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FFCP PHASE1:Mm9::chr8:87296432..87296489,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=3161
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr8:87296432..87296489,-
|description=CAGE_peak_at_chr8:87296432..87296489,-
|description=CAGE_peak_at_chr8:87296432..87296489,-
|id=chr8:87296432..87296489,-
|id=chr8:87296432..87296489,-
|ontology_enrichment_celltype=CL:0000117!7.56e-13!23;CL:0000337!7.56e-13!23;CL:0000221!8.03e-09!44;CL:0000133!8.03e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.71e-08!50
|ontology_enrichment_celltype=CL:0000117!7.56e-13!23;CL:0000337!7.56e-13!23;CL:0000221!8.03e-09!44;CL:0000133!8.03e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.71e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,2.66e-18,23;CL:0000337,2.66e-18,23;CL:0002319,1.55e-13,43;CL:0000221,5.26e-13,44;CL:0000133,5.26e-13,44;CL:0000540,2.02e-10,33;CL:0000047,2.02e-10,33;CL:0000031,2.02e-10,33;CL:0000404,2.02e-10,33;CL:0000393,9.63e-08,39;CL:0000211,9.63e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.25e-23!52;UBERON:0005068!1.25e-23!52;UBERON:0006241!1.25e-23!52;UBERON:0007135!1.25e-23!52;UBERON:0001017!1.40e-22!73;UBERON:0005743!1.40e-22!73;UBERON:0002020!2.93e-22!34;UBERON:0000955!3.98e-22!50;UBERON:0006238!3.98e-22!50;UBERON:0002616!1.59e-21!49;UBERON:0000073!4.00e-21!75;UBERON:0001016!4.00e-21!75;UBERON:0000033!6.16e-21!63;UBERON:0002791!1.91e-19!29;UBERON:0003528!1.91e-19!29;UBERON:0001893!1.91e-19!29;UBERON:0004121!1.02e-18!102;UBERON:0000924!1.02e-18!102;UBERON:0006601!1.02e-18!102;UBERON:0003080!1.77e-16!40;UBERON:0002780!5.80e-16!39;UBERON:0001890!5.80e-16!39;UBERON:0006240!5.80e-16!39;UBERON:0002346!6.62e-16!71;UBERON:0003075!6.62e-16!71;UBERON:0007284!6.62e-16!71;UBERON:0000956!2.03e-15!21;UBERON:0001869!2.03e-15!21;UBERON:0000203!2.03e-15!21;UBERON:0003056!2.32e-14!49;UBERON:0002619!1.27e-12!17;UBERON:0007811!6.14e-09!86;UBERON:0002021!1.02e-08!10;UBERON:0000411!1.02e-08!10;UBERON:0001950!1.02e-08!10;UBERON:0000153!1.93e-08!94;UBERON:0003076!7.17e-08!12;UBERON:0003057!7.17e-08!12;UBERON:0004111!1.36e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.49e-34,54;UBERON:0001017,1.75e-33,73;UBERON:0001049,4.98e-33,52;UBERON:0005068,4.98e-33,52;UBERON:0006241,4.98e-33,52;UBERON:0007135,4.98e-33,52;UBERON:0002020,2.65e-32,34;UBERON:0001016,4.62e-32,75;UBERON:0000955,1.53e-28,47;UBERON:0006238,1.53e-28,47;UBERON:0003528,4.09e-28,29;UBERON:0002791,4.09e-28,29;UBERON:0001893,4.09e-28,29;UBERON:0004121,8.99e-28,95;UBERON:0000924,8.99e-28,95;UBERON:0006601,8.99e-28,95;UBERON:0002616,1.14e-27,46;UBERON:0002346,3.76e-26,64;UBERON:0003075,3.76e-26,64;UBERON:0007284,3.76e-26,64;UBERON:0003080,1.44e-23,40;UBERON:0010371,6.77e-23,73;UBERON:0002780,8.39e-23,39;UBERON:0001890,8.39e-23,39;UBERON:0006240,8.39e-23,39;UBERON:0000956,4.02e-22,21;UBERON:0001869,4.02e-22,21;UBERON:0000203,4.02e-22,21;UBERON:0003056,3.00e-19,49;UBERON:0002619,5.71e-18,17;UBERON:0010314,3.32e-14,92;UBERON:0002021,3.53e-12,10;UBERON:0000411,3.53e-12,10;UBERON:0001950,3.53e-12,10;UBERON:0003076,1.03e-09,12;UBERON:0003057,1.03e-09,12;UBERON:0004111,8.98e-09,122;UBERON:0000025,1.63e-07,114;UBERON:0001954,2.91e-07,7;UBERON:0003022,2.91e-07,7;UBERON:0002421,2.91e-07,7;UBERON:0000349,2.91e-07,7;UBERON:0002600,2.91e-07,7;UBERON:0002420,3.84e-07,8;UBERON:0007245,3.84e-07,8;UBERON:0010009,3.84e-07,8;UBERON:0010011,3.84e-07,8;UBERON:0000454,3.84e-07,8
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0,0.782391344348039,5.66865406589161,14.4992880604751,10.304784650937,2.79972843250725,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.42779753031517,3.70293685490423,3.1691570175309,0,0,0,0,0,1.19840044207362,6.14749288514487,17.5235444801327,15.7956947848078,19.3498964443271,2.85650984403804,4.19650227808066,3.06226998037385,2.68367318851062,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,1.97829431595291,2.28719109006024,4.68822033501084,6.70039197603314,2.8138130501584,5.04234217663473,3.53554302568401,4.9830088279686,4.47358669980721,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.808834249737046,0.220841518460394,0,1.86391761218122,48.0160507098937,31.8358994356452,0,0,0,0,3.2953940669061,3.66000482254901,3.64397621127307,17.2086076990354,14.3200656104985,4.98691306942944,4.54275536589721,0.203678727700633,0,0,2.10441855886474,0,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0.696504333044333,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,16.1923260394378,38.2805158050938,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0.491764273019036,1.93155722413313,8.0275294993896,3.39913891117389,2.45902418065013,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,3.85585579706168,0.709700426041343,0.712262414669021,0.651547837414304,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,2.38307724027652,0,0,0,0,0,0.822745103010605,0.913394847343798,0,0,1.10264199027481,1.31909002353184,0,0.542816324353403,0.596861720015682,0.984845398470368,0,9.27126510052548,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0.216010681643603,1.04544148007234,0.218362563746178,0.539457385539283,0.41326727862668,1.30877970992015,0.90730481304255,4.97071450469541,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,3.62768613784338,0,0,0,0.386379188064381,0.563047426353546,2.01466786693992,2.78678892802786,1.00314420807073,27.1080884456192,21.6352861158373,22.9158205375759,20.2786755165551,21.2375581128899,17.3740596399631,21.6007200074178,23.4167025676595,19.0319811773366,25.3702552758392,0,0,0.341467211508268,0.729320151204882,0.628839487883947,1.47074806760011,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,1.52087579934144,1.50901073108861,1.77918864192777,2.11283002936069,2.01024141344646,0.476293691283074,1.97003354106254,1.92909220463705,2.88460130562315,1.76638704161277,2.74295401908332,1.59728225543404,0.953744759789284,1.45346416632329,1.50575008664529,1.26921911837515,1.64635175585495,1.31534855718921,2.30866993537965,1.68342681497322,1.06771516311757,0.985044823755635,0.818462086339379,2.32405261778949,0.771626443924566,5.74564329257276,1.87145286756327,3.22306581072447,0.382576664137687,0.882365676478062,1.15933917810211
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23164502574065,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0.288851619751275,0.166234645358492,0.612508068787107,0,0,0,0,0,0,0.377690453926732,0.811015449756117,0,0.782391344348039,5.66865406589161,14.4992880604751,10.304784650937,2.79972843250725,4.31257693094915,0,0,0,0.257259436035947,0.286533439938757,0.515672092277442,2.42779753031517,3.70293685490423,3.1691570175309,0,0,0,0,0,1.19840044207362,6.14749288514487,17.5235444801327,15.7956947848078,19.3498964443271,2.85650984403804,4.19650227808066,3.06226998037385,2.68367318851062,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,1.97829431595291,2.28719109006024,4.68822033501084,6.70039197603314,2.8138130501584,5.04234217663473,3.53554302568401,4.9830088279686,4.47358669980721,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,0.34255163915718,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0.289198713839823,0,0.808834249737046,0.220841518460394,0,1.86391761218122,48.0160507098937,31.8358994356452,0,0,0,0,3.2953940669061,3.66000482254901,3.64397621127307,17.2086076990354,14.3200656104985,4.98691306942944,4.54275536589721,0.203678727700633,0,0,2.10441855886474,0,0,0,0.452114453507145,0.272145996605311,0.2562274405697,0.0937017245597288,1.81092359517311,0,0.189106080167819,0.175951124163949,0,1.39023624612799,0.696504333044333,0.823128545631774,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0.16455984991348,0.164167464079095,0,0.146199987425332,0.219550115291051,0,16.1923260394378,38.2805158050938,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.754005626400808,0.198956472041151,0.19496408711912,0,0.216138049874694,0.597423819763102,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.315270288212382,0.44292937929755,0.159454768657487,0.327726629431476,0.518054945597687,0.723245292907558,0,0,0.491764273019036,1.93155722413313,8.0275294993896,3.39913891117389,2.45902418065013,0.252470927204373,0,0,0,0,0.222798674082394,0,0,0,0,3.85585579706168,0.709700426041343,0.712262414669021,0.651547837414304,2.96946221350564,0,0,0,0.188605079755898,0,0,0,0,0,0.632073515871632,0,0,2.38307724027652,0,0,0,0,0,0.822745103010605,0.913394847343798,0,0,1.10264199027481,1.31909002353184,0,0.542816324353403,0.596861720015682,0.984845398470368,0,9.27126510052548,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0.954670618015114,0.158167996790568,0,0.216010681643603,1.04544148007234,0.218362563746178,0.539457385539283,0.41326727862668,1.30877970992015,0.90730481304255,4.97071450469541,0,0,0,0,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194915761479505,0,0,3.62768613784338,0,0,0,0.386379188064381,0.563047426353546,2.01466786693992,2.78678892802786,1.00314420807073,27.1080884456192,21.6352861158373,22.9158205375759,20.2786755165551,21.2375581128899,17.3740596399631,21.6007200074178,23.4167025676595,19.0319811773366,25.3702552758392,0,0,0.341467211508268,0.729320151204882,0.628839487883947,1.47074806760011,2.44471400581777,2.06035057238894,1.92551525755089,1.51618327058278,1.52087579934144,1.50901073108861,1.77918864192777,2.11283002936069,2.01024141344646,0.476293691283074,1.97003354106254,1.92909220463705,2.88460130562315,1.76638704161277,2.74295401908332,1.59728225543404,0.953744759789284,1.45346416632329,1.50575008664529,1.26921911837515,1.64635175585495,1.31534855718921,2.30866993537965,1.68342681497322,1.06771516311757,0.985044823755635,0.818462086339379,2.32405261778949,0.771626443924566,5.74564329257276,1.87145286756327,3.22306581072447,0.382576664137687,0.882365676478062,1.15933917810211
|short_description=p@chr8:87296432..87296489,-
|short_description=p@chr8:87296432..87296489,-
}}
}}

Latest revision as of 06:07, 4 August 2015

Short description:p@chr8:87296432..87296489, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr8:87296432..87296489, -
Coexpression cluster:MCL_coexpression_mm9:3161
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p@chr8:87296432..87296489-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.67
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B814.50
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C310.30
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F515.80
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.58
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.70
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.04
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.98
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.47
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B248.02
cerebellum, neonate N30.CNhs11135.1395-42I231.84
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.30
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D517.21
cortex, neonate N30.CNhs11107.1392-42F214.32
diencephalon, adult.CNhs10482.20-12F24.99
diencephalon, neonate N30.CNhs11201.1388-42B24.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.39
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E816.19
hippocampus, neonate N00.CNhs11228.627-43G138.28
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C28.03
medulla oblongata, neonate N30.CNhs11200.1396-42A33.40
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.46
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G62.97
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C14.97
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B43.63
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.56
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A127.11
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A221.64
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.28
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A421.24
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A517.37
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A621.60
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A723.42
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.03
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.37
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.63
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.07
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I55.75
whole body, embryo E18.CNhs10516.493-3B31.87
whole body, neonate N00.CNhs10525.657-19C23.22
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)2.66e-1823
neuroblast (sensu Vertebrata)2.66e-1823
neural cell1.55e-1343
ectodermal cell5.26e-1344
neurectodermal cell5.26e-1344
neuron2.02e-1033
neuronal stem cell2.02e-1033
neuroblast2.02e-1033
electrically signaling cell2.02e-1033
electrically responsive cell9.63e-0839
electrically active cell9.63e-0839

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.49e-3454
central nervous system1.75e-3373
neural tube4.98e-3352
neural rod4.98e-3352
future spinal cord4.98e-3352
neural keel4.98e-3352
gray matter2.65e-3234
nervous system4.62e-3275
brain1.53e-2847
future brain1.53e-2847
brain grey matter4.09e-2829
regional part of telencephalon4.09e-2829
telencephalon4.09e-2829
ectoderm-derived structure8.99e-2895
ectoderm8.99e-2895
presumptive ectoderm8.99e-2895
regional part of brain1.14e-2746
neurectoderm3.76e-2664
neural plate3.76e-2664
presumptive neural plate3.76e-2664
anterior neural tube1.44e-2340
ecto-epithelium6.77e-2373
regional part of forebrain8.39e-2339
forebrain8.39e-2339
future forebrain8.39e-2339
cerebral cortex4.02e-2221
cerebral hemisphere4.02e-2221
pallium4.02e-2221
pre-chordal neural plate3.00e-1949
regional part of cerebral cortex5.71e-1817
structure with developmental contribution from neural crest3.32e-1492
occipital lobe3.53e-1210
visual cortex3.53e-1210
neocortex3.53e-1210
posterior neural tube1.03e-0912
chordal neural plate1.03e-0912
anatomical conduit8.98e-09122
tube1.63e-07114
Ammon's horn2.91e-077
lobe parts of cerebral cortex2.91e-077
hippocampal formation2.91e-077
limbic system2.91e-077
limbic lobe2.91e-077
basal ganglion3.84e-078
nuclear complex of neuraxis3.84e-078
aggregate regional part of brain3.84e-078
collection of basal ganglia3.84e-078
cerebral subcortex3.84e-078
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