FFCP PHASE1:Hg19::chr11:31825588..31825613,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |EntrezGene=5080 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |HGNC=8620 | ||
|TSSclassifier=strong | |||
|UniProt=G3V4N4,E9PS79 | |UniProt=G3V4N4,E9PS79 | ||
|association_with_transcript=0bp_to_ENST00000470027,ENST00000471303_5end | |association_with_transcript=0bp_to_ENST00000470027,ENST00000471303_5end | ||
|cluster_id=chr11:31825588..31825613,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_8_at_PAX6_5end | |description=CAGE_peak_8_at_PAX6_5end | ||
|id=chr11:31825588..31825613,- | |id=chr11:31825588..31825613,- | ||
|ontology_enrichment_celltype=CL:0000064!5.30e-10!3;CL:0005012!5.30e-10!3;CL:0000067!5.30e-10!3;CL:0002304!5.30e-10!3;CL:0000075!1.98e-07!27;CL:0000306!2.13e-07!4;CL:0002222!2.13e-07!4;CL:0002224!2.13e-07!4 | |ontology_enrichment_celltype=CL:0000064!5.30e-10!3;CL:0005012!5.30e-10!3;CL:0000067!5.30e-10!3;CL:0002304!5.30e-10!3;CL:0000075!1.98e-07!27;CL:0000306!2.13e-07!4;CL:0002222!2.13e-07!4;CL:0002224!2.13e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.56e-24;3!CL:0000067;5.56e-24;3!CL:0005012;5.56e-24;3!CL:0002304;5.56e-24;3!CL:0000075;8.61e-22;27!CL:0000306;7.42e-18;4!CL:0002222;7.42e-18;4!CL:0002224;7.42e-18;4!CL:0000047;3.49e-16;2!CL:0000710;1.61e-13;20!CL:0002322;3.11e-07;5!CL:0002077;3.54e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,3.62e-24,3;CL:0000067,3.62e-24,3;CL:0005012,3.62e-24,3;CL:0002304,3.62e-24,3;CL:0000075,8.30e-22,27;CL:0000306,8.34e-18,4;CL:0002222,8.34e-18,4;CL:0002224,8.34e-18,4;CL:0000710,1.49e-13,20;CL:0002077,9.14e-08,34;CL:0002322,2.88e-07,5;CL:0000133,5.00e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.97e-24;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003075!1.76e-73!86;UBERON:0007284!1.76e-73!86;UBERON:0002346!1.18e-69!90;UBERON:0001049!2.85e-61!57;UBERON:0005068!2.85e-61!57;UBERON:0006241!2.85e-61!57;UBERON:0007135!2.85e-61!57;UBERON:0003056!3.52e-61!61;UBERON:0005743!1.52e-59!86;UBERON:0002616!1.08e-55!59;UBERON:0001017!4.86e-54!82;UBERON:0000073!7.74e-53!94;UBERON:0001016!7.74e-53!94;UBERON:0002780!9.95e-50!41;UBERON:0001890!9.95e-50!41;UBERON:0006240!9.95e-50!41;UBERON:0001893!1.28e-48!34;UBERON:0003080!2.25e-48!42;UBERON:0000955!5.26e-48!69;UBERON:0006238!5.26e-48!69;UBERON:0002791!1.84e-46!33;UBERON:0002020!8.86e-45!34;UBERON:0003528!8.86e-45!34;UBERON:0001869!3.75e-44!32;UBERON:0000033!5.03e-41!123;UBERON:0000153!2.45e-40!129;UBERON:0007811!2.45e-40!129;UBERON:0000956!3.61e-40!25;UBERON:0000203!3.61e-40!25;UBERON:0002619!2.17e-37!22;UBERON:0001950!3.45e-37!20;UBERON:0004121!5.66e-37!169;UBERON:0000924!8.18e-36!173;UBERON:0006601!8.18e-36!173;UBERON:0007023!1.02e-28!115;UBERON:0007625!1.66e-20!11;UBERON:0000064!6.58e-20!219;UBERON:0000483!7.07e-17!309;UBERON:0000119!1.40e-16!312;UBERON:0000970!5.96e-16!20;UBERON:0001871!1.43e-15!7;UBERON:0002104!4.59e-15!21;UBERON:0000025!1.27e-14!194;UBERON:0004733!5.11e-14!12;UBERON:0002028!5.11e-14!12;UBERON:0007277!5.11e-14!12;UBERON:0000019!8.00e-14!19;UBERON:0000047!8.00e-14!19;UBERON:0004088!8.00e-14!19;UBERON:0003072!8.00e-14!19;UBERON:0003071!8.00e-14!19;UBERON:0004128!8.00e-14!19;UBERON:0001872!9.90e-14!5;UBERON:0003076!1.25e-13!15;UBERON:0003057!1.25e-13!15;UBERON:0002021!1.26e-13!5;UBERON:0000020!1.60e-13!23;UBERON:0001032!7.53e-13!24;UBERON:0004456!7.53e-13!24;UBERON:0004732!7.99e-13!13;UBERON:0000488!1.54e-12!4;UBERON:0001456!2.74e-12!21;UBERON:0000475!2.36e-11!365;UBERON:0002680!3.43e-11!9;UBERON:0001895!3.43e-11!9;UBERON:0010092!3.43e-11!9;UBERON:0000200!8.07e-11!6;UBERON:0000477!1.45e-10!286;UBERON:0004111!1.91e-10!241;UBERON:0002420!2.80e-10!9;UBERON:0007245!2.80e-10!9;UBERON:0010009!2.80e-10!9;UBERON:0010011!2.80e-10!9;UBERON:0000454!2.80e-10!9;UBERON:0001778!5.30e-10!3;UBERON:0001775!5.30e-10!3;UBERON:0000481!5.56e-10!347;UBERON:0001801!1.12e-09!14;UBERON:0000349!6.13e-09!5;UBERON:0000062!6.33e-09!511;UBERON:0002771!1.44e-08!3;UBERON:0002203!2.48e-08!6;UBERON:0001768!2.48e-08!6;UBERON:0005085!2.74e-08!29;UBERON:0002298!3.07e-08!8;UBERON:0002037!3.80e-08!6;UBERON:0006215!3.80e-08!6;UBERON:0000063!1.11e-07!97;UBERON:0010077!2.13e-07!4;UBERON:0005389!2.13e-07!4;UBERON:0000484!2.13e-07!4;UBERON:0002546!2.13e-07!4;UBERON:0000965!2.13e-07!4;UBERON:0001803!2.13e-07!4;UBERON:0003073!2.13e-07!4;UBERON:0005426!2.13e-07!4;UBERON:0002308!3.99e-07!9;UBERON:0000125!3.99e-07!9 | |ontology_enrichment_uberon=UBERON:0003075!1.76e-73!86;UBERON:0007284!1.76e-73!86;UBERON:0002346!1.18e-69!90;UBERON:0001049!2.85e-61!57;UBERON:0005068!2.85e-61!57;UBERON:0006241!2.85e-61!57;UBERON:0007135!2.85e-61!57;UBERON:0003056!3.52e-61!61;UBERON:0005743!1.52e-59!86;UBERON:0002616!1.08e-55!59;UBERON:0001017!4.86e-54!82;UBERON:0000073!7.74e-53!94;UBERON:0001016!7.74e-53!94;UBERON:0002780!9.95e-50!41;UBERON:0001890!9.95e-50!41;UBERON:0006240!9.95e-50!41;UBERON:0001893!1.28e-48!34;UBERON:0003080!2.25e-48!42;UBERON:0000955!5.26e-48!69;UBERON:0006238!5.26e-48!69;UBERON:0002791!1.84e-46!33;UBERON:0002020!8.86e-45!34;UBERON:0003528!8.86e-45!34;UBERON:0001869!3.75e-44!32;UBERON:0000033!5.03e-41!123;UBERON:0000153!2.45e-40!129;UBERON:0007811!2.45e-40!129;UBERON:0000956!3.61e-40!25;UBERON:0000203!3.61e-40!25;UBERON:0002619!2.17e-37!22;UBERON:0001950!3.45e-37!20;UBERON:0004121!5.66e-37!169;UBERON:0000924!8.18e-36!173;UBERON:0006601!8.18e-36!173;UBERON:0007023!1.02e-28!115;UBERON:0007625!1.66e-20!11;UBERON:0000064!6.58e-20!219;UBERON:0000483!7.07e-17!309;UBERON:0000119!1.40e-16!312;UBERON:0000970!5.96e-16!20;UBERON:0001871!1.43e-15!7;UBERON:0002104!4.59e-15!21;UBERON:0000025!1.27e-14!194;UBERON:0004733!5.11e-14!12;UBERON:0002028!5.11e-14!12;UBERON:0007277!5.11e-14!12;UBERON:0000019!8.00e-14!19;UBERON:0000047!8.00e-14!19;UBERON:0004088!8.00e-14!19;UBERON:0003072!8.00e-14!19;UBERON:0003071!8.00e-14!19;UBERON:0004128!8.00e-14!19;UBERON:0001872!9.90e-14!5;UBERON:0003076!1.25e-13!15;UBERON:0003057!1.25e-13!15;UBERON:0002021!1.26e-13!5;UBERON:0000020!1.60e-13!23;UBERON:0001032!7.53e-13!24;UBERON:0004456!7.53e-13!24;UBERON:0004732!7.99e-13!13;UBERON:0000488!1.54e-12!4;UBERON:0001456!2.74e-12!21;UBERON:0000475!2.36e-11!365;UBERON:0002680!3.43e-11!9;UBERON:0001895!3.43e-11!9;UBERON:0010092!3.43e-11!9;UBERON:0000200!8.07e-11!6;UBERON:0000477!1.45e-10!286;UBERON:0004111!1.91e-10!241;UBERON:0002420!2.80e-10!9;UBERON:0007245!2.80e-10!9;UBERON:0010009!2.80e-10!9;UBERON:0010011!2.80e-10!9;UBERON:0000454!2.80e-10!9;UBERON:0001778!5.30e-10!3;UBERON:0001775!5.30e-10!3;UBERON:0000481!5.56e-10!347;UBERON:0001801!1.12e-09!14;UBERON:0000349!6.13e-09!5;UBERON:0000062!6.33e-09!511;UBERON:0002771!1.44e-08!3;UBERON:0002203!2.48e-08!6;UBERON:0001768!2.48e-08!6;UBERON:0005085!2.74e-08!29;UBERON:0002298!3.07e-08!8;UBERON:0002037!3.80e-08!6;UBERON:0006215!3.80e-08!6;UBERON:0000063!1.11e-07!97;UBERON:0010077!2.13e-07!4;UBERON:0005389!2.13e-07!4;UBERON:0000484!2.13e-07!4;UBERON:0002546!2.13e-07!4;UBERON:0000965!2.13e-07!4;UBERON:0001803!2.13e-07!4;UBERON:0003073!2.13e-07!4;UBERON:0005426!2.13e-07!4;UBERON:0002308!3.99e-07!9;UBERON:0000125!3.99e-07!9 | ||
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| ||
|short_description=p8@PAX6 | |short_description=p8@PAX6 | ||
}} | }} |
Latest revision as of 14:48, 17 September 2015
Short description: | p8@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAX6_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000470027, ENST00000471303_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | G3V4N4E9PS79 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.62e-24 | 3 |
ciliated epithelial cell | 3.62e-24 | 3 |
multi-ciliated epithelial cell | 3.62e-24 | 3 |
non-pigmented ciliary epithelial cell | 3.62e-24 | 3 |
columnar/cuboidal epithelial cell | 8.30e-22 | 27 |
crystallin accumulating cell | 8.34e-18 | 4 |
vertebrate lens cell | 8.34e-18 | 4 |
lens epithelial cell | 8.34e-18 | 4 |
neurecto-epithelial cell | 1.49e-13 | 20 |
ecto-epithelial cell | 9.14e-08 | 34 |
embryonic stem cell | 2.88e-07 | 5 |
neurectodermal cell | 5.00e-07 | 59 |