FFCP PHASE1:Hg19::chr10:105615282..105615323,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9644 | |EntrezGene=9644 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |HGNC=23664 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCZ1 | |UniProt=Q5TCZ1 | ||
|association_with_transcript=0bp_to_ENST00000369774_5end | |association_with_transcript=0bp_to_ENST00000369774_5end | ||
|cluster_id=chr10:105615282..105615323,- | |||
|coexpression_cluster_id=C2976 | |||
|description=CAGE_peak_6_at_SH3PXD2A_5end | |description=CAGE_peak_6_at_SH3PXD2A_5end | ||
|id=chr10:105615282..105615323,- | |id=chr10:105615282..105615323,- | ||
|ontology_enrichment_celltype=CL:0002076!1.10e-08!43;CL:0000223!2.48e-07!59 | |ontology_enrichment_celltype=CL:0002076!1.10e-08!43;CL:0000223!2.48e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.55e-08,42;CL:0000223,1.59e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000924!2.22e-15!173;UBERON:0006601!2.22e-15!173;UBERON:0004121!1.96e-14!169;UBERON:0007023!4.76e-12!115;UBERON:0000153!1.18e-10!129;UBERON:0007811!1.18e-10!129;UBERON:0000033!1.32e-10!123;UBERON:0003102!3.42e-10!95;UBERON:0000467!5.27e-10!625;UBERON:0000475!8.62e-10!365;UBERON:0000468!8.99e-10!659;UBERON:0000480!9.23e-10!626;UBERON:0004119!1.39e-09!169;UBERON:0000925!1.39e-09!169;UBERON:0006595!1.39e-09!169;UBERON:0000064!1.53e-09!219;UBERON:0001049!4.82e-09!57;UBERON:0005068!4.82e-09!57;UBERON:0006241!4.82e-09!57;UBERON:0007135!4.82e-09!57;UBERON:0000062!1.99e-08!511;UBERON:0000922!2.90e-08!612;UBERON:0002050!8.92e-08!605;UBERON:0005423!8.92e-08!605;UBERON:0000481!8.96e-08!347;UBERON:0000161!1.26e-07!35;UBERON:0000923!1.58e-07!604;UBERON:0005291!1.58e-07!604;UBERON:0006598!1.58e-07!604;UBERON:0002532!1.58e-07!604;UBERON:0000165!1.90e-07!28;UBERON:0000930!1.90e-07!28;UBERON:0000166!2.64e-07!21;UBERON:0000483!3.06e-07!309;UBERON:0004111!4.17e-07!241;UBERON:0001004!4.77e-07!72;UBERON:0001017!5.65e-07!82;UBERON:0000073!6.23e-07!94;UBERON:0001016!6.23e-07!94;UBERON:0000119!7.26e-07!312;UBERON:0000955!9.37e-07!69;UBERON:0006238!9.37e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;7.68e-08;28!UBERON:0000161;8.77e-07;19!UBERON:0000166;8.77e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,9.70e-16,171;UBERON:0000924,9.70e-16,171;UBERON:0006601,9.70e-16,171;UBERON:0007023,3.61e-12,114;UBERON:0010371,9.80e-11,104;UBERON:0003102,1.19e-10,99;UBERON:0011216,2.78e-10,223;UBERON:0004119,5.43e-10,160;UBERON:0000925,5.43e-10,160;UBERON:0006595,5.43e-10,160;UBERON:0002050,1.22e-08,564;UBERON:0001049,1.33e-08,56;UBERON:0005068,1.33e-08,56;UBERON:0006241,1.33e-08,56;UBERON:0007135,1.33e-08,56;UBERON:0000073,1.24e-07,53;UBERON:0002616,1.24e-07,53;UBERON:0000923,1.78e-07,560;UBERON:0010316,1.78e-07,560;UBERON:0005291,1.78e-07,560;UBERON:0006598,1.78e-07,560;UBERON:0010317,1.78e-07,560;UBERON:0002532,1.78e-07,560;UBERON:0000165,2.08e-07,29;UBERON:0000930,2.08e-07,29;UBERON:0000166,2.52e-07,22;UBERON:0002346,4.96e-07,86;UBERON:0005423,5.72e-07,581;UBERON:0000161,7.67e-07,36;UBERON:0001004,7.82e-07,74;UBERON:0010314,9.22e-07,132 | |||
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| ||
|short_description=p6@SH3PXD2A | |short_description=p6@SH3PXD2A | ||
}} | }} |
Latest revision as of 04:21, 16 September 2015
Short description: | p6@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SH3PXD2A_5end |
Coexpression cluster: | C2976_Small_Gingival_Urothelial_keratoacanthoma_Keratinocyte_neuroectodermal_Bronchial |
Association with transcript: | 0bp_to_ENST00000369774_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | Q5TCZ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.55e-08 | 42 |
endodermal cell | 1.59e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 9.70e-16 | 171 |
ectoderm | 9.70e-16 | 171 |
presumptive ectoderm | 9.70e-16 | 171 |
adult organism | 3.61e-12 | 114 |
ecto-epithelium | 9.80e-11 | 104 |
surface structure | 1.19e-10 | 99 |
organ system subdivision | 2.78e-10 | 223 |
endoderm-derived structure | 5.43e-10 | 160 |
endoderm | 5.43e-10 | 160 |
presumptive endoderm | 5.43e-10 | 160 |
embryonic structure | 1.22e-08 | 564 |
neural tube | 1.33e-08 | 56 |
neural rod | 1.33e-08 | 56 |
future spinal cord | 1.33e-08 | 56 |
neural keel | 1.33e-08 | 56 |
regional part of nervous system | 1.24e-07 | 53 |
regional part of brain | 1.24e-07 | 53 |
germ layer | 1.78e-07 | 560 |
germ layer / neural crest | 1.78e-07 | 560 |
embryonic tissue | 1.78e-07 | 560 |
presumptive structure | 1.78e-07 | 560 |
germ layer / neural crest derived structure | 1.78e-07 | 560 |
epiblast (generic) | 1.78e-07 | 560 |
mouth | 2.08e-07 | 29 |
stomodeum | 2.08e-07 | 29 |
oral opening | 2.52e-07 | 22 |
neurectoderm | 4.96e-07 | 86 |
developing anatomical structure | 5.72e-07 | 581 |
orifice | 7.67e-07 | 36 |
respiratory system | 7.82e-07 | 74 |
structure with developmental contribution from neural crest | 9.22e-07 | 132 |