FFCP PHASE1:Hg19::chr13:100632825..100632879,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:100632825..100632879,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr13:100632825..100632879,- | |description=CAGE_peak_at_chr13:100632825..100632879,- | ||
|id=chr13:100632825..100632879,- | |id=chr13:100632825..100632879,- | ||
|ontology_enrichment_celltype=CL:0002319!1.08e-12!25;CL:0000133!1.10e-08!59;CL:0000047!5.13e-08!8;CL:0000243!5.05e-07!15;CL:0000125!5.05e-07!15;CL:0000030!5.05e-07!15;CL:0000339!5.05e-07!15;CL:0000095!5.90e-07!17;CL:0000123!5.90e-07!17;CL:0000128!8.27e-07!7;CL:0000126!8.27e-07!7;CL:0000127!8.27e-07!7;CL:0002453!8.27e-07!7 | |ontology_enrichment_celltype=CL:0002319!1.08e-12!25;CL:0000133!1.10e-08!59;CL:0000047!5.13e-08!8;CL:0000243!5.05e-07!15;CL:0000125!5.05e-07!15;CL:0000030!5.05e-07!15;CL:0000339!5.05e-07!15;CL:0000095!5.90e-07!17;CL:0000123!5.90e-07!17;CL:0000128!8.27e-07!7;CL:0000126!8.27e-07!7;CL:0000127!8.27e-07!7;CL:0002453!8.27e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002319;1.23e-18;25!CL:0000540;9.54e-10;6!CL:0000404;9.54e-10;6!CL:0002322;1.39e-09;5!CL:0000128;2.54e-09;7!CL:0000126;2.54e-09;7!CL:0000127;2.54e-09;7!CL:0000095;6.91e-09;17!CL:0000243;1.46e-08;15!CL:0000125;1.46e-08;15!CL:0002321;7.50e-07;15!CL:0002603;7.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.90e-19,25;CL:0000133,3.61e-15,59;CL:0000047,2.93e-13,8;CL:0000221,4.53e-11,72;CL:0000540,7.91e-10,6;CL:0000031,7.91e-10,6;CL:0000404,7.91e-10,6;CL:0002322,1.28e-09,5;CL:0000128,1.73e-09,7;CL:0000126,1.73e-09,7;CL:0000127,1.73e-09,7;CL:0002453,1.73e-09,7;CL:0000095,6.42e-09,17;CL:0000123,6.42e-09,17;CL:0000243,1.34e-08,15;CL:0000125,1.34e-08,15;CL:0000030,1.34e-08,15;CL:0000339,1.34e-08,15;CL:0000333,9.67e-08,41;CL:0002603,7.50e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;9.54e-10;6!CL:0000339;1.46e-08;15!CL:0000133;1.46e-07;59!UBERON:0006215;3.99e-07;3 | |||
|ontology_enrichment_disease=DOID:162!6.63e-29!235;DOID:14566!2.29e-27!239;DOID:0050687!8.86e-27!143;DOID:305!5.04e-19!106;DOID:0050686!3.73e-10!137;DOID:299!2.18e-08!25 | |ontology_enrichment_disease=DOID:162!6.63e-29!235;DOID:14566!2.29e-27!239;DOID:0050687!8.86e-27!143;DOID:305!5.04e-19!106;DOID:0050686!3.73e-10!137;DOID:299!2.18e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.51e-36!82;UBERON:0005743!1.38e-34!86;UBERON:0000073!1.92e-34!94;UBERON:0001016!1.92e-34!94;UBERON:0000955!1.57e-26!69;UBERON:0006238!1.57e-26!69;UBERON:0002346!3.81e-24!90;UBERON:0001049!1.58e-23!57;UBERON:0005068!1.58e-23!57;UBERON:0006241!1.58e-23!57;UBERON:0007135!1.58e-23!57;UBERON:0002616!1.56e-22!59;UBERON:0003075!1.20e-21!86;UBERON:0007284!1.20e-21!86;UBERON:0000924!1.30e-19!173;UBERON:0006601!1.30e-19!173;UBERON:0004121!1.20e-17!169;UBERON:0000033!3.46e-16!123;UBERON:0000153!2.30e-14!129;UBERON:0007811!2.30e-14!129;UBERON:0001893!7.30e-14!34;UBERON:0002020!9.05e-14!34;UBERON:0003528!9.05e-14!34;UBERON:0002780!1.47e-13!41;UBERON:0001890!1.47e-13!41;UBERON:0006240!1.47e-13!41;UBERON:0002791!2.04e-13!33;UBERON:0003076!3.36e-13!15;UBERON:0003057!3.36e-13!15;UBERON:0003056!3.74e-13!61;UBERON:0003080!5.67e-13!42;UBERON:0001869!1.14e-12!32;UBERON:0004732!2.40e-12!13;UBERON:0004733!1.61e-11!12;UBERON:0002028!1.61e-11!12;UBERON:0007277!1.61e-11!12;UBERON:0000956!3.45e-11!25;UBERON:0000203!3.45e-11!25;UBERON:0002680!3.08e-09!9;UBERON:0001895!3.08e-09!9;UBERON:0010092!3.08e-09!9;UBERON:0002619!5.07e-09!22;UBERON:0001950!8.99e-08!20;UBERON:0002037!1.69e-07!6;UBERON:0006215!1.69e-07!6 | |ontology_enrichment_uberon=UBERON:0001017!3.51e-36!82;UBERON:0005743!1.38e-34!86;UBERON:0000073!1.92e-34!94;UBERON:0001016!1.92e-34!94;UBERON:0000955!1.57e-26!69;UBERON:0006238!1.57e-26!69;UBERON:0002346!3.81e-24!90;UBERON:0001049!1.58e-23!57;UBERON:0005068!1.58e-23!57;UBERON:0006241!1.58e-23!57;UBERON:0007135!1.58e-23!57;UBERON:0002616!1.56e-22!59;UBERON:0003075!1.20e-21!86;UBERON:0007284!1.20e-21!86;UBERON:0000924!1.30e-19!173;UBERON:0006601!1.30e-19!173;UBERON:0004121!1.20e-17!169;UBERON:0000033!3.46e-16!123;UBERON:0000153!2.30e-14!129;UBERON:0007811!2.30e-14!129;UBERON:0001893!7.30e-14!34;UBERON:0002020!9.05e-14!34;UBERON:0003528!9.05e-14!34;UBERON:0002780!1.47e-13!41;UBERON:0001890!1.47e-13!41;UBERON:0006240!1.47e-13!41;UBERON:0002791!2.04e-13!33;UBERON:0003076!3.36e-13!15;UBERON:0003057!3.36e-13!15;UBERON:0003056!3.74e-13!61;UBERON:0003080!5.67e-13!42;UBERON:0001869!1.14e-12!32;UBERON:0004732!2.40e-12!13;UBERON:0004733!1.61e-11!12;UBERON:0002028!1.61e-11!12;UBERON:0007277!1.61e-11!12;UBERON:0000956!3.45e-11!25;UBERON:0000203!3.45e-11!25;UBERON:0002680!3.08e-09!9;UBERON:0001895!3.08e-09!9;UBERON:0010092!3.08e-09!9;UBERON:0002619!5.07e-09!22;UBERON:0001950!8.99e-08!20;UBERON:0002037!1.69e-07!6;UBERON:0006215!1.69e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004732;5.29e-16;13!UBERON:0004733;1.32e-14;12!UBERON:0002028;1.32e-14;12!UBERON:0002680;6.40e-13;9!UBERON:0001895;6.40e-13;9!UBERON:0002037;2.55e-12;6!UBERON:0001016;3.39e-09;83!UBERON:0001017;1.24e-07;75!UBERON:0000955;4.58e-07;68!UBERON:0000073;7.05e-07;53!UBERON:0002616;7.05e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.76e-29,89;UBERON:0001017,2.87e-27,81;UBERON:0004121,1.65e-18,171;UBERON:0000924,1.65e-18,171;UBERON:0006601,1.65e-18,171;UBERON:0004732,5.72e-16,13;UBERON:0003076,1.08e-15,15;UBERON:0003057,1.08e-15,15;UBERON:0000955,1.13e-15,68;UBERON:0006238,1.13e-15,68;UBERON:0002346,3.15e-15,86;UBERON:0004733,1.67e-14,12;UBERON:0002028,1.67e-14,12;UBERON:0007277,1.67e-14,12;UBERON:0003075,5.35e-13,82;UBERON:0007284,5.35e-13,82;UBERON:0002680,8.19e-13,9;UBERON:0001895,8.19e-13,9;UBERON:0010092,8.19e-13,9;UBERON:0002037,2.53e-12,6;UBERON:0006215,2.53e-12,6;UBERON:0001049,1.06e-11,56;UBERON:0005068,1.06e-11,56;UBERON:0006241,1.06e-11,56;UBERON:0007135,1.06e-11,56;UBERON:0000073,1.98e-10,53;UBERON:0002616,1.98e-10,53;UBERON:0010371,4.02e-09,104;UBERON:0011216,2.60e-08,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.1410213684537,6.32402142857184,4.70182082217132,5.43848375549008,1.77936752594749,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.38848457835187,3.1042115644759,2.63504357079378,0.982343066232845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4217188423189,2.88087962239999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0.272746120590835,0,3.17131635936948,3.18071443971565,5.46111531486736,4.87206958572241,2.77552935963191,7.66452454059243,0,0,0,0,0,1.53798840051797,0.674338760312407,0,0.330881918197182,0.653638332277218,0.71181185733329,0.674156540800822,0.196221465125346,1.15424147083917,0,0,0,0,0,0,0,0,0.368965315629341,0.514703430895577,0,0,0,0,0,0,1.44331342025273,2.66639931442677,0.821860859650752,0,0,0,1.58040879591855,1.71697232418975,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03671903643299,7.84728123899904,1.6134422880609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19812427745791,3.44585807502342,0,0,0,0,0,0,0,0,6.35236560556159,5.20559415430487,1.54657762555539,1.00509759200609,1.91381625495949,0,0,0,0,0,0.271265023699736,0.415941723061614,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,10.3774613455252,9.95115929051482,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00726411300178,0.495056999523528,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86079184679834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,2.88743956579008,0,0,0.28853842595289,0.569134746787313,0.159426272728822,0,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0.642352300414798,0,0.425846237690326,0,2.15068535015921,2.46043718681657,0.667396566847634,0,1.67043704337145,0,0.270455678475983,0,0,0.561421621224659,0,0.728163130497081,0,1.42068073403207,0,0,0,0,1.82870241333667,0,0.824019371133798,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.716084698702437,0,0,0,0,3.87733098438087,1.48428957058962,0,0.520855522170466,0.174919999992391,0,0.455173793141999,0.254253650292766,0.709163045303809,0.344743373241465,0.583209226766509,1.04174996959975,0.885741385813839,0.844175070377856,35.0937993529291,29.4140831417057,41.9677618914037,2.19385397153973,0.762569244632931,0.83654246567162,0,0,0,0.448788222048861,0,0,0.0915975934018623,0,0,0,0,2.25595660617181,1.9606253431774,1.1747511088309,0.569261198172555,0,0.421996129056054,0.816164040795739,0,0,0,0,0,0.296521128680622,0.494255755786011,0.626531697032732,2.02203398942031,0,0,0.364909578431332,0.586993856796269,2.18502341580683,0,0,1.53036380815245,2.46427660551103,1.65355761355942,4.14752765588989,0.664653872707185,0.992975867626496,2.82539626566503,2.38944859545918,1.99226682220855,0.554698692052555,1.73559738335131,0,0.870592065804026,0.34945333648406,1.54787429224455,0.677294319023596,1.16942907337897,1.06750094169172,0,3.53024506766001,0.90392296312213,0.959293472527256,0.993573058514948,0.633107959558787,0,0.400794101257669,0,0.39961921916426,1.15272333723285,1.14536596165916,0.686379991447858,0.14405479798815,0.621262677827163,0.235694034616795,2.58217991539867,1.35983700206033,0.917983958726896,0.866851769704557,0,0.410716136675979,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0.78741985211799,0,1.59045937961861,2.04305109167363,5.62636019627567,4.95141971750042,2.49264202817511,0,0,0.850493793212345,0.335434687599266,0,0,0.105600336519406,0.537862017998534,1.34340638123612,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.0342636508924,0.92562821219883,0.684347351537318,0.704815022316672,0,0,0,0,0.395223263795889,0.121792598380896,1.27668251554036,0,0,0,0,1.41348686625211,0.886068179966986,0.732157589411779,2.003054891304,4.58727356552057,4.43716206147409,0.931446044120752,0,1.24980407962107,0.151649117541648,0.570930667089935,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,6.00286871519987,0,1.62065732026684,0,0.71635536432595,0.308801447160972,1.53498834705095,0.883445729729405,0.192914038270915,0.337884881306145,1.79369063011563,3.10887307558079,0.303859956177382,1.24432592536558,0,0,0,2.29326894192489,0.983091635014877,0,0,0,0.861074898304078,0.567515953566836,0.184105950251841,0,0,0,0,5.03251013938868,6.00653010056076,2.0367903594483,0.637724760305049,3.59413716351106,2.23457967189298,0,3.94308725006267,0,0,0,0.385375350578757,0,1.11743701340006,0.82046545696302,0.504143392443436,0.96820153449905,1.93770774758221,2.85538840518309,1.47221577751538,1.88751557356385,0,0.924205329202706,0,0.690359926060101,0.596748666348824,0,0.20170506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| ||
|short_description=p@chr13:100632825..100632879,- | |short_description=p@chr13:100632825..100632879,- | ||
}} | }} |
Latest revision as of 14:10, 24 July 2015
Short description: | p@chr13:100632825..100632879, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:100632825..100632879, - |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.90e-19 | 25 |
neurectodermal cell | 3.61e-15 | 59 |
neuronal stem cell | 2.93e-13 | 8 |
ectodermal cell | 4.53e-11 | 72 |
neuron | 7.91e-10 | 6 |
neuroblast | 7.91e-10 | 6 |
electrically signaling cell | 7.91e-10 | 6 |
embryonic stem cell | 1.28e-09 | 5 |
oligodendrocyte | 1.73e-09 | 7 |
macroglial cell | 1.73e-09 | 7 |
astrocyte | 1.73e-09 | 7 |
oligodendrocyte precursor cell | 1.73e-09 | 7 |
neuron associated cell | 6.42e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 6.42e-09 | 17 |
glial cell (sensu Vertebrata) | 1.34e-08 | 15 |
glial cell | 1.34e-08 | 15 |
glioblast | 1.34e-08 | 15 |
glioblast (sensu Vertebrata) | 1.34e-08 | 15 |
migratory neural crest cell | 9.67e-08 | 41 |
astrocyte of the cerebellum | 7.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.76e-29 | 89 |
central nervous system | 2.87e-27 | 81 |
ectoderm-derived structure | 1.65e-18 | 171 |
ectoderm | 1.65e-18 | 171 |
presumptive ectoderm | 1.65e-18 | 171 |
segmental subdivision of nervous system | 5.72e-16 | 13 |
posterior neural tube | 1.08e-15 | 15 |
chordal neural plate | 1.08e-15 | 15 |
brain | 1.13e-15 | 68 |
future brain | 1.13e-15 | 68 |
neurectoderm | 3.15e-15 | 86 |
segmental subdivision of hindbrain | 1.67e-14 | 12 |
hindbrain | 1.67e-14 | 12 |
presumptive hindbrain | 1.67e-14 | 12 |
neural plate | 5.35e-13 | 82 |
presumptive neural plate | 5.35e-13 | 82 |
regional part of metencephalon | 8.19e-13 | 9 |
metencephalon | 8.19e-13 | 9 |
future metencephalon | 8.19e-13 | 9 |
cerebellum | 2.53e-12 | 6 |
rhombic lip | 2.53e-12 | 6 |
neural tube | 1.06e-11 | 56 |
neural rod | 1.06e-11 | 56 |
future spinal cord | 1.06e-11 | 56 |
neural keel | 1.06e-11 | 56 |
regional part of nervous system | 1.98e-10 | 53 |
regional part of brain | 1.98e-10 | 53 |
ecto-epithelium | 4.02e-09 | 104 |
organ system subdivision | 2.60e-08 | 223 |