FFCP PHASE1:Hg19::chr17:72246069..72246080,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=94015 | |EntrezGene=94015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13877 | |HGNC=13877 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000526858_5end | |association_with_transcript=-15bp_to_ENST00000526858_5end | ||
|cluster_id=chr17:72246069..72246080,+ | |||
|description=CAGE_peak_9_at_TTYH2_5end | |description=CAGE_peak_9_at_TTYH2_5end | ||
|id=chr17:72246069..72246080,+ | |id=chr17:72246069..72246080,+ | ||
|ontology_enrichment_celltype=CL:0000990!4.16e-11!8;CL:0000451!5.01e-09!10;CL:0000453!8.16e-08!5;CL:0000840!9.88e-07!5;CL:0001029!9.88e-07!5 | |ontology_enrichment_celltype=CL:0000990!4.16e-11!8;CL:0000451!5.01e-09!10;CL:0000453!8.16e-08!5;CL:0000840!9.88e-07!5;CL:0001029!9.88e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;3.27e-23;3!CL:0000148;6.13e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,4.09e-23,3;CL:0000148,6.56e-08,10;CL:0000541,6.56e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.39e-66;1!UBERON:0003056;3.27e-23;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.58e-12!115;UBERON:0002298!9.42e-12!8;UBERON:0001049!1.59e-11!57;UBERON:0005068!1.59e-11!57;UBERON:0006241!1.59e-11!57;UBERON:0007135!1.59e-11!57;UBERON:0000955!3.43e-10!69;UBERON:0006238!3.43e-10!69;UBERON:0005162!1.10e-09!2;UBERON:0000122!1.10e-09!2;UBERON:0002616!1.91e-09!59;UBERON:0001017!2.60e-09!82;UBERON:0000073!9.81e-09!94;UBERON:0001016!9.81e-09!94;UBERON:0005743!1.02e-08!86;UBERON:0002346!2.65e-08!90;UBERON:0000153!3.77e-08!129;UBERON:0007811!3.77e-08!129;UBERON:0003075!1.10e-07!86;UBERON:0007284!1.10e-07!86;UBERON:0002780!2.12e-07!41;UBERON:0001890!2.12e-07!41;UBERON:0006240!2.12e-07!41;UBERON:0001893!2.16e-07!34;UBERON:0004732!3.22e-07!13;UBERON:0003080!3.47e-07!42;UBERON:0002308!5.27e-07!9;UBERON:0000125!5.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.39e-66;1!UBERON:0001785;2.39e-66;1!UBERON:0002464;2.39e-66;1!UBERON:0004904;2.39e-66;1!UBERON:0001021;2.39e-66;1!UBERON:0002370;5.04e-34;2!UBERON:0003714;5.04e-34;2!UBERON:0005162;5.04e-34;2!UBERON:0000122;5.04e-34;2!UBERON:0005058;5.04e-34;2!UBERON:0009113;5.04e-34;2!UBERON:0004177;1.60e-14;5!UBERON:0005057;1.60e-14;5!UBERON:0000010;1.12e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.23e-66,1;UBERON:0001785,1.23e-66,1;UBERON:0002464,1.23e-66,1;UBERON:0004904,1.23e-66,1;UBERON:0001021,1.23e-66,1;UBERON:0003902,1.23e-66,1;UBERON:0005425,1.23e-66,1;UBERON:0003714,3.61e-34,2;UBERON:0005162,3.61e-34,2;UBERON:0000122,3.61e-34,2;UBERON:0001781,7.35e-18,4;UBERON:0002370,8.69e-18,4;UBERON:0005058,8.69e-18,4;UBERON:0009113,8.69e-18,4;UBERON:0003295,8.69e-18,4;UBERON:0005562,8.69e-18,4;UBERON:0000966,2.19e-12,6;UBERON:0005388,2.19e-12,6;UBERON:0001802,2.19e-12,6;UBERON:0003351,2.45e-12,6;UBERON:0004177,8.99e-11,7;UBERON:0005057,8.99e-11,7;UBERON:0000010,1.04e-08,8;UBERON:0000974,6.13e-08,10;UBERON:0003408,6.13e-08,10;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11 | |||
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| ||
|short_description=p9@TTYH2 | |short_description=p9@TTYH2 | ||
}} | }} |
Latest revision as of 07:12, 17 September 2015
Short description: | p9@TTYH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TTYH2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000526858_5end |
EntrezGene: | TTYH2 |
HGNC: | 13877 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 4.09e-23 | 3 |
melanocyte | 6.56e-08 | 10 |
melanoblast | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.23e-66 | 1 |
cranial nerve | 1.23e-66 | 1 |
nerve trunk | 1.23e-66 | 1 |
nerve connecting eye with brain | 1.23e-66 | 1 |
nerve | 1.23e-66 | 1 |
retinal neural layer | 1.23e-66 | 1 |
presumptive neural retina | 1.23e-66 | 1 |
neural tissue | 3.61e-34 | 2 |
multi cell component structure | 3.61e-34 | 2 |
neuron projection bundle | 3.61e-34 | 2 |
layer of retina | 7.35e-18 | 4 |
thymus | 8.69e-18 | 4 |
hemolymphoid system gland | 8.69e-18 | 4 |
thymic region | 8.69e-18 | 4 |
pharyngeal gland | 8.69e-18 | 4 |
thymus primordium | 8.69e-18 | 4 |
retina | 2.19e-12 | 6 |
photoreceptor array | 2.19e-12 | 6 |
posterior segment of eyeball | 2.19e-12 | 6 |
pharyngeal epithelium | 2.45e-12 | 6 |
hemopoietic organ | 8.99e-11 | 7 |
immune organ | 8.99e-11 | 7 |
peripheral nervous system | 1.04e-08 | 8 |
neck | 6.13e-08 | 10 |
gland of gut | 6.13e-08 | 10 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |