FFCP PHASE1:Hg19::chr13:67800290..67800302,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:67800290..67800302,- | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_at_chr13:67800290..67800302,- | |description=CAGE_peak_at_chr13:67800290..67800302,- | ||
|id=chr13:67800290..67800302,- | |id=chr13:67800290..67800302,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000515;6.08e-15;3!CL:0000056;1.91e-11;4!CL:0000680;6.57e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,3.59e-11,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.91e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.69e-46!57;UBERON:0005068!2.69e-46!57;UBERON:0006241!2.69e-46!57;UBERON:0007135!2.69e-46!57;UBERON:0002616!1.70e-37!59;UBERON:0002780!1.15e-36!41;UBERON:0001890!1.15e-36!41;UBERON:0006240!1.15e-36!41;UBERON:0003080!1.47e-35!42;UBERON:0002020!1.58e-34!34;UBERON:0003528!1.58e-34!34;UBERON:0001893!2.29e-34!34;UBERON:0003075!2.69e-33!86;UBERON:0007284!2.69e-33!86;UBERON:0002791!4.78e-33!33;UBERON:0002346!1.14e-32!90;UBERON:0000955!1.66e-31!69;UBERON:0006238!1.66e-31!69;UBERON:0001869!4.33e-31!32;UBERON:0001017!3.12e-29!82;UBERON:0005743!1.41e-28!86;UBERON:0007023!1.50e-26!115;UBERON:0000073!8.05e-26!94;UBERON:0001016!8.05e-26!94;UBERON:0003056!9.23e-26!61;UBERON:0002619!4.97e-22!22;UBERON:0000956!7.30e-21!25;UBERON:0000203!7.30e-21!25;UBERON:0001950!6.56e-19!20;UBERON:0000033!1.03e-17!123;UBERON:0000153!2.82e-16!129;UBERON:0007811!2.82e-16!129;UBERON:0002308!4.15e-16!9;UBERON:0000125!4.15e-16!9;UBERON:0000924!1.46e-13!173;UBERON:0006601!1.46e-13!173;UBERON:0004121!1.76e-13!169;UBERON:0009663!5.63e-13!7;UBERON:0002420!7.35e-13!9;UBERON:0007245!7.35e-13!9;UBERON:0010009!7.35e-13!9;UBERON:0010011!7.35e-13!9;UBERON:0000454!7.35e-13!9;UBERON:0000025!1.25e-11!194;UBERON:0003076!1.39e-11!15;UBERON:0003057!1.39e-11!15;UBERON:0000200!5.84e-11!6;UBERON:0002298!4.11e-10!8;UBERON:0004111!3.06e-09!241;UBERON:0000477!3.73e-09!286;UBERON:0000475!2.32e-08!365;UBERON:0001871!2.55e-08!7;UBERON:0000483!3.18e-08!309;UBERON:0000119!5.44e-08!312;UBERON:0004733!7.40e-08!12;UBERON:0002028!7.40e-08!12;UBERON:0007277!7.40e-08!12;UBERON:0000369!1.21e-07!4;UBERON:0002435!1.21e-07!4;UBERON:0000204!1.21e-07!4;UBERON:0010082!1.21e-07!4;UBERON:0000064!2.85e-07!219;UBERON:0004732!3.93e-07!13;UBERON:0002771!5.16e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.68e-33;34!UBERON:0002020;2.68e-33;34!UBERON:0002791;1.40e-30;32!UBERON:0002619;1.99e-28;22!UBERON:0001893;2.04e-28;34!UBERON:0001869;8.98e-27;32!UBERON:0000956;4.69e-25;25!UBERON:0000203;4.69e-25;25!UBERON:0002780;5.77e-25;41!UBERON:0001890;5.77e-25;41!UBERON:0001950;5.22e-24;20!UBERON:0002771;2.29e-22;2!UBERON:0001875;6.65e-22;2!UBERON:0006514;6.65e-22;2!UBERON:0000073;1.64e-19;53!UBERON:0002616;1.64e-19;53!UBERON:0002420;7.33e-19;9!UBERON:0000125;7.33e-19;9!UBERON:0007245;7.33e-19;9!UBERON:0002308;7.33e-19;9!UBERON:0010009;7.33e-19;9!UBERON:0010011;7.33e-19;9!UBERON:0000454;7.33e-19;9!UBERON:0000200;1.53e-16;6!UBERON:0001871;2.89e-14;6!UBERON:0009663;4.53e-14;7!UBERON:0002038;7.74e-12;1!UBERON:0009661;7.74e-12;1!UBERON:0002950;7.74e-12;1!UBERON:0001891;7.74e-12;1!UBERON:0001872;1.68e-09;5!UBERON:0000349;2.46e-09;5!UBERON:0000955;5.44e-09;68!UBERON:0001017;9.41e-09;75!UBERON:0001016;5.95e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.02e-41,34;UBERON:0002020,1.02e-41,34;UBERON:0002791,4.13e-37,32;UBERON:0001893,6.58e-35,34;UBERON:0002780,2.58e-34,41;UBERON:0001890,2.58e-34,41;UBERON:0003080,2.58e-34,41;UBERON:0006240,2.58e-34,41;UBERON:0000073,4.32e-31,53;UBERON:0002616,4.32e-31,53;UBERON:0001869,1.46e-30,32;UBERON:0001049,2.33e-29,56;UBERON:0005068,2.33e-29,56;UBERON:0006241,2.33e-29,56;UBERON:0007135,2.33e-29,56;UBERON:0002619,2.07e-28,22;UBERON:0000956,4.87e-25,25;UBERON:0000203,4.87e-25,25;UBERON:0001950,6.46e-24,20;UBERON:0000955,1.44e-23,68;UBERON:0006238,1.44e-23,68;UBERON:0003056,1.03e-22,61;UBERON:0002771,2.06e-22,2;UBERON:0001875,3.53e-22,2;UBERON:0006514,3.53e-22,2;UBERON:0001017,1.39e-19,81;UBERON:0003075,1.39e-19,82;UBERON:0007284,1.39e-19,82;UBERON:0000125,2.76e-19,9;UBERON:0002308,2.76e-19,9;UBERON:0002420,4.21e-19,9;UBERON:0007245,4.21e-19,9;UBERON:0010009,4.21e-19,9;UBERON:0010011,4.21e-19,9;UBERON:0000454,4.21e-19,9;UBERON:0002346,1.34e-18,86;UBERON:0001016,1.75e-17,89;UBERON:0000200,1.25e-16,6;UBERON:0010371,4.41e-15,104;UBERON:0009663,2.53e-14,7;UBERON:0001871,2.90e-14,6;UBERON:0002038,3.65e-12,1;UBERON:0009661,3.65e-12,1;UBERON:0002950,3.65e-12,1;UBERON:0001891,3.65e-12,1;UBERON:0009616,3.65e-12,1;UBERON:0010286,3.65e-12,1;UBERON:0007023,1.40e-11,114;UBERON:0010314,1.70e-11,132;UBERON:0004121,8.54e-10,171;UBERON:0000924,8.54e-10,171;UBERON:0006601,8.54e-10,171;UBERON:0000349,2.08e-09,5;UBERON:0001872,2.27e-09,5;UBERON:0000025,2.67e-07,192;UBERON:0002148,9.96e-07,2;UBERON:0006331,9.96e-07,2;UBERON:0009662,9.96e-07,2 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.623912584592421,1.24900292158013,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,1.28055318027145,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.702793337176017,0.182454789215666,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.949661939338181,0,0,0,0,0,0.458146384663663,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,5.36915565568638,1.251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0.552032215008773,0,0,0,0.256916900385838,0,1.11743701340006,0.615349092722265,0.756215088665154,0,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.337687923091973,2.34323429584154,1.03343398250592,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,0,1.72007499781742,0.315543124386369,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | |phase1_expression=1.09007027562334,0.856402095563933,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0.623912584592421,1.24900292158013,0.315404830067869,0.585707074963566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,0.256278298511402,0,0.321707842287215,0,0.154209693802656,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0.290033387828457,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,1.28055318027145,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0.307160702099232,0,1.1253553312841,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,0,0.221158519862449,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,0.702793337176017,0.182454789215666,0,0,0.394584402849391,0,0.61214552326098,0,0,0,0,0,0,0,0,0.832048038078832,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.949661939338181,0,0,0,0,0,0.458146384663663,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,1.64286454670392,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,1.85125642439766,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,5.36915565568638,1.251909307065,0.573409195690071,0.221858103073705,0.248385611765534,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0,0,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0.212574920101683,0,0,0,0.552032215008773,0,0,0,0.256916900385838,0,1.11743701340006,0.615349092722265,0.756215088665154,0,0.968853873791107,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0.163771917510097,0,0.337687923091973,2.34323429584154,1.03343398250592,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0.227662191351298,0,0,0,0.40781839786099,0.131545547125698,0,0,0,0.628462359664008,0,0,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0.235676547101626,0.196308467114945,0.594092800654172,0.8453114551668,0,0,0,0,0,0,0,0,0,1.72007499781742,0.315543124386369,0.271965960763659,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0.665756774185513,0,0 | ||
|short_description=p@chr13:67800290..67800302,- | |short_description=p@chr13:67800290..67800302,- | ||
}} | }} |
Latest revision as of 16:56, 24 July 2015
Short description: | p@chr13:67800290..67800302, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:67800290..67800302, - |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 3.59e-11 | 4 |