FFCP PHASE1:Hg19::chr13:20532994..20533011,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7750 | |EntrezGene=7750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12989 | |HGNC=12989 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UBW7 | |UniProt=Q9UBW7 | ||
|association_with_transcript=20bp_to_NM_001190965,uc001umt.2_5end | |association_with_transcript=20bp_to_NM_001190965,uc001umt.2_5end | ||
|cluster_id=chr13:20532994..20533011,+ | |||
|description=CAGE_peak_4_at_ZMYM2_5end | |description=CAGE_peak_4_at_ZMYM2_5end | ||
|id=chr13:20532994..20533011,+ | |id=chr13:20532994..20533011,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.70e-14!42;CL:0000860!1.63e-12!45;CL:0000557!1.90e-11!71;CL:0000766!2.79e-11!76;CL:0000839!1.82e-10!70;CL:0002009!9.71e-09!65;CL:0002194!7.16e-08!63;CL:0000576!7.16e-08!63;CL:0000040!7.16e-08!63;CL:0000559!7.16e-08!63;CL:0000763!9.87e-08!112;CL:0000049!9.87e-08!112 | |ontology_enrichment_celltype=CL:0002057!2.70e-14!42;CL:0000860!1.63e-12!45;CL:0000557!1.90e-11!71;CL:0000766!2.79e-11!76;CL:0000839!1.82e-10!70;CL:0002009!9.71e-09!65;CL:0002194!7.16e-08!63;CL:0000576!7.16e-08!63;CL:0000040!7.16e-08!63;CL:0000559!7.16e-08!63;CL:0000763!9.87e-08!112;CL:0000049!9.87e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.52e-14;33!CL:0002057;5.52e-14;33!CL:0000473;5.03e-10;39!CL:0000234;5.03e-10;39!CL:0000576;7.26e-09;48!CL:0000766;5.56e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.47e-17,42;CL:0002057,1.47e-17,42;CL:0000557,6.69e-17,67;CL:0000766,1.44e-16,72;CL:0000473,1.25e-15,48;CL:0000234,1.25e-15,48;CL:0000839,1.87e-15,66;CL:0002009,5.88e-13,61;CL:0000763,1.83e-12,108;CL:0000049,1.83e-12,108;CL:0002194,1.11e-11,59;CL:0000576,1.11e-11,59;CL:0000040,1.11e-11,59;CL:0000559,1.11e-11,59;CL:0000738,5.39e-09,136;CL:0002031,2.88e-07,120;CL:0000037,6.41e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.48e-12!115;UBERON:0001049!1.10e-11!57;UBERON:0005068!1.10e-11!57;UBERON:0006241!1.10e-11!57;UBERON:0007135!1.10e-11!57;UBERON:0000073!2.65e-10!94;UBERON:0001016!2.65e-10!94;UBERON:0002371!3.27e-10!80;UBERON:0001017!3.38e-10!82;UBERON:0002616!5.20e-10!59;UBERON:0003080!1.18e-09!42;UBERON:0005743!1.28e-09!86;UBERON:0000955!1.54e-09!69;UBERON:0006238!1.54e-09!69;UBERON:0002780!2.74e-09!41;UBERON:0001890!2.74e-09!41;UBERON:0006240!2.74e-09!41;UBERON:0001474!3.88e-09!86;UBERON:0003075!6.40e-09!86;UBERON:0007284!6.40e-09!86;UBERON:0002346!9.15e-09!90;UBERON:0002020!2.62e-08!34;UBERON:0003528!2.62e-08!34;UBERON:0001893!1.14e-07!34;UBERON:0002791!1.19e-07!33;UBERON:0003056!1.72e-07!61;UBERON:0001869!4.19e-07!32;UBERON:0004765!5.78e-07!101;UBERON:0001434!5.78e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.27e-15,76;UBERON:0001474,6.83e-13,82;UBERON:0004765,4.86e-12,90;UBERON:0002405,2.43e-11,93;UBERON:0001049,5.92e-10,56;UBERON:0005068,5.92e-10,56;UBERON:0006241,5.92e-10,56;UBERON:0007135,5.92e-10,56;UBERON:0001434,1.31e-09,100;UBERON:0000073,1.86e-09,53;UBERON:0002616,1.86e-09,53;UBERON:0002390,3.01e-09,98;UBERON:0003061,3.01e-09,98;UBERON:0002346,3.93e-09,86;UBERON:0003075,4.29e-09,82;UBERON:0007284,4.29e-09,82;UBERON:0001016,5.38e-09,89;UBERON:0007023,7.57e-09,114;UBERON:0001017,1.26e-08,81;UBERON:0002193,6.49e-08,108;UBERON:0000955,4.22e-07,68;UBERON:0006238,4.22e-07,68;UBERON:0003528,4.64e-07,34;UBERON:0002020,4.64e-07,34;UBERON:0002780,5.50e-07,41;UBERON:0001890,5.50e-07,41;UBERON:0003080,5.50e-07,41;UBERON:0006240,5.50e-07,41 | |||
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| ||
|short_description=p4@ZMYM2 | |short_description=p4@ZMYM2 | ||
}} | }} |
Latest revision as of 18:27, 16 September 2015
Short description: | p4@ZMYM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZMYM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 20bp_to_NM_001190965, uc001umt.2_5end |
EntrezGene: | ZMYM2 |
HGNC: | 12989 |
UniProt: | Q9UBW7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.47e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.47e-17 | 42 |
granulocyte monocyte progenitor cell | 6.69e-17 | 67 |
myeloid leukocyte | 1.44e-16 | 72 |
defensive cell | 1.25e-15 | 48 |
phagocyte | 1.25e-15 | 48 |
myeloid lineage restricted progenitor cell | 1.87e-15 | 66 |
macrophage dendritic cell progenitor | 5.88e-13 | 61 |
myeloid cell | 1.83e-12 | 108 |
common myeloid progenitor | 1.83e-12 | 108 |
monopoietic cell | 1.11e-11 | 59 |
monocyte | 1.11e-11 | 59 |
monoblast | 1.11e-11 | 59 |
promonocyte | 1.11e-11 | 59 |
leukocyte | 5.39e-09 | 136 |
hematopoietic lineage restricted progenitor cell | 2.88e-07 | 120 |
hematopoietic stem cell | 6.41e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.27e-15 | 76 |
bone element | 6.83e-13 | 82 |
skeletal element | 4.86e-12 | 90 |
immune system | 2.43e-11 | 93 |
neural tube | 5.92e-10 | 56 |
neural rod | 5.92e-10 | 56 |
future spinal cord | 5.92e-10 | 56 |
neural keel | 5.92e-10 | 56 |
skeletal system | 1.31e-09 | 100 |
regional part of nervous system | 1.86e-09 | 53 |
regional part of brain | 1.86e-09 | 53 |
hematopoietic system | 3.01e-09 | 98 |
blood island | 3.01e-09 | 98 |
neurectoderm | 3.93e-09 | 86 |
neural plate | 4.29e-09 | 82 |
presumptive neural plate | 4.29e-09 | 82 |
nervous system | 5.38e-09 | 89 |
adult organism | 7.57e-09 | 114 |
central nervous system | 1.26e-08 | 81 |
hemolymphoid system | 6.49e-08 | 108 |
brain | 4.22e-07 | 68 |
future brain | 4.22e-07 | 68 |
brain grey matter | 4.64e-07 | 34 |
gray matter | 4.64e-07 | 34 |
regional part of forebrain | 5.50e-07 | 41 |
forebrain | 5.50e-07 | 41 |
anterior neural tube | 5.50e-07 | 41 |
future forebrain | 5.50e-07 | 41 |