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FFCP PHASE1:Mm9::chr6:125165394..125165408,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22317
|EntrezGene=22317
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=Q62442
|UniProt=Q62442
|association_with_transcript=-160bp_to_ENSMUST00000032487_5end
|association_with_transcript=-160bp_to_ENSMUST00000032487_5end
|cluster_id=chr6:125165394..125165408,+
|description=CAGE_peak_3_at_Vamp1_5end
|description=CAGE_peak_3_at_Vamp1_5end
|id=chr6:125165394..125165408,+
|id=chr6:125165394..125165408,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000893,2.13e-07,6;CL:0002489,2.13e-07,6;CL:0000898,2.13e-07,6;CL:0000809,2.13e-07,6;CL:0000810,2.13e-07,6;CL:0000895,2.13e-07,6;CL:0000808,2.13e-07,6;CL:0000894,2.13e-07,6;CL:0000806,2.13e-07,6;CL:0000807,2.13e-07,6;CL:0000805,2.13e-07,6;CL:0002425,2.13e-07,6;CL:0002436,2.13e-07,6;CL:0002427,2.13e-07,6;CL:0002428,2.13e-07,6;CL:0002429,2.13e-07,6;CL:0002433,2.13e-07,6;CL:0002431,2.13e-07,6;CL:0002432,2.13e-07,6;CL:0000791,2.85e-07,9;CL:0000789,2.85e-07,9;CL:0002420,2.85e-07,9;CL:0002419,2.85e-07,9;CL:0000790,2.85e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!1.24e-11!86;UBERON:0002370!1.86e-10!23;UBERON:0000974!1.86e-10!23;UBERON:0004807!1.86e-10!23;UBERON:0005058!1.86e-10!23;UBERON:0003351!1.86e-10!23;UBERON:0009113!1.86e-10!23;UBERON:0003295!1.86e-10!23;UBERON:0009722!1.86e-10!23;UBERON:0005562!1.86e-10!23;UBERON:0007690!1.86e-10!23;UBERON:0000153!4.86e-10!94;UBERON:0006562!1.13e-09!24;UBERON:0003408!1.13e-09!24;UBERON:0001557!1.13e-09!24;UBERON:0001042!1.13e-09!24;UBERON:0008814!1.13e-09!24;UBERON:0009145!1.13e-09!24;UBERON:0000064!5.03e-09!99;UBERON:0000063!1.63e-08!35;UBERON:0001017!5.10e-08!73;UBERON:0005743!5.10e-08!73;UBERON:0000072!1.02e-07!27;UBERON:0000073!2.00e-07!75;UBERON:0001016!2.00e-07!75;UBERON:0004177!2.62e-07!29;UBERON:0000483!2.79e-07!181;UBERON:0000119!6.34e-07!183
|ontology_enrichment_uberon=UBERON:0007811!1.24e-11!86;UBERON:0002370!1.86e-10!23;UBERON:0000974!1.86e-10!23;UBERON:0004807!1.86e-10!23;UBERON:0005058!1.86e-10!23;UBERON:0003351!1.86e-10!23;UBERON:0009113!1.86e-10!23;UBERON:0003295!1.86e-10!23;UBERON:0009722!1.86e-10!23;UBERON:0005562!1.86e-10!23;UBERON:0007690!1.86e-10!23;UBERON:0000153!4.86e-10!94;UBERON:0006562!1.13e-09!24;UBERON:0003408!1.13e-09!24;UBERON:0001557!1.13e-09!24;UBERON:0001042!1.13e-09!24;UBERON:0008814!1.13e-09!24;UBERON:0009145!1.13e-09!24;UBERON:0000064!5.03e-09!99;UBERON:0000063!1.63e-08!35;UBERON:0001017!5.10e-08!73;UBERON:0005743!5.10e-08!73;UBERON:0000072!1.02e-07!27;UBERON:0000073!2.00e-07!75;UBERON:0001016!2.00e-07!75;UBERON:0004177!2.62e-07!29;UBERON:0000483!2.79e-07!181;UBERON:0000119!6.34e-07!183
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.87e-26,23;UBERON:0000974,1.87e-26,23;UBERON:0004807,1.87e-26,23;UBERON:0005058,1.87e-26,23;UBERON:0003351,1.87e-26,23;UBERON:0009113,1.87e-26,23;UBERON:0003295,1.87e-26,23;UBERON:0009722,1.87e-26,23;UBERON:0005562,1.87e-26,23;UBERON:0007690,1.87e-26,23;UBERON:0006562,3.27e-25,24;UBERON:0003408,3.27e-25,24;UBERON:0001557,3.27e-25,24;UBERON:0001042,3.27e-25,24;UBERON:0008814,3.27e-25,24;UBERON:0009145,3.27e-25,24;UBERON:0000072,4.90e-22,27;UBERON:0004177,2.76e-20,29;UBERON:0005057,2.76e-20,29;UBERON:0000077,3.12e-16,35;UBERON:0007811,1.09e-15,36;UBERON:0000065,2.28e-13,41;UBERON:0001004,5.69e-13,42;UBERON:0000153,1.36e-12,43;UBERON:0002390,6.93e-12,45;UBERON:0003061,6.93e-12,45;UBERON:0002193,6.16e-11,48;UBERON:0002405,6.16e-11,48;UBERON:0003929,3.95e-09,55;UBERON:0002368,4.23e-08,60;UBERON:0003076,5.27e-08,12;UBERON:0003057,5.27e-08,12;UBERON:0011216,9.36e-08,194;UBERON:0002240,1.11e-07,6;UBERON:0005174,1.11e-07,6;UBERON:0001137,1.11e-07,6;UBERON:0000483,1.62e-07,174;UBERON:0000119,2.29e-07,176;UBERON:0002530,3.12e-07,65;UBERON:0000490,4.49e-07,66;UBERON:0001896,9.20e-07,2;UBERON:0002298,9.20e-07,2;UBERON:0005290,9.20e-07,2;UBERON:0010096,9.20e-07,2
|phase1_expression=0.320297694209588,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,0.516493293766305,2.111830832275,3.04283884218592,0,0.159544317990673,1.36960583944965,1.04904482902797,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.680346321208558,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0.122490799214954,0,0,3.30347642998166,0.383062014255563,0.921639199537461,0,0,0,1.67509799400829,0,0.61119299110724,1.47314292736834,0.854230084794618,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0,0,0,0.301445281105245,0,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0.125654352112864,1.91206752211504,0.767146371990992,1.66230435647648,0.648965052271031,0,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.438599962275997,0.219550115291051,0.268412837520744,1.47202963994889,0,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,4.17431533968259,1.87538698547525,0,0,0.94652465824877,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.329098041204242,0,0,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,3.52308073819968,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,10.7443781013581,0.405450430580328,0.308132871494482,0.909445760844565,2.50637373934474,3.9736270956253,7.93289966831794,5.1691334511102,10.7024436945036,11.507227804905,12.7040993272419,11.8898614502498,14.3355644044091,19.4015657621404,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843
|phase1_expression=0.320297694209588,0,0.909998478779072,0.30246421130683,0.500895729946347,0.16787927191189,0.700837921786577,0.516493293766305,2.111830832275,3.04283884218592,0,0.159544317990673,1.36960583944965,1.04904482902797,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.680346321208558,0.695036658406197,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0.418531630736908,0,0,1.17646297606203,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0.725362142011344,1.34437519656986,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,1.71390590642282,2.42955395046775,0.122490799214954,0,0,3.30347642998166,0.383062014255563,0.921639199537461,0,0,0,1.67509799400829,0,0.61119299110724,1.47314292736834,0.854230084794618,0.186399445825301,0,0,0.579728977403356,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0.281686839553361,0,0,0,0,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0,0,0,0.301445281105245,0,0.376999773989026,0,0.144599356919912,0,0,0.220841518460394,0,0,0.585561594023094,0.83778682725382,0.255457055208591,0,0,0.127070227073065,1.19832511523858,0.915001205637253,0.125654352112864,1.91206752211504,0.767146371990992,1.66230435647648,0.648965052271031,0,0,0.505445516867349,0.210441855886474,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0.162137619091711,0.438599962275997,0.219550115291051,0.268412837520744,1.47202963994889,0,0,0,0,0,0.257734922644187,0,0,0,0.474529061544512,0,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,4.17431533968259,1.87538698547525,0,0,0.94652465824877,0,1.07711698866399,0,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,0.963963949265421,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0.329098041204242,0,0,0,0.441056796109924,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,3.52308073819968,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0,0,0,0.108005340821801,0,0,0,0.165306911450672,0,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0,0,0.104859344425711,0,0,10.7443781013581,0.405450430580328,0.308132871494482,0.909445760844565,2.50637373934474,3.9736270956253,7.93289966831794,5.1691334511102,10.7024436945036,11.507227804905,12.7040993272419,11.8898614502498,14.3355644044091,19.4015657621404,0,0,0,0,0,0.187682475451182,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0.44449345560323,0,0,0.252697211763798,0.25347929989024,0,0,0,0.17230640686684,0,0,0.192909220463705,0,0,0.342869252385415,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0.182927972872773,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.309873682371932,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843
|short_description=p3@Vamp1
|short_description=p3@Vamp1
}}
}}

Latest revision as of 16:54, 26 September 2015

Short description:p3@Vamp1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Vamp1_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -160bp_to_ENSMUST00000032487_5end
EntrezGene:Vamp1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Vamp1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.52
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.11
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.05
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.68
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.38
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.61
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.85
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.84
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D51.91
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.07
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.08
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B510.74
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.91
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F87.93
thymus, neonate N03.CNhs11137.2104-43C75.17
thymus, neonate N06.CNhs11197.681-26C410.70
thymus, neonate N07.CNhs11211.713-19D311.51
thymus, neonate N10.CNhs11194.748-24E412.70
thymus, neonate N20.CNhs11186.820-7A211.89
thymus, neonate N25.CNhs11125.1362-25G714.34
thymus, neonate N30.CNhs11132.1393-42G219.40
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
thymocyte2.13e-076
double negative thymocyte2.13e-076
naive T cell2.13e-076
double-positive, alpha-beta thymocyte2.13e-076
CD4-positive, alpha-beta thymocyte2.13e-076
naive thymus-derived CD4-positive, alpha-beta T cell2.13e-076
DN4 thymocyte2.13e-076
DN1 thymic pro-T cell2.13e-076
DN2 thymocyte2.13e-076
DN3 thymocyte2.13e-076
immature single positive thymocyte2.13e-076
early T lineage precursor2.13e-076
mature CD4 single-positive thymocyte2.13e-076
resting double-positive thymocyte2.13e-076
double-positive blast2.13e-076
CD69-positive double-positive thymocyte2.13e-076
CD69-positive, CD4-positive single-positive thymocyte2.13e-076
CD4-positive, CD8-intermediate double-positive thymocyte2.13e-076
CD24-positive, CD4 single-positive thymocyte2.13e-076
mature alpha-beta T cell2.85e-079
alpha-beta T cell2.85e-079
immature T cell2.85e-079
mature T cell2.85e-079
immature alpha-beta T cell2.85e-079

Uber anatomy
Ontology termp-valuen
thymus1.87e-2623
neck1.87e-2623
respiratory system epithelium1.87e-2623
hemolymphoid system gland1.87e-2623
pharyngeal epithelium1.87e-2623
thymic region1.87e-2623
pharyngeal gland1.87e-2623
entire pharyngeal arch endoderm1.87e-2623
thymus primordium1.87e-2623
early pharyngeal endoderm1.87e-2623
pharynx3.27e-2524
gland of gut3.27e-2524
upper respiratory tract3.27e-2524
chordate pharynx3.27e-2524
pharyngeal arch system3.27e-2524
pharyngeal region of foregut3.27e-2524
segment of respiratory tract4.90e-2227
hemopoietic organ2.76e-2029
immune organ2.76e-2029
mixed endoderm/mesoderm-derived structure3.12e-1635
craniocervical region1.09e-1536
respiratory tract2.28e-1341
respiratory system5.69e-1342
anterior region of body1.36e-1243
hematopoietic system6.93e-1245
blood island6.93e-1245
hemolymphoid system6.16e-1148
immune system6.16e-1148
gut epithelium3.95e-0955
endocrine gland4.23e-0860
posterior neural tube5.27e-0812
chordal neural plate5.27e-0812
organ system subdivision9.36e-08194
spinal cord1.11e-076
dorsal region element1.11e-076
dorsum1.11e-076
epithelium1.62e-07174
cell layer2.29e-07176
gland3.12e-0765
unilaminar epithelium4.49e-0766
medulla oblongata9.20e-072
brainstem9.20e-072
myelencephalon9.20e-072
future myelencephalon9.20e-072
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