0000350 (experimentally modified sample)
0000049 (human lymphatic endothelial cell sample)
0000341 (Vegfc treatment sample)
0000344 (0 minute sample)
0000410 (human Lymphatic Endothelial cells 0min after VEGFC treatment sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000222 (mesodermal cell)
CL:0005022 (vascular lymphangioblast)
