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FFCP PHASE1:Mm9::chr6:128349806..128349843,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=60345
|EntrezGene=60345
|HGNC=
|HGNC=
|MCL_coexpression_id=20
|TSSclassifier=NA
|UniProt=Q9JHR9
|UniProt=Q9JHR9
|association_with_transcript=22bp_to_ENSMUST00000001561,NM_001162858,NM_021717,uc009edn.2,uc012etb.1_5end
|association_with_transcript=22bp_to_ENSMUST00000001561,NM_001162858,NM_021717,uc009edn.2,uc012etb.1_5end
|cluster_id=chr6:128349806..128349843,+
|description=CAGE_peak_2_at_Nrip2_5end
|description=CAGE_peak_2_at_Nrip2_5end
|id=chr6:128349806..128349843,+
|id=chr6:128349806..128349843,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,7.65e-08,23;CL:0000337,7.65e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!6.46e-11!52;UBERON:0005068!6.46e-11!52;UBERON:0006241!6.46e-11!52;UBERON:0007135!6.46e-11!52;UBERON:0000955!2.63e-10!50;UBERON:0006238!2.63e-10!50;UBERON:0002346!5.17e-10!71;UBERON:0003075!5.17e-10!71;UBERON:0007284!5.17e-10!71;UBERON:0002616!8.03e-10!49;UBERON:0001017!1.29e-09!73;UBERON:0005743!1.29e-09!73;UBERON:0000073!3.77e-09!75;UBERON:0001016!3.77e-09!75;UBERON:0004121!4.69e-09!102;UBERON:0000924!4.69e-09!102;UBERON:0006601!4.69e-09!102;UBERON:0000033!5.14e-09!63;UBERON:0000489!6.15e-09!21;UBERON:0002020!1.13e-08!34;UBERON:0003080!2.67e-07!40;UBERON:0003056!2.90e-07!49;UBERON:0000468!5.28e-07!333;UBERON:0002780!9.07e-07!39;UBERON:0001890!9.07e-07!39;UBERON:0006240!9.07e-07!39
|ontology_enrichment_uberon=UBERON:0001049!6.46e-11!52;UBERON:0005068!6.46e-11!52;UBERON:0006241!6.46e-11!52;UBERON:0007135!6.46e-11!52;UBERON:0000955!2.63e-10!50;UBERON:0006238!2.63e-10!50;UBERON:0002346!5.17e-10!71;UBERON:0003075!5.17e-10!71;UBERON:0007284!5.17e-10!71;UBERON:0002616!8.03e-10!49;UBERON:0001017!1.29e-09!73;UBERON:0005743!1.29e-09!73;UBERON:0000073!3.77e-09!75;UBERON:0001016!3.77e-09!75;UBERON:0004121!4.69e-09!102;UBERON:0000924!4.69e-09!102;UBERON:0006601!4.69e-09!102;UBERON:0000033!5.14e-09!63;UBERON:0000489!6.15e-09!21;UBERON:0002020!1.13e-08!34;UBERON:0003080!2.67e-07!40;UBERON:0003056!2.90e-07!49;UBERON:0000468!5.28e-07!333;UBERON:0002780!9.07e-07!39;UBERON:0001890!9.07e-07!39;UBERON:0006240!9.07e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.88e-15,54;UBERON:0001049,2.16e-13,52;UBERON:0005068,2.16e-13,52;UBERON:0006241,2.16e-13,52;UBERON:0007135,2.16e-13,52;UBERON:0001017,3.13e-13,73;UBERON:0001016,1.41e-12,75;UBERON:0000489,9.97e-12,21;UBERON:0002020,7.13e-11,34;UBERON:0000955,1.33e-10,47;UBERON:0006238,1.33e-10,47;UBERON:0002616,6.97e-10,46;UBERON:0002346,7.01e-10,64;UBERON:0003075,7.01e-10,64;UBERON:0007284,7.01e-10,64;UBERON:0002113,1.50e-08,14;UBERON:0003918,1.50e-08,14;UBERON:0011143,1.50e-08,14;UBERON:0005095,1.50e-08,14;UBERON:0007687,1.50e-08,14;UBERON:0002021,2.81e-08,10;UBERON:0000411,2.81e-08,10;UBERON:0001950,2.81e-08,10;UBERON:0004121,3.18e-08,95;UBERON:0000924,3.18e-08,95;UBERON:0006601,3.18e-08,95;UBERON:0003528,3.41e-08,29;UBERON:0002791,3.41e-08,29;UBERON:0001893,3.41e-08,29;UBERON:0003076,8.46e-08,12;UBERON:0003057,8.46e-08,12;UBERON:0010371,1.38e-07,73;UBERON:0003080,1.38e-07,40;UBERON:0006554,2.94e-07,18;UBERON:0002780,8.10e-07,39;UBERON:0001890,8.10e-07,39;UBERON:0006240,8.10e-07,39
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979904951377538,0,0,0,0,0,0.573066879877513,0,1.61853168687678,2.64495489636016,1.26766280701236,0,1.77858959222228,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.210324961351382,4.85606673486466,3.75476519617743,0.244981598429908,0.0958454710182364,0,14.3150645299205,8.17198963745201,8.29475279583715,2.1101806036831,0.914876436024097,0.52091337055676,12.5632349550621,10.6924895906019,5.80633341551878,5.00868595305235,3.70166370077668,0.931997229126503,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,2.13125834818499,0.922461989024234,1.05505848386836,0.705532242814229,0.376999773989026,0.247194967734374,0.578397427679647,0,0.647067399789637,0.662524555381181,0.484875253135222,0,3.80615036115011,5.23616767033638,0.510914110417183,0,0,0,13.6309481858389,5.03250663100489,1.00523481690292,5.04090528557602,5.37002460393694,10.5971902725376,10.5456820994042,0.712875546952214,0.995255764880744,3.0326731012041,0.420883711772948,0.650602214813519,0,0.540186389416048,0.90422890701429,0.408218994907967,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.527853372491847,1.09597866213787,0.556094498451196,0,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0.32833492815819,1.21603214318784,0.438599962275997,0.658650345873152,0.402619256281115,9.67333763394985,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.398282546508734,3.41402221715547,5.1411830674378,4.50830942692322,5.7022371796688,4.84881217919064,5.33032231166421,4.55303067294652,1.47610147979602,1.8839847340965,1.60416313098341,0,0.166845105716094,0.786235980452812,0.224862112384854,0.202860121388503,0.964708639009667,1.52775511068852,0.575392274901621,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,12.36239542906,8.20481806145422,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,3.85585579706168,1.56134093729095,3.02711526234334,0.651547837414304,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.776152102696527,0,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,2.58138878870081,0.21183207086382,0,0.49465875882444,0.484393280087717,0.482503399425247,0.596861720015682,0.328281799490123,0,9.27126510052548,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0.436725127492355,0.134864346384821,0.495920734352016,0.785267825952089,0.259229946583586,0,0.56369293868419,0.149516546043979,0.66183396182839,0.388902376688095,0.645799117388655,1.35164900392623,1.76035857968631,0.781226309063701,0.734015410979976,0.724752362478018,0.576060012515731,0,0.608175645870493,1.54066435747241,1.16928740680016,0.716106782669926,0.79472541912506,0.480781798079875,0.295379054349154,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.19318959403219,2.25218970541418,0.36630324853453,0.214368379079066,0,1.6942555278512,1.84130094602871,2.29158205375759,3.43706364687375,4.11049511862385,3.0215755895588,2.70009000092722,0.900642406448441,4.07828168085784,4.65984280576638,0,0.798049746802062,0.170733605754134,0.243106717068294,1.04806581313991,0.919217542250071,2.00022055021454,2.26638562962784,0.962757628775446,1.51618327058278,0.50695859978048,1.32038438970253,1.31098110457835,1.02440243847791,1.37845125493472,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,0.883193520806384,0.685738504770831,0.532427418478012,1.1921809497366,0.726732083161643,1.31753132581463,1.35383372626682,0.914639864363863,2.10455769150274,0.679020569229309,1.68342681497322,1.18635018124174,0.886540341380071,0.409231043169689,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,0.644613162144895,0.382576664137687,1.98532277207564,1.15933917810211
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979904951377538,0,0,0,0,0,0.573066879877513,0,1.61853168687678,2.64495489636016,1.26766280701236,0,1.77858959222228,0,0,0,0,0.384218305321555,0.103689612308478,0.405017814995072,0.210324961351382,4.85606673486466,3.75476519617743,0.244981598429908,0.0958454710182364,0,14.3150645299205,8.17198963745201,8.29475279583715,2.1101806036831,0.914876436024097,0.52091337055676,12.5632349550621,10.6924895906019,5.80633341551878,5.00868595305235,3.70166370077668,0.931997229126503,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.561777680527007,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0.173485326766136,2.13125834818499,0.922461989024234,1.05505848386836,0.705532242814229,0.376999773989026,0.247194967734374,0.578397427679647,0,0.647067399789637,0.662524555381181,0.484875253135222,0,3.80615036115011,5.23616767033638,0.510914110417183,0,0,0,13.6309481858389,5.03250663100489,1.00523481690292,5.04090528557602,5.37002460393694,10.5971902725376,10.5456820994042,0.712875546952214,0.995255764880744,3.0326731012041,0.420883711772948,0.650602214813519,0,0.540186389416048,0.90422890701429,0.408218994907967,0.640568601424249,0.281105173679186,1.03481348295606,0,0.189106080167819,0.527853372491847,1.09597866213787,0.556094498451196,0,1.02891068203972,0.796137067273973,0,0,0,0.207125772535502,0.469052119962192,0,0.23674473558521,0,0.154267112887378,0,0.536546802799238,0,0.329119699826961,0.32833492815819,1.21603214318784,0.438599962275997,0.658650345873152,0.402619256281115,9.67333763394985,0.823236899034275,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.403367049246685,0,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.795825888164603,0.58489226135736,0,0.432276099749388,0.398282546508734,3.41402221715547,5.1411830674378,4.50830942692322,5.7022371796688,4.84881217919064,5.33032231166421,4.55303067294652,1.47610147979602,1.8839847340965,1.60416313098341,0,0.166845105716094,0.786235980452812,0.224862112384854,0.202860121388503,0.964708639009667,1.52775511068852,0.575392274901621,0,0,0,0,0,0,0.179397413521912,0,0,0.189491411770485,0,0.339490171550376,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0.478364305972461,0.163863314715738,0.172684981865896,0,0,0,0,0.275936746304732,12.36239542906,8.20481806145422,0,0.757412781613119,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0.395287777946524,3.85585579706168,1.56134093729095,3.02711526234334,0.651547837414304,1.48473110675282,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0,0.727067458955011,1.06949213515416,0.632073515871632,0,0,0.680879211507576,0.18006109403131,0.776152102696527,0,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,2.58138878870081,0.21183207086382,0,0.49465875882444,0.484393280087717,0.482503399425247,0.596861720015682,0.328281799490123,0,9.27126510052548,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0.216010681643603,0,0.436725127492355,0.134864346384821,0.495920734352016,0.785267825952089,0.259229946583586,0,0.56369293868419,0.149516546043979,0.66183396182839,0.388902376688095,0.645799117388655,1.35164900392623,1.76035857968631,0.781226309063701,0.734015410979976,0.724752362478018,0.576060012515731,0,0.608175645870493,1.54066435747241,1.16928740680016,0.716106782669926,0.79472541912506,0.480781798079875,0.295379054349154,0.100966449948148,0.0762068066549998,0.201652370273681,0,0,0.116876902181569,0,0,0,0,0.19318959403219,2.25218970541418,0.36630324853453,0.214368379079066,0,1.6942555278512,1.84130094602871,2.29158205375759,3.43706364687375,4.11049511862385,3.0215755895588,2.70009000092722,0.900642406448441,4.07828168085784,4.65984280576638,0,0.798049746802062,0.170733605754134,0.243106717068294,1.04806581313991,0.919217542250071,2.00022055021454,2.26638562962784,0.962757628775446,1.51618327058278,0.50695859978048,1.32038438970253,1.31098110457835,1.02440243847791,1.37845125493472,0.476293691283074,0.579421629724277,0.964546102318525,0.824171801606613,0.883193520806384,0.685738504770831,0.532427418478012,1.1921809497366,0.726732083161643,1.31753132581463,1.35383372626682,0.914639864363863,2.10455769150274,0.679020569229309,1.68342681497322,1.18635018124174,0.886540341380071,0.409231043169689,0.619747364743864,0.578719832943424,0.999242311751784,0.701794825336225,0.644613162144895,0.382576664137687,1.98532277207564,1.15933917810211
|short_description=p2@Nrip2
|short_description=p2@Nrip2
}}
}}

Latest revision as of 18:01, 26 September 2015

Short description:p2@Nrip2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Nrip2_5end
Coexpression cluster:MCL_coexpression_mm9:20
Association with transcript: 22bp_to_ENSMUST00000001561, NM_001162858, NM_021717, uc009edn.2, uc012etb.1_5end
EntrezGene:Nrip2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Nrip2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.87
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.62
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.91
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E412.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E510.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.81
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.71
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.66
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I25.24
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A413.63
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D55.04
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F210.60
diencephalon, neonate N30.CNhs11201.1388-42B210.55
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C60.41
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A81.10
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E89.67
hippocampus, neonate N00.CNhs11228.627-43G10.82
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I93.41
kidney, embryo E15.CNhs10997.434-16F85.14
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.70
kidney, embryo E18.CNhs11001.1288-20C74.85
kidney, neonate N00.CNhs11214.646-21G75.33
kidney, neonate N10.CNhs11206.758-6D54.55
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.60
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C212.36
medulla oblongata, neonate N30.CNhs11200.1396-42A38.20
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I71.56
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G61.48
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.49
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.60
skin, neonate N10.CNhs11108.762-6C40.33
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C99.27
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.03
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.50
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G51.35
testis, neonate N00.CNhs11189.1300-22B71.76
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.54
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.79
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.37
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.44
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A44.11
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B41.16





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.65e-0823
neuroblast (sensu Vertebrata)7.65e-0823

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.88e-1554
neural tube2.16e-1352
neural rod2.16e-1352
future spinal cord2.16e-1352
neural keel2.16e-1352
central nervous system3.13e-1373
nervous system1.41e-1275
cavitated compound organ9.97e-1221
gray matter7.13e-1134
brain1.33e-1047
future brain1.33e-1047
regional part of brain6.97e-1046
neurectoderm7.01e-1064
neural plate7.01e-1064
presumptive neural plate7.01e-1064
kidney1.50e-0814
kidney mesenchyme1.50e-0814
upper urinary tract1.50e-0814
kidney rudiment1.50e-0814
kidney field1.50e-0814
occipital lobe2.81e-0810
visual cortex2.81e-0810
neocortex2.81e-0810
ectoderm-derived structure3.18e-0895
ectoderm3.18e-0895
presumptive ectoderm3.18e-0895
brain grey matter3.41e-0829
regional part of telencephalon3.41e-0829
telencephalon3.41e-0829
posterior neural tube8.46e-0812
chordal neural plate8.46e-0812
ecto-epithelium1.38e-0773
anterior neural tube1.38e-0740
urinary system structure2.94e-0718
regional part of forebrain8.10e-0739
forebrain8.10e-0739
future forebrain8.10e-0739
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