FFCP PHASE1:Mm9::chr7:144505876..144505884,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13593 | |EntrezGene=13593 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=618 | |||
|TSSclassifier=NA | |||
|UniProt=Q6NXL3 | |UniProt=Q6NXL3 | ||
|association_with_transcript=212bp_to_ENSMUST00000168203_5end | |association_with_transcript=212bp_to_ENSMUST00000168203_5end | ||
|cluster_id=chr7:144505876..144505884,- | |||
|description=CAGE_peak_9_at_Ebf3_5end | |description=CAGE_peak_9_at_Ebf3_5end | ||
|id=chr7:144505876..144505884,- | |id=chr7:144505876..144505884,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-34,23;CL:0000337,1.02e-34,23;CL:0000540,6.31e-24,33;CL:0000047,6.31e-24,33;CL:0000031,6.31e-24,33;CL:0000404,6.31e-24,33;CL:0002612,6.85e-22,3;CL:0000120,1.52e-21,3;CL:0000393,4.26e-20,39;CL:0000211,4.26e-20,39;CL:0002613,4.63e-20,3;CL:0002319,3.90e-18,43;CL:0000221,1.06e-17,44;CL:0000133,1.06e-17,44;CL:0002611,2.68e-14,2;CL:0002321,1.01e-10,70;CL:0000723,5.65e-08,91;CL:0000048,5.65e-08,91;CL:0000034,2.10e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002240!9.16e-08!6;UBERON:0005174!9.16e-08!6;UBERON:0001137!9.16e-08!6;UBERON:0001948!2.37e-07!5;UBERON:0002315!2.37e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,1.65e-34,5;UBERON:0002315,1.65e-34,5;UBERON:0002240,8.71e-29,6;UBERON:0005174,8.71e-29,6;UBERON:0001137,8.71e-29,6;UBERON:0002257,6.85e-22,3;UBERON:0003076,1.96e-14,12;UBERON:0003057,1.96e-14,12;UBERON:0002256,2.68e-14,2;UBERON:0000369,2.64e-12,5;UBERON:0002435,2.64e-12,5;UBERON:0000204,2.64e-12,5;UBERON:0010082,2.64e-12,5;UBERON:0002020,4.63e-12,34;UBERON:0001017,3.10e-10,73;UBERON:0001016,6.24e-10,75;UBERON:0000489,3.12e-08,21;UBERON:0002420,6.61e-08,8;UBERON:0007245,6.61e-08,8;UBERON:0010009,6.61e-08,8;UBERON:0010011,6.61e-08,8;UBERON:0000454,6.61e-08,8;UBERON:0001049,1.23e-07,52;UBERON:0005068,1.23e-07,52;UBERON:0006241,1.23e-07,52;UBERON:0007135,1.23e-07,52;UBERON:0004121,1.38e-07,95;UBERON:0000924,1.38e-07,95;UBERON:0006601,1.38e-07,95;UBERON:0000073,2.53e-07,54 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.84401275633236,3.1739458756322,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0,0,2.85650984403804,1.54607978666129,0,0,0,0,0,0.307213066512487,1.31886287730194,1.55528994124096,1.04182674111352,0,0,0,4.12480019663135,4.27115042397309,8.01517617048792,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0.30140963567143,0.476255494059295,0.2562274405697,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,2.39414924040619,0.853668028770671,0.243106717068294,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0.382576664137687,0.441182838239031,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,3.84401275633236,3.1739458756322,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0,0,2.85650984403804,1.54607978666129,0,0,0,0,0,0.307213066512487,1.31886287730194,1.55528994124096,1.04182674111352,0,0,0,4.12480019663135,4.27115042397309,8.01517617048792,0,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289198713839823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.305518091550949,0.124406970610093,0,0,0,0.459804208866946,0.540186389416048,0.30140963567143,0.476255494059295,0.2562274405697,0.0937017245597288,0.776110112217047,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0,0.308534225774757,0,0,0,0,0.164167464079095,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0.16488625294148,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,2.39414924040619,0.853668028770671,0.243106717068294,0.628839487883947,0.551530525350042,0,0,0.320919209591815,0.505394423527595,0.50695859978048,0.188626341386076,0.280924522409647,0.448176066834085,0.114870937911227,0.476293691283074,0.231768651889711,0.38581844092741,0.412085900803307,0,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,1.68342681497322,0.355905054372522,0.394017929502254,0.409231043169689,0.154936841185966,0.385813221962283,0.499621155875892,0,0.214871054048298,0.382576664137687,0.441182838239031,0 | ||
|short_description=p9@Ebf3 | |short_description=p9@Ebf3 | ||
}} | }} |
Latest revision as of 02:06, 26 September 2015
Short description: | p9@Ebf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Ebf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:618 |
Association with transcript: | 212bp_to_ENSMUST00000168203_5end |
EntrezGene: | Ebf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.02e-34 | 23 |
neuroblast (sensu Vertebrata) | 1.02e-34 | 23 |
neuron | 6.31e-24 | 33 |
neuronal stem cell | 6.31e-24 | 33 |
neuroblast | 6.31e-24 | 33 |
electrically signaling cell | 6.31e-24 | 33 |
neuron of the ventral spinal cord | 6.85e-22 | 3 |
granule cell | 1.52e-21 | 3 |
electrically responsive cell | 4.26e-20 | 39 |
electrically active cell | 4.26e-20 | 39 |
striatum neuron | 4.63e-20 | 3 |
neural cell | 3.90e-18 | 43 |
ectodermal cell | 1.06e-17 | 44 |
neurectodermal cell | 1.06e-17 | 44 |
neuron of the dorsal spinal cord | 2.68e-14 | 2 |
embryonic cell | 1.01e-10 | 70 |
somatic stem cell | 5.65e-08 | 91 |
multi fate stem cell | 5.65e-08 | 91 |
stem cell | 2.10e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
regional part of spinal cord | 1.65e-34 | 5 |
gray matter of spinal cord | 1.65e-34 | 5 |
spinal cord | 8.71e-29 | 6 |
dorsal region element | 8.71e-29 | 6 |
dorsum | 8.71e-29 | 6 |
ventral horn of spinal cord | 6.85e-22 | 3 |
posterior neural tube | 1.96e-14 | 12 |
chordal neural plate | 1.96e-14 | 12 |
dorsal horn of spinal cord | 2.68e-14 | 2 |
corpus striatum | 2.64e-12 | 5 |
striatum | 2.64e-12 | 5 |
ventral part of telencephalon | 2.64e-12 | 5 |
future corpus striatum | 2.64e-12 | 5 |
gray matter | 4.63e-12 | 34 |
central nervous system | 3.10e-10 | 73 |
nervous system | 6.24e-10 | 75 |
cavitated compound organ | 3.12e-08 | 21 |
basal ganglion | 6.61e-08 | 8 |
nuclear complex of neuraxis | 6.61e-08 | 8 |
aggregate regional part of brain | 6.61e-08 | 8 |
collection of basal ganglia | 6.61e-08 | 8 |
cerebral subcortex | 6.61e-08 | 8 |
neural tube | 1.23e-07 | 52 |
neural rod | 1.23e-07 | 52 |
future spinal cord | 1.23e-07 | 52 |
neural keel | 1.23e-07 | 52 |
ectoderm-derived structure | 1.38e-07 | 95 |
ectoderm | 1.38e-07 | 95 |
presumptive ectoderm | 1.38e-07 | 95 |
regional part of nervous system | 2.53e-07 | 54 |