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FFCP PHASE1:Mm9::chr8:108861897..108861909,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=58994
|EntrezGene=58994
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q9JJY3
|UniProt=Q9JJY3
|association_with_transcript=-9bp_to_NM_021491,uc009nfy.1,uc009nfz.1_5end
|association_with_transcript=-9bp_to_NM_021491,uc009nfy.1,uc009nfz.1_5end
|cluster_id=chr8:108861897..108861909,-
|description=CAGE_peak_4_at_Smpd3_5end
|description=CAGE_peak_4_at_Smpd3_5end
|id=chr8:108861897..108861909,-
|id=chr8:108861897..108861909,-
|ontology_enrichment_celltype=CL:0000117!4.02e-16!23;CL:0000337!4.02e-16!23;CL:0000540!5.00e-16!33;CL:0000047!5.00e-16!33;CL:0000031!5.00e-16!33;CL:0000404!5.00e-16!33;CL:0002319!5.70e-15!43;CL:0000221!9.37e-15!44;CL:0000133!9.37e-15!44;CL:0000393!2.09e-12!39;CL:0000211!2.09e-12!39;CL:0000055!1.68e-11!50
|ontology_enrichment_celltype=CL:0000117!4.02e-16!23;CL:0000337!4.02e-16!23;CL:0000540!5.00e-16!33;CL:0000047!5.00e-16!33;CL:0000031!5.00e-16!33;CL:0000404!5.00e-16!33;CL:0002319!5.70e-15!43;CL:0000221!9.37e-15!44;CL:0000133!9.37e-15!44;CL:0000393!2.09e-12!39;CL:0000211!2.09e-12!39;CL:0000055!1.68e-11!50
|ontology_enrichment_celltype_v019_2=CL:0000117,7.13e-28,23;CL:0000337,7.13e-28,23;CL:0000540,4.57e-20,33;CL:0000047,4.57e-20,33;CL:0000031,4.57e-20,33;CL:0000404,4.57e-20,33;CL:0002319,4.35e-16,43;CL:0000393,9.91e-16,39;CL:0000211,9.91e-16,39;CL:0000221,1.58e-15,44;CL:0000133,1.58e-15,44;CL:0002609,2.29e-09,6;CL:0002321,7.47e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.88e-33!73;UBERON:0005743!3.88e-33!73;UBERON:0000073!2.91e-31!75;UBERON:0001016!2.91e-31!75;UBERON:0004121!7.43e-30!102;UBERON:0000924!7.43e-30!102;UBERON:0006601!7.43e-30!102;UBERON:0002346!5.48e-29!71;UBERON:0003075!5.48e-29!71;UBERON:0007284!5.48e-29!71;UBERON:0001049!6.59e-27!52;UBERON:0005068!6.59e-27!52;UBERON:0006241!6.59e-27!52;UBERON:0007135!6.59e-27!52;UBERON:0000033!7.62e-26!63;UBERON:0000955!3.02e-25!50;UBERON:0006238!3.02e-25!50;UBERON:0002616!4.54e-25!49;UBERON:0003056!7.27e-25!49;UBERON:0002020!9.27e-23!34;UBERON:0003080!1.81e-22!40;UBERON:0002780!5.93e-22!39;UBERON:0001890!5.93e-22!39;UBERON:0006240!5.93e-22!39;UBERON:0002791!2.95e-19!29;UBERON:0003528!2.95e-19!29;UBERON:0001893!2.95e-19!29;UBERON:0000956!5.83e-14!21;UBERON:0001869!5.83e-14!21;UBERON:0000203!5.83e-14!21;UBERON:0007811!1.01e-12!86;UBERON:0002619!4.57e-11!17;UBERON:0000153!1.55e-09!94;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-39,54;UBERON:0002020,5.72e-37,34;UBERON:0001049,1.36e-35,52;UBERON:0005068,1.36e-35,52;UBERON:0006241,1.36e-35,52;UBERON:0007135,1.36e-35,52;UBERON:0002346,1.94e-35,64;UBERON:0003075,1.94e-35,64;UBERON:0007284,1.94e-35,64;UBERON:0001017,4.40e-35,73;UBERON:0001016,9.78e-34,75;UBERON:0003528,1.13e-30,29;UBERON:0002791,1.13e-30,29;UBERON:0001893,1.13e-30,29;UBERON:0003056,1.64e-30,49;UBERON:0002616,2.19e-30,46;UBERON:0003080,2.63e-30,40;UBERON:0000955,1.74e-29,47;UBERON:0006238,1.74e-29,47;UBERON:0004121,2.02e-29,95;UBERON:0000924,2.02e-29,95;UBERON:0006601,2.02e-29,95;UBERON:0002780,2.14e-29,39;UBERON:0001890,2.14e-29,39;UBERON:0006240,2.14e-29,39;UBERON:0010371,2.88e-29,73;UBERON:0000956,3.58e-21,21;UBERON:0001869,3.58e-21,21;UBERON:0000203,3.58e-21,21;UBERON:0010314,2.93e-20,92;UBERON:0002619,4.78e-16,17;UBERON:0002021,2.14e-12,10;UBERON:0000411,2.14e-12,10;UBERON:0001950,2.14e-12,10;UBERON:0002420,1.78e-10,8;UBERON:0007245,1.78e-10,8;UBERON:0010009,1.78e-10,8;UBERON:0010011,1.78e-10,8;UBERON:0000454,1.78e-10,8;UBERON:0000025,2.18e-09,114;UBERON:0000369,3.55e-08,5;UBERON:0002435,3.55e-08,5;UBERON:0000204,3.55e-08,5;UBERON:0010082,3.55e-08,5;UBERON:0004111,4.97e-08,122;UBERON:0001948,2.82e-07,5;UBERON:0002315,2.82e-07,5
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,0.219686182734472,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0,0.515672092277442,7.08107613008592,6.87688273053643,3.1691570175309,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,7.15458324928496,5.94026128659439,9.67494822216357,2.85650984403804,3.3130281142742,5.87955836231779,6.99671938433125,8.27296907949019,1.10115880999389,1.91531007127782,1.53606533256243,10.0233578674947,9.78917786545783,7.8137005583514,1.11673199600552,1.68828783009504,2.44477196442896,6.48182888042069,4.27115042397309,5.40558392893372,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0,0.247194967734374,0,0.884610551949874,0.161766849947409,0.662524555381181,0,0,2.34224637609238,2.30391377494801,0,0.11981512450592,0,0,1.49790639404823,3.66000482254901,8.92145900001337,4.17178368461463,4.60287823194595,2.70124457927428,3.56930778749067,0.203678727700633,0.248813941220186,0,0.210441855886474,0.520481771850815,0.459804208866946,1.0803727788321,0.753524089178575,1.56483948048054,1.0249097622788,1.87403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,4.20579897128254,7.9236551532049,0,0,0.213288250535234,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0,0,0.642202359951168,0.820481806145422,0.491804836130026,0,0.315508219416257,1.17131623288992,0.861693590931196,0.716906393857656,0.222798674082394,0.849229592366497,1.21443210502468,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0.488660878060728,0,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,2.38307724027652,0.36012218806262,0.388076051348264,0.428674070063185,0.532020700926821,1.07021290561242,1.15184314421485,0.913394847343798,0,0,0,0.16488625294148,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0.864090018773596,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,3.22227665555024,4.01026859407578,4.98374228796694,2.74033007908257,3.0215755895588,6.07520250208625,3.60256962579376,2.71885445390523,2.5888015587591,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,0.824140228955577,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,1.591905626988,1.40855335290712,0.976402972245426,0.952587382566147,1.39061191133827,0.38581844092741,0.824171801606613,1.17759136107518,1.02860775715625,1.4198064492747,1.43061713968393,1.45346416632329,1.31753132581463,1.4384483341585,0.914639864363863,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,1.47756723563345,1.22769312950907,0.619747364743864,0.771626443924566,1.99848462350357,0.935726433781634,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,0.219686182734472,0.972149495371417,0.419959264876088,1.43752564364972,0,0,0,0,0,0.515672092277442,7.08107613008592,6.87688273053643,3.1691570175309,0,0,0.449949858640699,0,0.7104801149461,0.599200221036809,0.768436610643109,7.15458324928496,5.94026128659439,9.67494822216357,2.85650984403804,3.3130281142742,5.87955836231779,6.99671938433125,8.27296907949019,1.10115880999389,1.91531007127782,1.53606533256243,10.0233578674947,9.78917786545783,7.8137005583514,1.11673199600552,1.68828783009504,2.44477196442896,6.48182888042069,4.27115042397309,5.40558392893372,0,0,0,0,0,0,0,0,0.280888840263504,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0.304465478312141,0.691846491768175,0.452167921657868,0.470354828542819,0,0.247194967734374,0,0.884610551949874,0.161766849947409,0.662524555381181,0,0,2.34224637609238,2.30391377494801,0,0.11981512450592,0,0,1.49790639404823,3.66000482254901,8.92145900001337,4.17178368461463,4.60287823194595,2.70124457927428,3.56930778749067,0.203678727700633,0.248813941220186,0,0.210441855886474,0.520481771850815,0.459804208866946,1.0803727788321,0.753524089178575,1.56483948048054,1.0249097622788,1.87403449119458,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0,0.393528463494808,0,0.232533944750408,0,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,4.20579897128254,7.9236551532049,0,0,0.213288250535234,0,0.257734922644187,0,0.22237804384487,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0,0,0,0,0,0,0,0.339490171550376,0,0.167506257441816,0,0,0,0,0.159454768657487,0,0,0.144649058581512,1.50791283939272,0,0,0,0.642202359951168,0.820481806145422,0.491804836130026,0,0.315508219416257,1.17131623288992,0.861693590931196,0.716906393857656,0.222798674082394,0.849229592366497,1.21443210502468,0.584511715822624,0.395287777946524,0.642642632843614,0,0.178065603667255,0.488660878060728,0,0,0,0.604647113929502,0.188605079755898,0.295301892880773,0.614870295887855,0.258428293168221,0.363533729477506,0.356497378384721,0.632073515871632,0,1.03135543248187,2.38307724027652,0.36012218806262,0.388076051348264,0.428674070063185,0.532020700926821,1.07021290561242,1.15184314421485,0.913394847343798,0,0,0,0.16488625294148,0.645857706783622,0.180938774784468,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0,0.134864346384821,0.330613822901344,0.26175594198403,0,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0.864090018773596,0.316011120628178,0,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0,0,0,0,0.453460767230423,0,0,0,0,0,0.183151624267265,0,0,3.95326289831947,3.22227665555024,4.01026859407578,4.98374228796694,2.74033007908257,3.0215755895588,6.07520250208625,3.60256962579376,2.71885445390523,2.5888015587591,0.207574695168353,0.798049746802062,0.512200817262403,0.486213434136588,1.25767897576789,0.735374033800057,1.55572709461131,0.824140228955577,0.64183841918363,1.01078884705519,1.2673964994512,1.13175804831646,1.591905626988,1.40855335290712,0.976402972245426,0.952587382566147,1.39061191133827,0.38581844092741,0.824171801606613,1.17759136107518,1.02860775715625,1.4198064492747,1.43061713968393,1.45346416632329,1.31753132581463,1.4384483341585,0.914639864363863,0.789209134313529,1.22223702461276,0.561142271657738,0.830445126869219,1.47756723563345,1.22769312950907,0.619747364743864,0.771626443924566,1.99848462350357,0.935726433781634,0.859484216193193,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p4@Smpd3
|short_description=p4@Smpd3
}}
}}

Latest revision as of 08:42, 27 September 2015

Short description:p4@Smpd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Smpd3_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -9bp_to_NM_021491, uc009nfy.1, uc009nfz.1_5end
EntrezGene:Smpd3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Smpd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C37.08
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.94
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F27.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D68.27
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.02
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.79
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.41
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.30
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.50
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F18.92
cortex, adult.CNhs10473.12-14D54.17
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F22.70
diencephalon, neonate N30.CNhs11201.1388-42B23.57
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G17.92
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.18
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.98
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.32e-3954
gray matter5.72e-3734
neural tube1.36e-3552
neural rod1.36e-3552
future spinal cord1.36e-3552
neural keel1.36e-3552
neurectoderm1.94e-3564
neural plate1.94e-3564
presumptive neural plate1.94e-3564
central nervous system4.40e-3573
nervous system9.78e-3475
brain grey matter1.13e-3029
regional part of telencephalon1.13e-3029
telencephalon1.13e-3029
pre-chordal neural plate1.64e-3049
regional part of brain2.19e-3046
anterior neural tube2.63e-3040
brain1.74e-2947
future brain1.74e-2947
ectoderm-derived structure2.02e-2995
ectoderm2.02e-2995
presumptive ectoderm2.02e-2995
regional part of forebrain2.14e-2939
forebrain2.14e-2939
future forebrain2.14e-2939
ecto-epithelium2.88e-2973
cerebral cortex3.58e-2121
cerebral hemisphere3.58e-2121
pallium3.58e-2121
structure with developmental contribution from neural crest2.93e-2092
regional part of cerebral cortex4.78e-1617
occipital lobe2.14e-1210
visual cortex2.14e-1210
neocortex2.14e-1210
basal ganglion1.78e-108
nuclear complex of neuraxis1.78e-108
aggregate regional part of brain1.78e-108
collection of basal ganglia1.78e-108
cerebral subcortex1.78e-108
tube2.18e-09114
corpus striatum3.55e-085
striatum3.55e-085
ventral part of telencephalon3.55e-085
future corpus striatum3.55e-085
anatomical conduit4.97e-08122
regional part of spinal cord2.82e-075
gray matter of spinal cord2.82e-075
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